Amphiura filiformis: 140159211
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Entry
140159211 CDS
T10871
Name
(RefSeq) LOW QUALITY PROTEIN: dynein intermediate chain 2, ciliary-like
KO
K10409
dynein axonemal intermediate chain 1
Organism
afil Amphiura filiformis
Pathway
afil04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
afil00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
140159211
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
afil03037
]
140159211
04812 Cytoskeleton proteins [BR:
afil04812
]
140159211
Cilium and associated proteins [BR:
afil03037
]
Motile cilia and associated proteins
Dynein arm
140159211
Cytoskeleton proteins [BR:
afil04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
140159211
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
Beta-prop_RIG_2nd
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EIPR1
Beta-prop_HPS5
WDR55
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_RSE1_2nd
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
WDR90_beta-prop_4th
WD40_RFWD3
Beta-prop_TEP1_C
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
140159211
NCBI-ProteinID:
XP_072038706
LinkDB
All DBs
Position
8:complement(52972642..53053117)
Genome browser
AA seq
705 aa
AA seq
DB search
MPPIKGKVKGSQGGSTLKVSKARGQRTSVVGAKDDESVTEAGEAHGEEWMQAKTLIKPED
QLELSEEELKEEFTRILTANNPHAPQNIVRYNFKEGCFKQTSHVDQLAIHFSLDGNMIHK
DSDEARRQKAKYGATEGFLEKKWSAVASEQAISEAGGEGKEEGEGEGEKEEGEDGEKRDE
DTTPAPGGGEAKLTNQFNFSERASQTYNNPYRERGSQTEPPPRANFSSTANQWEIYDAYM
EDLEKQEKAKEKKAPTKKDDDKTRKKLTALETQSDDISRIGNASKIIERMVNQNTFDDVA
QDFKYWEDVSDEYRDQEGTCLPLWKFTYDKAKRLAVTSLCTNPKYKDLFAVGHGSYDFMK
QTRGMVLCYSMKNPSFPEFIYPTDSGVMCLDIHPEHPYLVAVGFYDGSVGVFNMTKQDTK
PLYQSTAKTGKHTDPVWQVAWQKDDLDNNLNFFSVSSDGRVTSWTLVKNELTYTDVIQLK
LDDVPQEGPEGTQLTPLGCGTCFDFHKQTDYLFLXGTEEGKIHKCSKAYSSQFLDTFDAH
HMAVYSVQWNYFHPKIFISCSADWSVKIWDHTYKKGPMFTFDLGSSVGDVAWAPYSATVF
AAVTADGKVHVFDLNINKYEPICEQAVVQKKKTKLCHIAFNPSHPIILVGDDRGYVTSLK
LSPNLRKYPKDKKGNPLNQGPEFEIGKMDKLLALVREPPSTTEKN
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgccacccataaaggggaaggttaagggaagtcaaggaggcagcaccttaaaagtgagc
aaagccagagggcagaggacaagtgttgttggggctaaggatgatgagtccgtcacagaa
gcaggggaagcacatggagaggagtggatgcaggcaaagacactcataaagccagaggac
cagttggaattatctgaggaggaactgaaagaggagtttacaagaattctcaccgctaac
aatcctcatgcgccacagaatatcgtacgctacaactttaaggaagggtgtttcaaacag
acatctcatgtggatcagttagccatccacttctctctcgatggcaacatgattcacaaa
gactcagatgaagccaggagacagaaagcaaaatatggtgctactgaaggttttcttgaa
aagaaatggagcgcggtggccagtgagcaagccatcagtgaagcaggtggtgagggtaaa
gaagagggggaaggtgaaggagaaaaggaagagggtgaagatggggagaaacgggatgag
gataccacaccagcaccaggaggaggcgaggcaaaacttaccaaccagtttaatttcagc
gaaagagcgtcacagacatacaacaatccctacagggaaagaggaagtcaaacagagccg
ccacctagagccaacttttcatctacagctaaccaatgggagatttatgatgcgtacatg
gaagacttggaaaaacaggagaaagccaaagaaaagaaagcgccaacaaagaaagatgac
gacaagacaaggaagaagctgactgcgctggagacgcagagtgacgacatctctcgtatc
ggaaatgcatcaaagattattgaacgcatggtcaatcagaatacctttgatgatgttgca
caagatttcaaatattgggaagatgtttcagatgagtacagagaccaagagggtacatgt
ctaccactgtggaagtttacatacgacaaagctaagagattagcagtgacatcactctgt
acaaaccccaaatataaagatctctttgctgtaggccatggatcatatgatttcatgaag
caaactcgtggcatggtgctctgttactccatgaagaacccatcgtttccggagttcatc
tatcccaccgacagcggggtcatgtgcctcgatatccacccggagcatccgtatctggta
gcagtcggtttctacgacgggtcggtgggcgtgtttaacatgacgaagcaagataccaaa
ccattgtatcagagcacggcgaagacgggcaaacatacagatccagtatggcaggtcgct
tggcagaaggatgatttagataacaacttgaatttcttctcagtatcatctgatggtcgg
gtcacatcctggactcttgtcaagaatgagttgacgtatacagatgtaatacagctgaaa
ttagatgatgtaccacaagaaggaccagagggaactcagcttaccccacttggttgcggt
acatgtttcgacttccacaagcagacagactacctgtttctcngtggcacggaagagggt
aaaatacacaagtgttccaaggcctattccagccagttcctggacacatttgatgctcat
cacatggccgtctacagtgttcagtggaactacttccatcccaaaatcttcatctcgtgc
agtgcagattggagcgttaagatttgggatcacacctacaagaaagggcctatgtttacc
tttgatctgggaagctcagtcggtgatgtggcgtgggctccttactcagctaccgtgttc
gctgcagtaacggctgatggaaaggtgcatgtgtttgacctgaatatcaataagtatgag
ccgatctgcgagcaagccgtggtgcaaaagaagaagaccaagctctgtcatatagcattc
aacccgagtcatcctattattctagttggagacgacaggggttatgttacaagtctgaaa
ctgtcacctaacttgaggaagtatccaaaggacaagaaaggaaatccactcaaccaggga
ccagaatttgaaattggaaagatggacaaactgctagcgcttgtcagggaaccacccagt
actacagagaaaaattga
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