Amphiura filiformis: 140158543
Help
Entry
140158543 CDS
T10871
Name
(RefSeq) putative elongator complex protein 1
KO
K11373
elongator complex protein 1
Organism
afil Amphiura filiformis
Brite
KEGG Orthology (KO) [BR:
afil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
afil03016
]
140158543
Transfer RNA biogenesis [BR:
afil03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
140158543
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_ELP1_1st
A-sol_ELP1
Beta-prop_ELP1_2nd
HB_ELP1
TPR_ELP1
TPR_GEMI5
Beta-prop_EML_2
Beta-prop_NUP159_NUP214
PQQ_3
PQQ_2
Clathrin
Motif
Other DBs
NCBI-GeneID:
140158543
NCBI-ProteinID:
XP_072037766
LinkDB
All DBs
Position
8:complement(5852344..5917014)
Genome browser
AA seq
1351 aa
AA seq
DB search
MRNLELVQCHRIQGIPELKHTSCISVDCDTGRVYLATDDGSVVCLDPQAQQVQWHISLVE
QGYLTVGDSTGHIIDIQHLPDQMSVCMATSNGDVLLYNTVVFELECVGSVASGLTSMTWS
PDQELVVLTTGADTIILMTKEFDPVIETTMNPEEFGEQKPITVGWGKKETQFHGSEGKQA
ATKKAEEVKPALPWDDLKVRVSWRGDGQYFVVSAVNQQSGARKLRTWNRECVLQFTSEDV
NGLEQALCWKPSGSVIASSQRLPHQHDIVFFEKNGLRHGEFTLPFDKMQVKVNEVSWNSE
SSVLAVLLQDLPQTVAETSSDGKESEVTPKSYIQLWTVGNYHWYLKQSLHFPACHDEKIV
AMHWDPEHAYRLHVVCQGGQYLQYTWSWATNCSVGQDSLDNANVAVIDGKQVLITPFRRM
VVPPPMAAYSLQLAGPVNQVLFAPPLHSNDIATLMEDGRIAFYRARDDTDGDSVDGSIKL
MAAGGNGFKVRVKPPVFKGVYSIVDDSGKDFTHEYPLHLHHFCWMQPDTIVAASTDAGGA
GTTLYHMTIKDEEKQLAIRSQDTIFGEVFRICSHHSTGRLAIQLADGSVVDTDNQPITQL
PQPCVHMAMCTIGGQDVVLGLTERYRFYVNDTEVASDCTSFLVHDEFLLLTTHSHTCRAI
SLNTSLNDLYSLSQGKSVSVDETIRRVERGSRIVTAVPDHTKLILQMPRGNLETIHPRPL
VLSAVKKLLDKLEFQKAFDILQRHRISMNIICDHNPKTFLETLDIMVTQLDSANNLNLFL
ADLKEEDVTETMYSAAYRGVARDSKTVYKSNKVDVICDAVRESIQRVDAGKFFLSTLTTH
VKKNTPELETALQKIQMLRDNPSGLDGAPSADEALKYILYLVDVNQLFDVALGTYDFSLV
IMVAEKSQKDPKEYLPFLNHLQRLETNYQCYSIDRHLKRYSKALQHIAKCPNQFIECLAL
VREHKLYSQAMDLFPKGSVHFKEIVNAYAEYLTEKQHTSEAALMYTLCDQWEQALELYKL
SGHWQQAFCMAGKLGFQQDQIAQLANSIAVYLINHSRRTEAANVLLEYTNNVEEAIVTLI
AEQQWDEALRVMHKYNRTDFVETNLKPALTESFSMHIASLENYTTVFERHKSRLAVVRQL
KEQARLEMLEGDVNDTNADLYSDTSSMTGSVTSSRSGMTGSVTSSRSGYSAYTAYSSSTA
KIAGRSSKNRRKAERKKHSLREGSALEDVALLEALGTIIRNVDNLKGDVGKLLSALVLHG
YRPQALQLQRLLGDTLKMMEKSIPEIWQPEMENFPMFGQSFGPQSTSAAIAAAAINQGGA
RKLPSPDDIAIFVPPKISKDETWKMHVLDTR
NT seq
4056 nt
NT seq
+upstream
nt +downstream
nt
atgcgtaatcttgagctagttcaatgtcatcgcatccagggcatcccagaactcaaacat
acctcttgcatcagtgtagactgtgacacagggcgagtctatctggcaactgatgatggc
agtgttgtatgtctggaccctcaagctcagcaggtacaatggcatatatcattggttgag
caaggctacctaacagtaggagatagcacaggtcatatcatagatattcagcatttgccg
gatcagatgtctgtttgcatggcaacaagcaatggagatgtattgctgtataacaccgtt
gtatttgagctggaatgtgttggtagtgttgccagtggccttaccagtatgacatggagt
cctgaccaggagttggttgtcctcacaacaggtgctgacacaatcattttaatgaccaag
gaatttgatcctgtcattgagaccaccatgaatcctgaagagtttggtgaacaaaagcct
atcactgttggctgggggaagaaggaaactcaattccatgggtcagagggcaaacaagcg
gcaacaaagaaagctgaagaggtcaagccagcactgccttgggatgacctcaaggtcagg
gtcagctggaggggtgatggtcagtactttgtggtcagtgctgtcaatcaacaaagtggt
gctcgtaaattaaggacatggaacagagaatgtgttttacagtttacaagtgaagatgtg
aatggtctggaacaagctctctgttggaaaccttcaggaagtgtgattgcttcaagccag
agattaccacatcaacatgacatagtattctttgagaagaatggattgagacatggggaa
ttcactctgccatttgacaagatgcaagttaaggtgaatgaagtatcctggaatagtgag
tcatcagtactagctgtattattacaagatctaccacagactgtagcagagactagtagt
