KEGG   Amphiura filiformis: 140158624
Entry
140158624         CDS       T10871                                 
Name
(RefSeq) splicing factor 3B subunit 1-like isoform X1
  KO
K12828  splicing factor 3B subunit 1
Organism
afil  Amphiura filiformis
Pathway
afil03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:afil00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    140158624
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:afil03041]
    140158624
   03036 Chromosome and associated proteins [BR:afil03036]
    140158624
Spliceosome [BR:afil03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    140158624
 Complex B
    140158624
 Complex C
   U2 SnRNP specific factors
    140158624
Chromosome and associated proteins [BR:afil03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    140158624
SSDB
Motif
Pfam: SF3b1 PPP2R1A-like_HEAT HEAT_EZ TOR1L1_N HEAT_EF3_N HEAT_ECM29 Htt_N-HEAT_1 HEAT_2 XMAP215_CLASP_TOG CEP104-like_TOG
Other DBs
NCBI-GeneID: 140158624
NCBI-ProteinID: XP_072037886
LinkDB
Position
8:complement(12198211..12244164)
AA seq 1374 aa
MAAISREDIARQIQQIQSQTTALRQDGNQQVANGGVNGATEAERIGFAERGHYDRELYDA
AQTPRSKYEGYDLSIATNEADDDDDDYSSNTALMGRNTYTAPSSLFNETQEAGKDYEPFA
EHRRPTIADREDPYRERRRLAIISPARHDPFADGGKTPDPTHQTYADILRGQNISKTEVN
YRQQMQERVKKGELRVQQQPAKAVKRRRWDQMGGDTPSTPAGPGGEGATPKKAKGTSWDQ
AEANTPSISRWDETPGRTKGGETPGATPGQTPGAATPGHVTPGRATPGRAGATPTSHTPG
ATPSASTRVWEATPGHVTPGHVTPGHATPGHVTPGHATPGRATPGSRKNRWDETPRTERE
TPGHAGWAETPRTDRVGDAPHETPTPGGKRRSRWDETPAGSQTPMTPRTPATGGGTPLMT
PSGKTPVGPSAMGMVTPSSTALRIMTPEQLQAWRWEKEIDERNRPWSDEELDAMFPEGYK
VLQPPAGYVPIRTPARKLTATPTPMGGMGGVGGFHMQQEGSTVDPGLAQPPGNLPFLKPD
DTQYFGKLLNDVDESTLSAEEAKERRIMKLLLKIKNGTPPMRKAALRQITDKAREMGAGP
LFNQILPLLMSPTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYAR
VEGREIISNLAKAAGLATMISTMRPDIDNLDEYVRNTTARAFAVVASALGIPSLLPFLKA
VCKSKKSWQARHTGIKIVQQIAILMGCAILPHLRNLVEIIEHGLVDDQQKVRTITALALA
ALAEAATPYGIESFDSVLKPLWKGIRQHRGKGLAAFLKAIGYLIPLMDPEYANYYTREVM
LILIREFQSPDEEMKKIVLKVVKQCCATDGVEAQYIRDEVLPSFFKHFWQHRMALDRRNY
RQLVDTTVELANKVGAAEIIGRVVDDLKDEAEQYRKMVMETIEKVMANLGSADIDSRLEE
QLIDGILYAFQEQTTEDSVMLNGFGTVVNALSKRVKPYLPQICGTILWRLNNKAAKVRQQ
AADLISRIAVVMRTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKSIVNVIGMHKMT
PPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEYVSAREWMRICFELLELLKAHK
KAIRRATVNTFGYIAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLP
ALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTACA
AIKHMSLGVFGFGCEDALIHLLNFVWPNIFETSPHVIQAVMDAIEGLRVGIGPNKMMHYT
LQGLFHPARKVRDVYWKIYNTLYIGAQDALVAGYPRVTNDEKNQYVRYELEYFL
NT seq 4125 nt   +upstreamnt  +downstreamnt
atggccgcgatatctcgggaagatattgcacggcagatccagcaaatccaatcacagacc
acagcgctccgtcaggatggcaaccaacaggtggccaatggaggtgtgaatggagcaact
gaggcagagagaataggcttcgcggagagaggtcactatgacagagaattgtatgatgca
gctcagacaccacgtagcaaatatgaaggatatgatttgtccattgcaaccaatgaagca
gacgatgatgatgatgactatagtagtaatacagctttgatggggagaaacacctacaca
gccccatcatcactgtttaatgagacgcaagaagctggaaaggattatgagccttttgca
gagcatcgtcgtccaacaatagctgatcgtgaagatccctacagagagaggaggaggctg
gccatcatttcaccagctagacatgatccttttgcagatggtgggaagacgccagatcca
acacaccagacttatgccgacattttgaggggacagaatataagcaaaacagaggtcaat
tacagacagcagatgcaagagagggtcaagaagggagaacttcgtgtccaacagcaaccg
gcaaaagcagttaagcgcagaagatgggatcagatgggaggggacacaccctccacacct
gctggtccaggaggtgaaggagccacacccaagaaagccaagggcaccagttgggatcaa
gcggaggcaaacacgccttcaattagccgttgggatgaaacaccaggacgaactaaaggt
ggtgagacccctggtgccacacctgggcaaacaccaggagcagcaacccctggacatgta
