Amphiura filiformis: 140158359
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Entry
140158359 CDS
T10871
Name
(RefSeq) tetratricopeptide repeat protein 37-like
KO
K12600
superkiller protein 3
Organism
afil Amphiura filiformis
Pathway
afil03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
afil00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
140158359
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afil03019
]
140158359
Messenger RNA biogenesis [BR:
afil03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
140158359
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_8
TPR_16
TPR_14
TPR_2
TPR_19
TPR_12
TPR_CcmH_CycH
TPR_17
TPR_9
TPR_30
TPR_11
TPR_6
Spore_III_AB
ANAPC8
BTAD
TPR_7
Motif
Other DBs
NCBI-GeneID:
140158359
NCBI-ProteinID:
XP_072037551
LinkDB
All DBs
Position
8:14173792..14323109
Genome browser
AA seq
2003 aa
AA seq
DB search
MMATGGGSNKEIKSLLKSAREAIRNKEYKEALKHCKGVLKQDKGNYNALVFIGIAAAEMG
QPDQAVMAYKKAIETDSQQLLAWQGLSGFYEKSEKEEHKPELIGTYKSMLDILQGKDQKK
WTETAEKLVQVCIVLGNIKEALTYLKSLIDEASKTKGDPLTYWKQVADILVDQKTLTEED
TTQLQQAYMCILHSSDLDQQDHLKYYSGYIKHLQKSGVDDSEIIKECEKMHELFPNEVMP
LQGLAKIYLKCQPESLESNAVEVYDKLLALQENSGLALLGHGQRKLKDKSYLEARKLLLQ
GTEREKSNVYGWLYLAKSHLGLHDNQAAESSCSEGVKQLKTKKSLQPDVVTNLKKSFSLC
QADALLDSGISNNVQTAIQIYEKFLDGEDSVMLYCKLVQAYVLLQDMTTAQQLCDEAVSK
SSDDSVDVMATQGLLLMGNQKLTEAQQKLIQATQSAGDVGLYHYWLGRVYWEMGEETRKD
KVKYLGSLLKAAKLDPYYSNTFLYLGHYYWQVIQEKSKGKKCYQKAYELNPHNEAAGAAL
GDVYLQTGEEKAAKELYLTVTSEAAAGTAKWAWLRLGLCYLKLGEANNAIASFQAALRAD
PKDRHCWECLGEAYMARGSLTAALKAFTRGTELDPSAVYCMFQIAAIKQSLGAFSEAVAE
YHVILDVSSDYIPALKGQGEAYVCLAKASLQQFFTGRAVDYVQLAVRVLARAARLKPDLA
CVWKLLGDACTLLHPLDSQLVKISVPVSLMEPQQKNGEEMEQTKTELQALGARCYGRAVR
IQGDCASLWHDLGVNYYHQAKDNTNKAQFIVKSLQCLKKAISLDSGNHAHWTALGVVAVD
ANQPKLAQHAFIKSIQSEPQNVVAWTNLGTLYLSEGNATLAHEAFKTSQSLDPAYVQCWI
GQALIAETIGSEETMDLFRHTTELATHMESSIGYAHWVCKTLLDTELDKKSDLFRFNIVQ
MNALPAAMVAIGKYADCAASDPCAHSMFGLLLERQGLYKAAEKVYQRASDLLQETGGKDE
KNLAYANHARTLCMCDRHEEAVKKYQSISPLIEYSDILGLAVALYKMEDFSASYQVKKYQ
SISPLIEYSDILGLAVALYKMEDFSASYQEAVKKYQSISPLIEYSDILGLAVALYKMEDF
SASYQEAVKKYQSISPLIEYSDILGLAVALYKMEDFSASYQEAVKKYQTISPLIEYSDIL
GLAVALYKMEDFSASYQEAVKKYQSISPLIEYSDILGLAVALYKMEDFSASYQGELTIIV
CVIAYEEAVKKYQSISPLIEYSDILGLAVALYRMEDFSASYQEAVKKYQSISPLIEYSDI
LGLAVALYKMEDFSASYQEAVKKYQSISPLIEYSDILGLAVALYKMEDFSASYQEAVKKY
