Amphiura filiformis: 140160712
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Entry
140160712 CDS
T10871
Name
(RefSeq) sodium- and chloride-dependent glycine transporter 2-like isoform X1
KO
K05038
solute carrier family 6 (neurotransmitter transporter, glycine) member 5/9
Organism
afil Amphiura filiformis
Pathway
afil04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
afil00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
140160712
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
afil02000
]
140160712
Transporters [BR:
afil02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
140160712
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Gene cluster
GFIT
Motif
Pfam:
SNF
ABHD16_N
Motif
Other DBs
NCBI-GeneID:
140160712
NCBI-ProteinID:
XP_072040104
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Position
9:18100400..18132370
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AA seq
632 aa
AA seq
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MASSKDAKELEAEAKLPLYDTPNGSNGHAYSPVVEVMEEDEDSGRGTWSGKLDFILSCIS
FAVGLGNIWRFPFLCYENGGGAFLLPYIFMMSVAGMAVYFLETAMGQFASLGAITVWKMS
PFFKGIGYGMVIVGLYVAVFYNVVVSYTIFYIFASFRKEVPWATCGNYWNTENCTVDAHN
MNLTNSSDFKPIRPSEEYFNNRVLKISDGMDNMGSLNWELALCLLFAWVIVCLSLAKGIK
SSGKVAYATAIFPYVVLIILFIRGITLPGASDGIIYYIKPDIKKLGNAKVWQDAAVQVFF
SLGSSFGTLHTLSSFNKWNQNCHRDAIIVCWLDCATSVFGGFVVFSVLGFMAKDAGTTVD
QIVASGPGLAFIAYPEAIARMPLSPLWSVLFFAMLFMLGLGSEMAAYEAILTSTLDDIGE
TGKWLRQHKMLVTIAGSIVMYLAGLSMVTQGGIYLLNLINVYGVGMNILILAFLECVAVA
FVYGIDRFMNDLEVMLGFRPSIFWKISWMFISPIFLLFVLVFSFVLYEPLKYGEDYIYPD
WAIAIGWLLLVTSLFPAVGYPFYSMWQQEGGLFERLKQSMQPTKDWGPALNQNRKQAGYR
VLPMREKIDSSGTRNRLQNGKNYSPIDDTTVV
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atggcttcatccaaagacgccaaggaattggaggcagaagctaaactgcctttgtacgat
acaccaaatggttcaaatgggcacgcatacagccccgtggtagaggtaatggaagaagat
gaagactcaggcagaggcacgtggtcaggcaaactagatttcattctgtcgtgtatcagc
tttgctgtgggtttaggaaatatatggaggtttccgttcctttgttatgagaacggcgga
ggtgcatttcttctgccctacatttttatgatgtctgttgctggaatggccgtatatttt
cttgaaacagctatgggtcaattcgctagtctgggagccatcacggtttggaaaatgagt
ccatttttcaaaggtattggttacggaatggtcatcgtcggcctctacgtagctgtattc
tacaatgttgttgttagttatacaatattttatattttcgcatcatttcgaaaagaagta
ccatgggctacctgcggtaattattggaacacagaaaactgcactgtagacgcacacaac
atgaatttgacgaatagcagtgacttcaaaccaatacgacccagtgaagaatatttcaac
aatcgcgtacttaagatatcagatggcatggacaatatgggatcgttaaattgggagctg
gcactgtgtctgctattcgcttgggtcattgtgtgtctatctcttgccaaaggaatcaaa
tcgtcaggaaaggttgcctatgcgacagctatctttccgtacgtagtattaattatcctt
ttcatccgtggaattacgctgccaggtgcttcagatggaattatctattatatcaaaccc
gatattaagaaattgggcaatgcaaaggtatggcaagatgctgctgttcaggtgttcttc
tcactaggatcatcatttggtactctacacacattgtcaagttttaacaaatggaatcaa
aactgtcatagagatgcaatcatcgtatgctggttagattgcgcaacgagtgtttttggc
ggctttgtggtattttctgttcttggttttatggctaaagatgcagggactacggtcgac
caaattgtagcttcaggtccgggactggctttcattgcgtatcctgaagcaattgctcga
atgccattatccccactctggtcggtgcttttctttgctatgttatttatgcttggactt
ggaagtgagatggcagcgtacgaagcgatacttaccagtacactggatgacattggtgaa
accggcaagtggttacgacaacataaaatgttggtcactattgctggatctattgtaatg
tacctagctggtctatcaatggtgacacagggaggtatttatcttttgaatttaattaat
gtgtatggagtaggaatgaatatactaattctggcatttttagaatgcgtagctgtagcc
tttgtatatggtattgataggtttatgaatgatttagaagttatgctaggatttcgtcca
agtatcttctggaaaatctcttggatgttcatctcgcccatattcctgctgtttgttttg
gtgttctctttcgtgttatatgaaccccttaagtatggtgaagattacatatatccagat
tgggccattgccattggttggctgctactcgtcacttcgttgttccccgctgttggatat
ccattctattcaatgtggcaacaggaaggcggcctgtttgagcgtttaaaacagtctatg
caaccaactaaagattggggccctgcactaaatcaaaataggaaacaagcaggatataga
gtactacccatgcgtgagaaaatagactcgtcaggaaccaggaatcgactgcagaatggt
aaaaactactctccaattgatgacactactgttgtttga
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