gatggcaaggagagtgaagttactccaaaaagctatattcaattgtggacagtaggcaac
taccattggtacctgaagcagagtcttcatttccctgcttgccatgatgagaaaatagtt
gctatgcattgggacccggaacatgcatatcgtctacatgttgtatgccaaggtggccag
tatttgcagtatacatggtcatgggccactaattgtagtgtgggccaagattcattggat
aatgctaatgttgctgtgattgatggaaagcaagttttgatcaccccttttcgtaggatg
gtagtgcctccacctatggcagcgtattctcttcaattagcaggacctgtcaatcaagta
ctgtttgctccacctcttcatagcaacgacatagcaacattaatggaggatggcaggata
gccttttacagagccagggatgatacagatggcgactcagttgatggcagtattaagctt
atggcagctggtggcaatggattcaaagtcagggtcaaaccgcctgttttcaaaggtgta
tacagtattgtagatgattcggggaaggactttactcatgaatacccattacatcttcat
catttctgctggatgcagcctgataccatagtagcagcatcgactgacgcagggggtgca
ggaaccacattgtatcacatgacaattaaagatgaagaaaaacaactagccatcagatct
caagataccatatttggtgaggtattcaggatatgcagtcatcatagtacaggcagatta
gctatacaacttgctgatggttcagttgtggatacagacaaccagccaatcacacagcta
ccacagccatgtgttcatatggcaatgtgtacaataggaggacaagatgttgtgttaggt
ttaacagagaggtacagattctatgtcaatgatacagaagtggcttcagattgtacatca
tttctcgtccatgatgaattcctactactcacaactcatagccatacgtgtagagctatt
agccttaatacaagtctcaatgatttgtactccctctcacaaggcaaatctgtctctgtg
gacgagaccatccgccgtgtagagcgtggatccaggatagtcacagccgttccagaccac
actaaactgatccttcagatgccaagaggcaacctggaaaccattcatccaagaccatta
gtcctgtcagcagtgaagaagttactggataaactagagtttcagaaagcttttgatatt
ctgcaaaggcataggattagtatgaatattatttgcgatcacaatccaaagacatttctg
gaaactctggacatcatggtcacccaactagactctgccaataatctcaacttgttcctg
gctgatttaaaagaagaagatgtgacagagactatgtattctgcagcctatagaggagta
gcaagagatagcaagactgtgtataagtctaacaaggtggatgtcatctgtgatgctgtc
agagagagtatacaaagagtggatgcaggaaaattcttcttgtcgacactgaccactcat
gtgaagaagaacacccctgaattagaaacagctcttcagaagatccagatgttacgagat
aatccctctggtttggatggagcgccctcagctgatgaagcattgaagtacattttatac
ctggtagatgttaatcagctgtttgatgtagcactggggacatatgattttagtctagtc
ataatggtggctgagaaatcacaaaaggatccaaaagagtacctaccattcctgaaccac
ctccagaggcttgaaaccaactaccaatgctactcaatagacagacatctaaagagatat
agtaaagctttacaacatatagccaagtgtcccaatcagttcattgaatgcttggcactc
gtcagggaacataagctttacagtcaggctatggatttatttcctaaaggatctgtgcat
tttaaggagatagtgaatgcatatgcagagtatttaacagaaaagcagcatacttctgaa
gcagccttgatgtacaccttatgtgatcagtgggagcaagcattggagttatacaaactc
agtgggcattggcaacaagcattctgtatggctggtaaactagggttccaacaagatcag
atagcccaactagccaatagcatagcagtttacctaatcaatcacagcagacgtacagaa
gcagctaatgtcctacttgaatataccaacaatgttgaggaagccattgtcacacttata
gctgaacagcagtgggatgaagcacttagagtgatgcataaatacaaccgtactgatttt
gttgaaacaaacttgaaaccagccctcacagagtcctttagtatgcatatagccagccta
gaaaactacaccaccgtgtttgagagacacaaatcacgactagccgttgtccgtcaactc
aaagagcaggcccgcctggagatgttagagggtgatgtaaacgacactaatgctgacctg
tattctgataccagtagtatgacaggaagtgttactagcagtagatcaggtatgacaggg
agcgttactagcagtagatcagggtatagtgcatacactgcttatagtagtagcactgca
aagattgcagggcgttcatctaagaatcgtaggaaagcagagcgcaagaagcacagtctt
cgagagggaagtgcattggaagatgtggctctactggaagctttaggaacaattatcagg
aatgtagataatcttaaaggtgatgttggtaaactgctatcagctctagtccttcatggg
tacagacctcaggcattacaattgcagagattactaggtgataccttgaaaatgatggag
aaatccattcctgaaatatggcaacctgagatggaaaacttcccaatgtttggacagagc
tttgggcctcagtctacatcagctgcaattgctgcagcagccatcaaccaaggtggagcc
agaaaactaccatcaccagatgatatagccatatttgtgccacctaaaatcagcaaagat
gaaacatggaagatgcatgtgctggacaccaggtga
DBGET
integrated database retrieval system