QSISPLIEYSDILGLAVALYKMEDFSASYQEAVKKYQSISPLIEYSDILGLAVALYKMED
FSASYQEAVKKYQSISPLIEYSDILGLAVALYKMEDFSASYQEAVKKYQSISPLIECSDI
LGLAVALYKMEDFSASYQAYEQALQLASNEADKSEILSAMGMVAYKSGNTEQAKTRCSLK
KVGMCCQLSSPSVDGLFALCSLGLVLGDVTLATAAITELQKWQDKEEGETIAVDLGFLSA
MIYALQGHNDLACRQVAKLLKRHSHRGELWNLSAELTLQLSPNQAQKSVSYSKTALETFT
SCKDIPLVNAVCETAAGSPDCLKSAQKSVHLFPDNLNNWATLVASASSKCTWDSHGGIPS
KSNTAAKIARFIYQQATKTGQSKLSNWSAGQVVLSLVQCGRLDEALRFCEKVESDDDIDS
ELNSFLQLLQVEILYLNGLYREGDVTDIQSVRNAVIDKATTSQGWQFLAEVYKNAGLLAA
AEVCYRQALQRVSSNQAVILLRLAHLALTTYKVSEEKEKWLNLAQEAITEALKLKPGNPV
ALLLQGLLHSQNSNVKHAKRSFQQALVASHQPCDFFMRSVARLQLAKILAAKKDQDSIKV
LLQEATEECDPNLKQLQAMAPKD
NT seq
6012 nt
NT seq
+upstream
nt +downstream
nt
atgatggcaactggaggtggaagtaacaaggaaattaaaagtttgctcaagagtgcccgg
gaagcaattcgtaataaggaatacaaggaggccctcaagcactgcaagggagtgttgaag
caagacaaaggtaactacaatgccttggtatttattggaatagcagcagcagaaatgggc
caaccagaccaagctgtcatggcttataagaaagcaatagaaacagattcacaacaacta
ttagcttggcagggattgagtggtttctatgagaaaagtgaaaaagaagagcataagcct
gaattgattggtacctacaagagcatgttggatatacttcaaggcaaagatcagaagaag
tggacagagactgctgaaaaactggttcaagtttgtatagtacttggaaatatcaaagag
gcattgacttacctgaagtcattaattgatgaggcatcaaaaaccaaaggtgacccgctc
acctattggaaacaagttgctgatattctggttgatcagaagactctgactgaagaagac
actacacagctccagcaggcttatatgtgcattcttcattcatctgaccttgatcagcaa
gaccatttgaagtactatagtggctacataaaacacctacagaagtctggtgtagatgac
tctgagattatcaaagaatgtgaaaagatgcatgagttgttcccaaatgaagtcatgcca
ttgcagggtctagccaagatttacctgaaatgtcagccagagtcattggaaagtaatgct
gtagaagtgtatgacaagttacttgcccttcaagagaattctggtttagctctacttgga
catggacaaagaaaattgaaagataaaagctatttggaggccaggaaattacttctacaa
ggcactgaacgtgagaagtccaatgtgtatggttggttgtatcttgccaaatcacacctc
ggtctccatgacaaccaggctgcagaatcatcctgtagtgaaggtgttaagcaactcaag
acgaagaagagcttacaaccagatgtagtcactaacctcaagaagtcattttccctgtgt
caggctgatgccttacttgactctggtataagtaacaatgtacagactgctatccaaatc
tatgaaaagtttctagatggtgaagacagtgtgatgctatactgcaagctggtgcaggca
tatgttttattacaagatatgactacagctcaacagctgtgtgatgaggctgtgtcaaag
tcttctgatgattcagtggatgttatggctactcaaggtcttttactcatgggcaatcag
aaactcactgaagcacaacaaaaactcatccaagctacacaatcagcaggtgatgttgga
ctataccattattggttaggcagagtttattgggagatgggagaagaaaccaggaaagat
aaagtaaagtatctgggctccttgctgaaggctgccaagcttgacccatactacagcaat
acattcttatatctgggacattactactggcaggtcatacaagagaaaagcaaggggaag
