Amphiura filiformis: 140159039
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Entry
140159039 CDS
T10871
Name
(RefSeq) sodium channel protein 1 brain-like
KO
K04843
voltage-gated sodium channel type XI alpha
Organism
afil Amphiura filiformis
Brite
KEGG Orthology (KO) [BR:
afil00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
afil04040
]
140159039
Ion channels [BR:
afil04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
140159039
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
Na_trans_assoc
IQ_SCN5A_C
GPHH
Motif
Other DBs
NCBI-GeneID:
140159039
NCBI-ProteinID:
XP_072038467
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Position
8:41134386..41179453
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AA seq
2014 aa
AA seq
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MSSPSTSRRSSSLIETFGNPNYRPLTAQSLKNLERRYVQAKEKEKQRTLSRVSMLSVIEE
EEEAEGRVPDVDLLDGKAAPQKLGKFPKKLYGKPIEELDDARSIDRTFNVVGRRFKSSSI
YRFSSTRSCYIFAPINPIRRFTLLLLTNQFFDIVVMFTILANCIFLALDQPRFKAPGQTQ
PPQSKPAYLKIAEYVFTAIYSFEMFVKIIARGFILEKFTYLRDPWNWLDFCVILLAYVTF
TLEGLNLNVGNFSGLRTFRVLRALKTISVVPGLKSIINALLRSTKMLAEVLLLTVFVLAI
FALLALQLFMGTLRHKCVVDYDITINNDSETAWSLHVMDENNWYKRFDEPLVCSNISAIG
VNNNKSTGWSGCPLNYTCLKGVGDNPNFGYTSFDNFGWAMITSFQLITLDYWEDVYNQII
RATGPWSMFFFFMTVMFGSFYLINLMLAVVSMAYTEEMENQGKEKEMEAERQKKQNVMEL
NPEKLRKIAERKRKKLEKQREKQALLAAANAGNETSDQPGAVNAGFTGDKQLVVPFTNAD
NTSDNVSRVSANQNTSVENVNGADATEDDAADTTGSTNQEDNDSLEEEGIEDPDKSMGQD
QGPVECCPYKSCCQCCRTNCICSRRAYRYVKKLQYYAGYIILDPLVDLLITICICLNTLF
LSIHHHGIPKSTEDAVERGNLVFTAIFTIECVMKITALDKRYFKNSWNIFDFFIVIMSLV
EIPLTGVEGLSVLRTFRLLRVLKLAQSWTTMRNLLAIIGSTVGAIGNVSVVLIIIIYIFA
IIGMQLFGKDYTAENFPDEGIHPRWNFRDFFHSLMMVFRILCGEWIEPLYDCMRASETGA
CIAVIIATFFCGNVMILNLFLALLLNSFASDSLKNKKEEISRLTLAIDKLKRWFWVAFNC
CVCRRRKCKVGSTESLRNDEKEKDSTNIKPDIVMVVEDDDKISQIISLHDSGKVTTIEMT
RVDTISGEKNNSTLMVHRRISVTGSNGHIMNGHSNPPSRKGSAVSVKEFDRPKSRAAFTD
PAKDSVTTGNGSLKVSRLTPLNGSLSNGSVQNGHVQNGSIVNGSIGNGSISNGSASNGSV
VKSKNAETGEEETSKTKTEVAESDRENEKDEDDRSIKGKDEKDEGEEEEELQEDRVKDCF
PEFMNDYFRRKFPCACCKTPEHSPIMQKWHAFRNAVCFVVEHRFFEWFILVIIFASSITL
TFEDIYLDNNPPMKRALNWLNFAFAMIFIVEMTLKWIGMGFKRYFTNFWCWLDFFIVMIA
VLGILADAIGLSGVGAFRALRTLRALRPLRAISRWQGMKIVVNALTHAIPAIINVVFVIL
CFWLIFSIVGVQFFGGTFYKCLDDDGNKVNLSIVTNVTDCKSMNYSWVNSEINFDNILHG
YVALFQVATFEGWMEVMEDAVDARGVDLQPSRESQPAAYIFFVLFIVVGSFFTLNLFIGV
