KEGG   Amphiura filiformis: 140159068
Entry
140159068         CDS       T10871                                 
Name
(RefSeq) elongin-B-like
  KO
K03873  elongin-B
Organism
afil  Amphiura filiformis
Pathway
afil04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:afil00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    140159068
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:afil04121]
    140159068
   03400 DNA repair and recombination proteins [BR:afil03400]
    140159068
Ubiquitin system [BR:afil04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul2 complex
    Adoptor protein
     140159068
   Cul5 complex
     140159068
DNA repair and recombination proteins [BR:afil03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     140159068
SSDB
Motif
Pfam: ubiquitin Rad60-SLD Rad60-SLD_2
Other DBs
NCBI-GeneID: 140159068
NCBI-ProteinID: XP_072038502
LinkDB
Position
1
AA seq 122 aa
MDVFLMIRRQKTTIFTDAKESSTVYELKKIIEGITKKSPEEQQLFKDGEILENTKTLGDC
GLSANVAKAQAPASLGLSFRVNVDTDEFEPLEMTPYSNPPELPDVMKPTDSSTTNTVEQP
VS
NT seq 369 nt   +upstreamnt  +downstreamnt
atggatgtatttctaatgataagaagacaaaagaccaccatcttcacagatgcaaaagag
tccagcactgtgtacgagctcaaaaagatcatagaagggataaccaagaaatcaccagaa
gagcaacaacttttcaaagatggcgagattttagaaaacaccaagacgttaggagattgt
gggctgagtgcaaatgtagccaaagcccaggctccagcatcactaggtttatccttcaga
gtaaatgtggatactgatgaatttgagccattggaaatgacaccttactctaatcctcca
gagttgccagatgtaatgaagccaacagattctagcacaacaaatacagtagaacagcca
gtgtcatag

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