aaatgttaccagaaagcatatgaattgaatcctcacaatgaagcagctggagcagcactt
ggggatgtttacctacaaactggagaagagaaagcagctaaggagctgtatctaacagtc
actagtgaggcagctgcaggtactgctaaatgggcttggttaagacttggactgtgttat
ctcaaactaggagaagctaacaatgccatagcaagttttcaagcagctctgagggcagac
ccaaaggatagacactgctgggaatgtcttggggaagcatacatggcaagaggcagtttg
acagcagcactgaaagctttcacaagaggcactgagcttgatccatcagcagtttactgc
atgtttcaaattgcagccattaagcaaagccttggtgcattctcagaagctgtagcagaa
tatcatgtcatattggatgtgtcatcagactatattcctgctctcaaaggacaaggtgaa
gcatatgtgtgtttagccaaggcatcacttcaacagttctttactggacgtgctgtggat
tatgttcaacttgctgtcagggtactggcaagagctgcaagactaaagccagacttggca
tgtgtatggaagctgttaggagatgcctgcaccctacttcatcctctagactcacagctt
gttaagatttcagtgcctgtcagtcttatggagcctcagcagaaaaatggtgaggaaatg
gaacagaccaaaactgagctgcaggctttgggagcaaggtgttatggacgggctgtacgc
attcagggggattgtgctagcttgtggcatgacctaggagtgaactattatcatcaagca
aaggacaacaccaataaagcacaattcattgtgaaatcactgcagtgtttgaagaaagca
ataagtttggatagcggcaatcatgctcactggacagctctaggagtggtggcagtagat
gcaaaccaacctaaactagcacaacatgcatttatcaaatccatacaaagtgaaccacag
aatgtagttgcatggaccaacttagggaccctgtatcttagtgaaggcaatgcaacactt
gctcatgaagctttcaagacctcccagtctctggaccctgcatatgtacaatgctggatt
ggacaggctcttattgctgagaccattggaagtgaagaaaccatggatctcttcagacac
accacagaacttgcaactcatatggagagcagcataggttatgcacactgggtgtgtaag
acattgttggatactgagttggataagaaatcagatttattccgctttaatattgtgcag
atgaatgctctacctgctgctatggtagctattggaaagtatgcagattgtgctgctagt
gatccatgtgcacacagcatgtttggactcttactagagaggcagggcttgtataaagct
gctgaaaaggtgtatcaaagggcatcagacttgctacaggagacaggagggaaagatgag
aagaacttggcttatgctaatcatgcaagaacactatgtatgtgtgatcgccatgaagaa
gcagtcaagaagtaccaatcaatcagcccattaattgagtacagtgacatcctaggtctt
gctgtagctttatacaagatggaggacttctcagcaagttatcaagtcaagaagtaccaa
tcaatcagcccattgattgagtacagtgatatcctaggtcttgctgtagctttatacaag
atggaggacttctcagcaagttatcaagaagcagtcaagaagtaccaatcaatcagccca
ttgattgagtacagtgatatcctaggtcttgctgtagctttatacaagatggaggacttc
tcagcaagttatcaagaagcagtcaagaagtaccaatcaatcagcccattaattgagtac
agtgacatcctaggtcttgctgtagctttatacaagatggaggacttctcagcaagttat
caagaagcagtcaagaagtaccaaacaatcagcccattgattgagtacagtgacatccta
ggtcttgctgtagctttatacaagatggaggacttctcagcaagttatcaagaagcagtc
aagaagtaccaatcaatcagcccattgattgagtacagtgacatcctaggtcttgctgta
gctttatacaagatggaggacttctcagcaagttatcaaggtgagttaactattatagta
tgtgtgatcgcatacgaagaagcagtcaagaagtaccaatcaatcagcccattgattgag