IIENFNALKRKYEGDSSFDMFLTSNQKNYYQTMRRLGTKKPTKQIKQPTDKIRIFFFNLT
NNTKFEVFIVSIIFFNMVAMMVEHYGMDPAITNVLSYFNIIFTAIFTVECILKLIGLGIY
YFKVPWNLFDFIVVALSLMGIILQDALSNSFVNPTLLRVLRLFRIGRVLRLVKSAKGIRK
LLFALVISLPALLNIGALLTLIIFIFSIVGMSQFGYVRHNEGIDEVVNFETWINSMMLLF
RIASSAGWNDVLEPLMADKAPDCDPNYMGYENGDCGNKYFAIIFFMSFLVISFLVIINMY
IAVILENFGQAHAQEEVGITEDDFVMFYQVWESYDPNASQFINYEYLSEFCDKLENPLRL
AKPNHIKIAGLDLPIYDDCKLHCLDVLFALTKRVLGDVEESADFEDLQNQMAEKFAESFP
DRQNHQPTTTTMQIKKRLTAAKVIQRAYRLYRLKREINKASSIYRQTKSSAGNSRASSAQ
SRRPPSLTVEGAKLDASFNSTFGTTLTLPGQLGLTRTVTPSIPEDIEESTSGVNSVKADA
YRVVAGPEPTVEVVNETNEVRKRPRSGTGGDVQL
NT seq
6045 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcgccatccacttcgcgccgatcctcgtctctgatagagacctttggtaatcca
aattaccgacctcttacagctcaatctttgaaaaacttagaacgtcgctatgtccaagcc
aaagagaaagaaaaacagagaactcttagtagagttagtatgctatcagttattgaggag
gaggaagaagccgaaggacgtgtaccagatgtggatttacttgatggcaaagcagcacca
caaaaactgggaaagttcccaaagaagttatatggaaaacctattgaggaacttgatgat
gcaagatcaatcgacagaacgtttaacgttgttggtcggcgcttcaaaagttcttccatc
tatagatttagttcgacacgatcatgttatattttcgcaccgattaaccctatacgaaga
ttcacgttactattactcaccaatcaatttttcgacatagttgtcatgtttactatttta
gccaattgtatcttcttagcccttgaccagcctagattcaaggcgcctgggcagacgcaa
ccaccccagagtaaacccgcatatcttaaaatagccgaatacgtttttacagcaatttat
tcatttgaaatgtttgtcaaaattatagcaagaggttttatactagaaaaattcacttat
cttcgggatccctggaattggttggatttttgcgtcattttactagcatatgtcacgttt
acactggaaggcttgaacttaaatgtaggcaatttttcgggtcttcggacatttagggta
ctacgagcgctaaaaacaatttctgttgtaccgggtttgaaatctatcatcaacgctctt
ttacgttcaactaaaatgcttgccgaggtactgttgctcacggttttcgtcttagcaata
tttgctctacttgctttacaactcttcatgggcacgctaagacacaaatgtgtagtcgat
tatgatatcacaataaacaacgactctgagacagcatggagcttacatgttatggacgaa
aacaactggtacaaaagatttgatgaacctctagtctgcagtaatatatccgcaataggg
gtgaacaacaacaagtcgactggatggagcggatgccctctaaactacacatgtttaaaa
ggtgtcggcgacaatccaaactttggctatacaagttttgacaatttcggctgggcgatg
atcacaagttttcaacttatcaccctggactactgggaggacgtctataatcagatcatt
cgagcgactggaccatggagtatgtttttctttttcatgaccgtcatgtttggttctttc
taccttatcaatcttatgttggctgttgtgtcaatggcatatacagaagaaatggaaaac
caaggaaaggaaaaagagatggaagcagaaagacaaaagaaacaaaatgtgatggaatta
aatccagaaaaactacgaaaaattgctgaaagaaaacgaaagaaactagaaaaacaaaga
gaaaaacaagcacttcttgccgcggcaaatgccgggaatgaaacctctgaccaacctggt
gctgtgaatgctggatttactggtgacaaacagcttgtggtgccatttactaatgcagac
