Amphiura filiformis: 140160553
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Entry
140160553 CDS
T10871
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96-like
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
afil Amphiura filiformis
Pathway
afil03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
afil00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
140160553
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afil03019
]
140160553
03036 Chromosome and associated proteins [BR:
afil03036
]
140160553
Messenger RNA biogenesis [BR:
afil03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
140160553
Chromosome and associated proteins [BR:
afil03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
140160553
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
SIP1
Motif
Other DBs
NCBI-GeneID:
140160553
NCBI-ProteinID:
XP_072039898
LinkDB
All DBs
Position
9:5480504..5541665
Genome browser
AA seq
1948 aa
AA seq
DB search
MFGSTNKPFGSTFGAGSAFGSKTPASTGFGTPGAFGAQTPGSSLFGGTNTSSTGGLFGGG
TSTFGQTATSSTGFGFGGTNTTSAAGGGLFGGTNTGGSLFSTPAATSNAFGSGTGSMFGQ
NKTAAFGGSASGSIFGQTSTASTAFGQPATSSAGGLFGGTAAGGSLFGGQQAVVGTTVKF
QPASGSDTMVKNNVSTTVNTRHMVITAMKEYEGKSFEELRTEDYLANRKGPTSGSLLGGS
NLTTTDNKPGGMFGQQTSQASTFVFGQQNKPVFGGTSTGKIGGFGATPTSGGLFGGQTQQ
PASSLFGSKPTGFGTSTSTGGSTLFGNTGTTGFGANNNQKSLFGQPTTQSSLFGQTSTGG
FGTTTGFGTTTGFGQTQQGGGLFGNKPTGFGTPTQTGGGLGGAAGGGLFGGQKPGLTLGG
TTGTGFGKGGFGTSTGTGGLFGAKPATGFGTGLGTGLGTGLGTGLGTGTTGGGLFGTTNQ
PSTLGGFGGGFGTGLGGTSSGLGLAGTNTGLGSAGVGGAGGNQQLQQQMLVLLNSPYGDN
PLFRNNITNSDKTDETLKPISAAAQKALSTPPHYKVSARPSPKLRPRPIQSVGNKSKLFD
GFEEEDATLNSDIFVKRRSVKKLVIKKKSDKDSLEDSQHPLSATRAFSQEEELISPLPAY
PKDSLAQTHMQRLSEEQRSSSPAKTSPTSPGNGPAQKLFSTIAKPDSSPSSHNKPEDPDC
TIAALNVKNAHISRGSTELDSTSDLDRSSSQEDNQENIPPPHPAGVALRRTGYYIIPSLE
ELADATDENGDCKVEDLTIGREGYGSVFFPGETDLTGMNLDEIVHIRRKEITVYPDDDNK
PDIGDGLNKKAEVTLDRTWPLDKTNRQPIDDPDRLRAMDYAGKLERATAKLGATFLEYRA
ETGSWVFRVQHFSKYGLTDKDEEEDEAAHGGQQPPARQPLPKDQSKPEQKKEQPPRQDKP
APPPTQSLQQDRHVPSLQRRESAGGDEEPMGDDAEMGEMPRTGLGGVAYGAYMNGDAADD
EMRMIEDNRLMEESLRRHEMEKAGMDGEEEHMPSSQHLATALGMSAHRMQVMKASFFAMD
PEPEEYEQYGSSATSTMPPPRPSMFDIPARPSPIPKMEDSMSERGLPHSAWKPRPLGSPA
KFLAGMSPVTSSRASPVPKMFKEEHVERREGVTSGVFASKPKASPIGLPPALLIPSGISQ
RDHAPKVVGSRPMPHIVPLPHSVVGGKQNYLADAALVMGRSFRVGWGPNWTMVHSGKAVG
TSVKVPEIKQEPSTFSMLTSRAPTKSVLDAKPFSVSMEKVNIAPHLVGKDNKVLDLHEHA
LQVQLYHSICSTEKPCPAYAAKSGIQALHDQSQIAARDRTAGLSRDREALEHGANVWDLM
VALWGRLPEEEDDGEDLDREGYPYRKARREAFSRWLAATAHNRVQVEVSNSKFKDLGHAE
AVFSLMSGQQISEAARAAQKSGDHRLALLLAQAGCSHEVRQLVTKQLSDWFEIKADQFVA
PQYLRIYALLAGQLVWSSSIGTINTCQTLDWKRALAVHLCNLRPFCILNRHLCTPVASIS
DALQEYENGFKGHTSVGNYCKPPRPPYMENNPGLYGDLDDTADEESMMMSEEGDGVGDRE
FVVRDMCYHLLKLYSNRGHRLERVLAPTTHSGYQLDYRLSWHVLQVLQAVGYSHISEYYL
TRLHISYASQLEALGLWHWAILVLLHIPNNERREHAVREVLSRQCSLLRSEENAAKEQFL
IHRLNMPVAWIHEAKALRALYEVRHHDRAWHLLKAGHWNDSHSVIIQHLAADAVINENYE
YLKGMLSELAPDDRSITIQDWDTNGQVYLDFINMEQKVQSLVQGSTTIYELEKLHPDIAS
LCNRVGNLQCITAKDRLCQSQISKRTGNMMKIVLKLQQQGLSPGDSLPDISIPSRLLAPH
IGKLPMPEDYSLQELRQLTRSYTVELTA
NT seq
5847 nt
NT seq
+upstream
nt +downstream
nt