acccctggccgtgccacccctggacgagcaggtgccacacctacctcccatacaccagga
gctactcccagtgccagtaccagagtgtgggaagccacaccaggtcatgtgactccaggt
catgtgacccctggtcatgctacaccaggccatgtgacccctggtcatgccaccccagga
agagcgactccaggctcaaggaaaaacagatgggatgaaacaccaagaactgagagagaa
acacctggtcatgctggctgggcagaaactccacgtacagaccgtgtcggggatgcacca
cacgagactccaacaccaggaggcaaacgcagatccagatgggatgagacaccagctggt
agccagacacccatgaccccaaggacaccagcaacaggaggaggaacacctcttatgacc
cctagtgggaaaaccccagtgggacctagtgctatgggaatggtcacaccttcctcaact
gcattacgtatcatgactccagagcagctgcaagcctggcgatgggagaaagagatagat
gaaaggaacagaccctggtctgatgaggaactagatgctatgtttccagaaggatacaag
gttttacagccaccagcaggttacgttccaatccgtaccccggccagaaagctgacagcc
accccaaccccgatgggtggtatgggcggcgttggaggattccatatgcaacaagaaggc
tccacagtagatccaggactagcacaaccaccaggcaacctgccattcttgaagcctgat
gacacacagtattttggcaaactattgaatgatgttgacgagagtacattgagtgctgaa
gaagccaaagaaagacgcatcatgaaactactgctcaaaatcaagaacggcacaccacct
atgcgtaaggctgccctgcgacagatcacagacaaggcacgcgagatgggcgctgggcca
ctcttcaaccagattctgccattgcttatgtcaccgacattggaagatcaagagcggcat
ctgttggtgaaggttattgatcgtattctgtacaaattggatgatcttgtcagaccctat
gtgcacaagattcttgtggtcattgaacccctccttattgatgaagattactacgcccgt
gtggaaggccgtgagatcatctccaacttggccaaggctgccggtcttgccaccatgatc
tccacaatgcgtcctgacattgacaacttggacgagtatgtgcgtaacacaacagccaga
gcttttgcggtggttgcatctgctctcggtatcccgtctctactgcctttcttgaaggct
gtgtgtaagagtaagaaatcttggcaggctaggcatactggtatcaagattgtacaacag
attgccatcctgatgggatgtgcgatcttacctcatctgagaaacttggtggaaattatt
gaacatggtcttgttgatgaccaacagaaagtacgtaccatcacagctttggctttggct
gccctggcagaagcagctacaccatacggtattgaatcctttgatagtgtactgaaacca
ttgtggaaaggtatcaggcaacatagaggaaagggtcttgctgccttcttgaaagccatt
ggttatctcattccattgatggatcctgagtatgctaactattataccagggaagtgatg
ttgattctaatccgtgagttccagtctcctgatgaggaaatgaagaagatcgtcttgaag
gtggtgaagcagtgttgtgccactgatggtgtggaagctcaatacatccgtgatgaggtg
ttaccgtcattcttcaaacatttctggcaacatcgtatggccttggataggagaaattac
agacagttggtagacaccacagtagaactagccaacaaagtgggagcagctgaaatcatt
ggacgtgttgtagacgacctgaaagatgaggctgagcagtatcgtaaaatggtgatggag
accatcgagaaagtcatggcaaaccttggctcggccgacatagattcacgtctagaggaa
cagcttattgatggtatcttgtatgccttccaggagcagaccacagaggactctgtgatg
ttgaatggttttggtacagttgtgaatgccctgagtaaacgagtgaagccatacttgcca
cagatctgtggtaccattctatggcgtctcaacaacaaagcagccaaagtaagacagcag
gcagcagatcttatctccagaatcgctgtggttatgagaacgtgtcaagaggagaaactt
atgggtcatttaggtgtagtgttatacgagtacctgggagaagaataccctgaagtattg
ggcagcatcctgggtgctctcaagtcaattgtcaatgttattggtatgcataagatgact
ccgcccatcaaagatctcttaccaaggctaacacccatcttgaaaaacagacatgagaaa
gtgcaagagaactgcatagatttagttggtcgtattgcagacaggggagccgagtatgta
tcagccagagaatggatgagaatatgttttgaattactagaactacttaaagcacacaag
aaagctatcagaagagctactgtcaacacatttggttacattgccaaagctatcggtcca
catgatgtactcgccacactcctcaacaacctcaaagtccaagaaagacagaatcgtgta
tgtaccacagtagctattgccattgtggcagagacttgttcacctttcaccgtactaccg
gcattgatgaatgagtatagagttccagaactgaatgttcagaatggcgtactgaaatcg
ttatcgttcttgtttgagtacattggtgagatgggtaaagattatatttatgccgtcacc
cctctactggaagatgcattgatggacagagatcttgtccatagacagacagcatgtgca
gctatcaaacacatgtcactaggagtatttggttttggttgtgaagatgcactcatacat
ctcttgaactttgtgtggcctaacatatttgagacatcccctcatgtcatacaagctgta
atggatgccatagaagggcttagagtaggcattggtcccaacaaaatgatgcattacaca
ttacagggattgtttcatccagcaaggaaagtgagggatgtctattggaagatctacaac
acattgtacataggagcccaagatgcacttgttgcaggctacccaagagtcaccaatgat
gaaaagaaccaatatgtcagatatgaactggaatatttcttatag

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