aataccagtgataacgtctcacgagtatcagcgaatcagaacacttctgttgaaaatgtg
aatggtgccgatgcaaccgaagacgatgctgcagatacaacaggtagtacaaatcaagaa
gataatgatagtcttgaagaagaaggcattgaagatcctgataaatcaatgggtcaagat
caaggtcccgtggaatgttgcccctacaagtcttgttgccagtgctgccgaactaattgt
atctgctcaagaagagcgtatcgatatgtgaaaaagctgcaatactacgccggctacatc
atattggacccgttggtggatctattaatcactatttgcatatgtctcaatactcttttc
ttgagtattcatcatcatggtattccgaagtcgactgaagatgctgtcgaaagaggaaat
ttggtattcacagcaatattcaccattgagtgcgtaatgaagataacagccttggacaag
agatacttcaaaaatagttggaatatttttgatttcttcatcgtcataatgagcctggtg
gagatccctctaacaggtgtggaaggtctaagtgtcctgcgtacattccgtttactaaga
gtactgaagcttgcccagtcttggacgaccatgcgtaatcttctcgcgatcattggcagc
accgttggcgccattggaaatgtatctgttgtgttaataatcatcatctacatcttcgct
atcattggcatgcagctatttggcaaagattatactgcagagaatttccccgatgaagga
atacatccacggtggaattttagagacttttttcattcgcttatgatggttttcaggatc
ctgtgcggcgaatggatagagccactttatgattgtatgagagcatcagaaactggcgct
tgtattgcagttattattgctacattcttctgcgggaatgttatgattctcaacctcttc
ctggcgttgcttttgaactcattcgcctccgattccttgaagaacaagaaagaagaaatt
tcacgtctgacgctcgccatagacaaactcaagcgatggttttgggtggctttcaattgt
tgcgtgtgtcgacgacggaaatgcaaggttggatcgactgagtcgttgcgtaacgacgag
aaagagaaggattctactaacattaaacccgacatagtaatggtcgttgaagacgacgat
aagatctcacagattataagcctgcatgacagtggaaaagtaactacaattgagatgaca
cgggtggatacaatcagcggtgagaagaacaatagcacattaatggtacatcgaagaata
tcagtaacaggatcaaatggtcacatcatgaatggacatagtaatccacctagccgaaaa
ggcagtgctgtcagtgttaaggaattcgacagaccaaaatcacgtgccgcctttactgac
cctgccaaagacagcgtgacaaccggtaacggcagtctcaaagtatccaggttgactcca
ttgaatggcagcctctctaacggaagcgtgcaaaacggtcacgtccaaaacggtagtata
gtcaacggaagcattggaaatggaagtatttcaaatggaagtgcgtcaaacgggagcgtt
gttaaaagtaaaaacgcggaaacaggggaagaagaaacctccaaaacaaaaacagaagtt
gcagaaagtgacagagaaaatgaaaaagatgaagatgacagatctatcaaaggaaaggat
gaaaaagatgaaggagaggaggaagaagagctgcaagaagatcgtgtaaaagactgtttt
ccagaatttatgaatgattattttcgaagaaaatttccatgtgcttgttgtaagacccct
gagcactctcctattatgcagaagtggcatgcatttcgtaatgctgtctgtttcgttgtg
gagcatcgcttctttgagtggtttattctagttatcattttcgccagcagtatcacattg
acttttgaagatatttatctcgacaataatccaccgatgaaacgggctttaaattggctg
aatttcgcttttgccatgatattcatcgttgagatgacgcttaaatggattggaatgggc
ttcaaacgatattttacaaacttttggtgctggctggatttttttattgtcatgatcgca
gtgctgggtattttagctgatgccattggtctgtcaggtgttggagctttcagagctctc