atgtttggatcaaccaacaaaccttttggttccacttttggagcaggatcagcatttgga
agtaaaaccccagcgtccactggttttggcacccctggtgcatttggagcccagaccccc
ggatcatcattatttggaggaactaataccagttctacagggggactatttggaggaggc
accagtacatttggtcagacagctacatcatcaacaggatttggttttggaggaacaaat
accacaagcgcagctggaggaggactctttggtggcaccaacactgggggcagtctcttc
tcaacaccagcagcaactagtaatgcatttggatcaggtactggttcaatgtttggccaa
aataaaacagcagcatttgggggcagtgcctcgggtagtatttttggtcaaaccagtact
gcaagcaccgcattcggccagccagctaccagctctgctggcggactctttggaggcact
gctgctggagggtcattattcggtggccagcaggcggtggtaggaactaccgtcaaattc
caaccagcatcaggatcagatacaatggtgaagaataatgtgtcgacgacagtcaataca
agacacatggtcatcaccgctatgaaggaatatgaaggcaaaagtttcgaggaattacga
acggaggactacctcgccaatcgtaaaggtcccacttcaggcagcctccttggcggatcc
aacctgacaacgactgacaacaaaccagggggaatgtttggtcagcagacatcacaagcg
tcaacctttgtgtttggccagcaaaacaaacctgtttttggtggaacaagcactggtaag
attggtggatttggagctacaccaacctctggtggtttatttgggggccaaacccagcag
ccagcaagtagtttgtttggaagtaaacctactggttttggtaccagcactagcactgga
ggctcaacattgtttggcaacacaggcaccacaggctttggagcaaataacaatcaaaag
agtttgtttggacagcctacaactcaatctagtttgtttggccagacttccacaggaggc
tttgggactacaacaggatttggcaccactactggatttggacaaacccagcagggaggt
ggcctctttggcaataaacctacaggttttggaacccccacccagactggaggtgggctt
ggaggggctgctggtggtggattattcggaggacagaaaccgggcctgactcttggaggt
accacaggcaccggattcggtaagggtggatttggcaccagtactggcacaggtggactc
tttggtgctaaaccagccacagggtttggcaccggtcttggcactggtcttggcactgga
ctgggtaccggattaggaacaggcaccactggaggaggcttgtttggaacaacaaaccaa
cctagtacgttaggtggattcggaggaggctttggaaccggtcttggcggtacaagtagc
ggtctgggtcttgccggaacaaacactggcctaggcagtgctggtgtaggaggagcagga
ggtaatcagcagctacagcaacagatgctggtgctgttaaactcaccctatggagacaat
cctctctttaggaataacatcacaaattctgacaagacagatgaaacattaaaacccatc
agtgctgcagcacaaaaagcactaagcacgccaccacattataaggtatcagccagaccg
tcacccaaattgcgccccagacctatccagtctgtaggcaacaagtccaaattatttgat
ggatttgaagaagaggatgccacactcaactctgatatatttgtgaagagaagaagtgtc
aagaagctggtaatcaagaagaaatcggacaaggattctcttgaagacagtcagcatcca
ttaagcgcaacccgtgcctttagccaagaggaagagttaatctcaccattaccagcttac
cccaaagactcacttgcacagactcatatgcaaagacttagtgaagaacaaagatcatca
tctcctgccaagaccagtcctacatcccctggaaatggcccagcacagaagttattctcc
accattgctaaacctgacagctctcctagcagtcacaacaagccagaagatcccgactgt
accatcgcagcactcaatgtgaaaaacgcacacatatcaagaggttcaaccgagctggac
tccacctctgacctcgatcgttcctctagccaagaggataaccaagaaaacattccacct
ccgcatccagccggagtcgccttgagacggactgggtactacataatcccgtccttggag
gagcttgccgatgcaactgatgaaaatggggattgtaaagtggaagatttgaccatcgga
agagaagggtatggaagtgtattcttcccaggagaaacagatctgacaggaatgaatcta
gatgaaatagttcacattcgtagaaaggagatcaccgtgtatccagatgatgacaacaag
ccagacattggtgatggactcaacaagaaggcagaggtcacactggacaggacgtggcca
ctggacaagacaaatagacaacccatcgatgacccagacaggttgagggcaatggactat
gctgggaagctagaaagagctacggctaaactgggagcaacattccttgaatacagggct
gagactggttcatgggtgtttagggtacagcatttcagcaagtatgggttaaccgacaag
gacgaagaagaagatgaagcggcccatggagggcagcagccgccagccagacaaccgctt
cctaaagatcagtccaaaccagagcaaaagaaagagcagcctccaagacaagacaaacca
gctccaccaccaacacagtctcttcaacaagacagacatgtcccctctctgcagagaaga