tacagtgatatcctaggtcttgctgtagctttatacaggatggaggacttctcagcaagt
tatcaagaagcagtcaagaagtaccaatcaatcagcccattaattgagtacagtgatatc
ctaggtcttgctgtagctttatacaagatggaggacttctcagcaagttatcaagaagca
gtcaagaagtaccaatcaatcagcccattgattgagtacagtgacatcctaggtcttgct
gtagctttatacaagatggaggacttctcagcaagttatcaagaagcagtcaagaagtac
caatcaatcagcccattgattgagtacagtgacatcctaggtcttgctgtagctttatac
aagatggaggacttctcagcaagttatcaagaagcagtcaagaagtaccaatcaatcagc
ccattgattgagtacagtgacatcctaggtcttgctgtagctttatacaagatggaggac
ttctcagcaagttatcaagaagcagtcaagaagtaccaatcaatcagcccattgattgag
tacagtgatatcctaggtcttgctgtagctttatacaagatggaggacttctcagcaagt
tatcaagaagcagtcaagaagtaccaatcaatcagcccattgattgagtgcagtgatatc
ctaggtcttgctgtagctttatacaagatggaggacttctcagcaagttatcaagcctat
gaacaggccttgcagttagcatctaatgaggctgataaatctgagatcttgtctgcaatg
ggcatggtggcatacaagagtggcaatactgaacaagcaaagacgcgttgctctttaaaa
aaggttggtatgtgttgtcagctatcaagcccaagtgtggatggtctatttgctctgtgt
tctctaggcttagttttgggtgatgtgacattagctactgcagctattacagagctacag
aaatggcaggacaaagaagaaggagaaactattgctgtagatttgggattcttatcagca
atgatatatgcattacagggacataatgacttagcttgtagacaggttgccaagttactg
aaaagacattcccatagaggagagttgtggaatctatcagcagagttaacattgcaattg
tcacccaaccaagcacagaaatcagtttcttacagcaaaacagcattggaaacattcacc
tcctgcaaggatatcccattggtaaatgctgtgtgtgaaactgctgcgggtagtcctgat
tgcctgaagtctgctcagaaatctgtacatctcttcccagacaatcttaataactgggca
acacttgttgcaagtgcctcatcaaaatgtacatgggatagtcatggaggaatccccagt
aaatctaatacggctgcaaagattgcacgatttatatatcaacaagcaacaaagactggt
cagagtaagttgtcaaattggtcagctggtcaagttgtcctgagtttggtgcaatgtgga
cgcttggatgaggcactgcgtttctgtgaaaaggttgaatctgatgatgatatagacagt
gaattgaattccttcttacaactccttcaagttgagatcttgtatttaaatggtttatac
agagagggggatgtgacagatatccagtcagtaaggaatgctgtgatagacaaggctaca
acatcacaaggatggcagtttttggcagaagtgtacaagaatgctggtctacttgctgct
gctgaagtgtgttaccgacaggccctccagagggtgtcttccaaccaggctgttatattg
cttaggctagcacatcttgctctcaccacatacaaagtgtcagaagaaaaagaaaaatgg
ttgaatttagcacaggaagctattacagaagccttgaaactaaagcctggaaatccagtg
gcattgttattacaaggattgttacactcacaaaattcaaatgtaaaacatgccaaacgt
agtttccagcaagccttggtggcatctcatcaaccctgtgatttcttcatgagatcagta
gctcgattacaacttgccaagatacttgctgcaaagaaggatcaagactcaatcaaggtt
ttactgcaagaagcaacagaagaatgtgaccccaacttgaagcagcttcaggcaatggca
cctaaagactaa
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