cgtactcttcgtgcattgcgtccacttcgtgcaatttcaagatggcagggcatgaagatc
gtggtaaacgccctgactcatgctattccggctatcatcaacgtcgtatttgtgatcctg
tgcttctggcttatcttcagcatcgttggggttcagttcttcggcggaaccttttacaag
tgcctagatgacgatgggaataaagtcaacctttcgatcgtaacaaatgtgactgattgt
aagagtatgaactactcgtgggtgaactctgaaatcaactttgataatattttacacgga
tacgttgcattgtttcaagtggcaacgtttgagggatggatggaggtgatggaggatgct
gtagacgcacgaggggtggacctacagccttcacgggagagccaaccggctgcctatatc
ttcttcgttttgttcattgtcgttggctcgttcttcacactgaatctcttcattggtgtt
atcattgaaaatttcaatgctctgaaacgaaagtatgagggtgacagttccttcgatatg
ttcctgaccagtaatcagaagaattactatcaaactatgagacgacttggaacaaagaag
ccaactaagcaaatcaaacaacccacggataaaatccggatatttttcttcaatcttaca
aataacaccaaatttgaagttttcatcgtgtctatcatcttttttaacatggtggctatg
atggttgaacactacgggatggatccagccattaccaatgtcctgagttatttcaacata
atctttacggcaatcttcaccgtggaatgcatcttgaaattgatcggtttaggcatctat
tacttcaaagttccttggaacctcttcgattttattgtggtggctctatctttaatgggt
attatactgcaagatgcattgtcaaattccttcgtcaatccaacactgctacgagtcctt
cgtctcttcagaattggacgggtgctacgtcttgtcaaatccgccaaaggtattcgtaag
cttctgttcgcgttggtcatctctttaccggcgctcctcaacataggtgccttgctcacg
ttgataatattcatcttttctattgttggtatgtcacagtttggatatgttcggcataat
gaaggtatagatgaagtggtgaactttgaaacttggatcaacagtatgatgttattgttt
agaatagcttcgtcggcgggctggaatgatgtgctggagccacttatggccgataaggca
cctgattgcgacccaaattatatgggatatgaaaacggggattgtggtaacaagtatttt
gcaattatattcttcatgtcttttctcgtcatttccttcctcgttatcatcaacatgtac
attgccgtgattcttgaaaatttcggccaggctcacgcacaggaagaggtcggtataacg
gaagacgactttgttatgttttaccaagtgtgggagtcgtatgacccaaatgcaagccag
tttataaattatgaatatttatcagaattttgtgacaaattagaaaacccattaagactt
gccaagcctaatcacatcaagattgctggcttagatttaccaatttatgacgactgtaag
cttcattgcttagatgtgttatttgcattaacaaaacgagtattgggtgacgtggaggaa
agtgctgatttcgaagatcttcaaaaccaaatggcagaaaagtttgccgaatcatttcca
gatcgtcaaaaccaccagccaaccacgactacaatgcagattaagaaacgtctcacagct
gccaaagtaattcaaagagcgtaccgtttgtatagactcaaaagagaaatcaacaaagca
tcgagtatatatcgccaaacgaaaagcagtgccggaaactcgcgtgcttcttcggctcag
tcacgaagaccgccaagtctgacagtcgaaggcgctaaactcgatgccagtttcaatagt
acttttggcaccacacttacattacctgggcaattaggcctgacaagaactgttactcct
tccataccagaagatattgaagaaagcacatctggcgtaaatagcgtcaaagcagatgcg
tatagagttgttgcaggtccagaaccaacagtagaagttgtcaatgaaacgaacgaagtc
aggaaaagacctcgtagtggaacaggcggagatgttcagttatag
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