gagagtgctggaggggatgaggagcctatgggagatgatgcagagatgggtgagatgcca
aggactggtcttggtggtgtggcgtatggagcgtatatgaatggagatgcagctgatgat
gagatgagaatgattgaagacaaccgcttgatggaggagagtcttagacgtcatgagatg
gagaaagctggtatggatggtgaagaagagcatatgccatcatcacaacaccttgctact
gctcttggaatgagtgcacacagaatgcaagtgatgaaagcctcattttttgcaatggat
ccagagccagaagaatatgagcaatacggcagttctgccacatcaacgatgccaccgcca
aggccttccatgtttgatatcccagctagaccatcaccaataccaaaaatggaagactcc
atgtctgagagaggtttacctcatagtgcatggaaacctcgccctctaggtagcccggcc
aaattcctagcaggcatgtcgcctgtgactagctcacgtgccagcccagtaccaaaaatg
tttaaagaagagcatgtggagagaagagaaggagtgacttccggagtatttgcatccaaa
cccaaggcctccccaatcggtcttcctccagccctgctgattcccagtggtatcagccaa
cgtgatcatgcaccaaaggtcgtagggtcacgacctatgcctcacattgtgcccttacca
cattctgttgttggcggtaagcagaattacttggccgatgcagcgttggttatgggacgg
tcattccgtgttggatggggaccaaactggacaatggtgcattctggcaaagctgtgggg
acatctgtaaaagtaccagagatcaagcaagaacctagtacatttagtatgttgacatca
agagctcctaccaagtctgttctggatgctaaaccattcagtgtctccatggagaaagtt
aacatagctcctcatctcgttggaaaagacaacaaagtcctggatcttcatgagcatgcc
ttacaagtgcaactctatcacagcatatgctccacagagaaaccatgcccagcttacgca
gctaaaagtggcatccaagcattgcatgatcaatcccagattgcagctagagatcgtacg
gctggcctgagcagggaccgtgaagccttggaacacggtgccaatgtgtgggatctgatg
gtggcattgtggggcagattacccgaggaggaagatgatggagaagatctagaccgtgaa
ggttacccataccgcaaagccagacgtgaagcattctctcgctggttggctgctactgcg
cacaacagggtacaggtggaagtcagtaactcaaaattcaaggatctggggcatgcagaa
gcagtcttctccctaatgagtggtcaacaaatcagtgaagctgcaagagctgctcaaaag
tcaggtgatcacagattagctctcttattggctcaagctgggtgtagtcatgaggtacga
caattggttaccaagcaacttagcgattggtttgagatcaaggctgatcagtttgtggca
ccacagtatttgagaatttatgcattacttgcaggccagttggtctggtcatcctcaata
ggaacgataaatacatgtcaaacattagattggaagagggcattagctgttcatttatgt
aacttacggcctttttgtatactcaacaggcatttatgcaccccagtagcttccatctca
gatgccctccaggaatatgaaaatgggttcaaaggtcatacaagtgttggtaattactgt
aaaccaccacgtccaccttacatggagaataatcccggtctctatggagacttagacgac
accgctgatgaggagtctatgatgatgtcagaagaaggggatggagttggagatcgtgaa
tttgttgtgagggacatgtgctatcatctgcttaagttgtacagcaataggggtcatagg
ttagagagagtgttggcacctactacacattctggctatcagctagattatagactaagt
tggcatgttttgcaagttttacaagctgttggctattctcacatatcggagtattacttg
acacgtctacatatcagctatgcgtcacaactagaggcattaggactatggcactgggct
atattggtactgctgcatatacccaataacgaaaggcgtgagcatgctgtacgtgaagtg
ttgagtcgtcagtgtagtcttttacgcagtgaggagaacgcagccaaggaacagttcttg
attcatagactcaatatgcccgttgcatggatacatgaagccaaggctttacgggctctg
tatgaggtccggcatcatgaccgtgcttggcatctgttgaaggctggtcactggaatgat
agtcattctgttatcatacaacatcttgctgctgatgcagtcattaatgaaaactatgaa
tatctcaaagggatgttgtcagagcttgccccagatgatcgtagcattacaatacaagac
tgggacaccaatggtcaggtgtatttagatttcattaacatggaacagaaagtgcagtcg
ttggtgcaaggcagtaccaccatatacgagctggagaaactacacccagacatagcgtca
ctgtgtaaccgtgtgggaaatcttcagtgcatcactgcaaaggaccggttatgtcagtca
cagatttccaaaagaactggcaatatgatgaagattgtgctcaaacttcagcagcagggt
cttagtcctggtgactccttacccgatatcagcattccgtcacgtctcctggctccacac
attggtaaactccccatgccagaagactacagtctacaagaactacgccaattaacaagg
agttacacagtggaacttactgcttag
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