Amphiura filiformis: 140160908
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Entry
140160908 CDS
T10871
Name
(RefSeq) protocadherin-1-like
KO
K16498
protocadherin delta 1
Organism
afil Amphiura filiformis
Pathway
afil03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
afil00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
140160908
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
afil01009
]
140160908
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
afil04515
]
140160908
Protein phosphatases and associated proteins [BR:
afil01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
140160908
Cell adhesion molecules [BR:
afil04515
]
Cadherins
Protocadherins
140160908
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
140160908
NCBI-ProteinID:
XP_072040343
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Position
9:complement(34159059..34273112)
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AA seq
1126 aa
AA seq
DB search
MYDLLLLAIDGGVTPLTGSARLNVTVLDSDDHRPQFVRKEYTVSIAENLDVGTEILKVEA
HDPDLGTNGQIIYDFSRSVALFDIESDTGAIRTKGRVDYETDTSFQLIVKCSNNVPNPVS
DFASVTINIIDVNDNRPTLEVNAIEGSGNYIHIPETSPPSTPLAFVKVSDPDSGSSGEVR
LLLSGHYDHFELQMVSATRYFLATKTELDREDVAVYNITIIAEDKGDPIQWRQRKFAIFL
DDVNDNAPFFSKPIYYTQIVENNAPDTRIETIIATDLDEGENATVVYSLPGNQHGFAIDS
ESGELIATSVLDREVASTIAVTVSACDQGRPQPMCNNVSVMLTVLDENDNPPEFVLGTYE
FGVYENQLEGTLVGQVQAIDKDMGDNSRVTYAIKTEGAREYFRIDGSSGEIFTKISSLDR
EVQASYAMVVTATDGGGVRAERTTGVTVLITVLDRNDNAPRIVYPNPQDDAVFIPLHAQP
GFVVCQMEAEDYDDGVNARLSYGILDGNIYDIFGMRKGGQLVTSRSLRPQWAGVHFLNLR
VKDSGASSIETTAQLTVVIADMSFNESIREDMFFQLYNMTVNTFLKMEADTGQAQGAASK
WPVIAVIALGSVAFILLMIFLIVATKCRDKNKNRENQYAAPPANTTDDMNTGSKPPSERK
TSGTNSTNISLATSQSSIPSKNIQKWKNAEKNGSIDSRLGNKQMTTFGSNSDVHSDSMQS
LHSNSNRRTPDPDAEVQKLLNKLRHQEGGDAADDFSHSSCDSGHGDSDRDTRESNGTNSM
SPDINELQNGRAQSYPRLAPLAQISGRSLMNAGGERGSYAASSLCTPECRTLGHSDLCWS
QNTINGRPKADSFSGASSSQSRTLPSAGRSAARHQDHAGDPRLRSSGVGRESPSRQSSNS
RESPNQLSVPSARMGAHTAVASPNHNQNSGQRSGQSTDRNASSPSKTDAGAGRGGGANTP
GAGPLTPISEHPEDNPFDHRGRTHRGDKSSRGRGGKPRAQTDHGRINNNYQPDDRQQRTP
TNVTFKDDRTSTNPNGSYSTNRSSHRHAPSPLSNNIRNNVQHGMIVEASGYGSHSSVSSE
SSSEVNSHGGYSLDDLDGVLERCDIPGMDATITMDKSDQVPFTDWV
NT seq
3381 nt
NT seq
+upstream
nt +downstream
nt
atgtacgacttgcttcttctcgctattgacggcggtgtcacgcctctcacaggatctgcc
agattaaatgtgaccgttcttgattctgatgatcaccgtccacagttcgtacgaaaagaa
tacactgttagcatagcagagaatttggatgtcggaacggagatcttaaaagtggaagca
cacgatcctgatttggggaccaacggacaaattatttacgactttagtagatctgtggcg
ttatttgatattgaatcggatactggtgctatacgcactaaaggcagggtggactatgaa
actgatacgtctttccaacttattgttaaatgctccaacaacgtccctaacccagtatct
gattttgcttcagtgactattaacattattgacgtcaatgataaccgaccaacgctagag
gtgaatgccattgaaggcagtggtaactatatccatataccagagacatcgcctccttct
actcccctagcttttgtaaaggtctctgatcctgacagtggaagcagcggtgaagttcgc
cttctactctctggacattatgatcattttgaactgcagatggtcagtgccacacggtac
ttcttagcaaccaaaacggaactagatcgtgaagatgtagcagtttataacattactatc
atagcggaagataaaggtgatcctatacaatggaggcaacgtaaatttgctatttttctt
gacgacgtcaatgacaatgcccctttcttttcgaaaccaatttactacacacaaatcgta
gaaaataacgcaccagacacccgtattgaaaccatcatagcaacggatttagatgaaggt
gagaatgccactgtggtgtactctttaccaggtaatcaacatggttttgccatagattca
gagtctggtgagcttatagctacatctgtgttggatcgtgaagttgcttctacaatagct
gtcacagtgtcggcttgtgatcaaggaagacctcaacctatgtgtaacaatgtctcagtt
atgttgactgtcctggatgagaatgacaatcctcctgagtttgtgcttggaacctatgag
tttggagtgtatgaaaaccaattggaaggtactttagttggtcaagtgcaagctatagat
aaagatatgggtgataattctcgagtgacctatgccattaagaccgaaggcgctagagag
tattttcgtatcgatggctcttccggggagatatttactaaaatttcttctttagatcgt
gaggtacaggcatcttatgcaatggttgtgactgctacagatggcggcggtgtgagagca
gaacgaaccactggtgttaccgtattgataacagtgttggacaggaatgacaatgctcca
aggattgtataccctaacccacaagacgatgcggtgttcataccattacacgctcaacct
gggtttgttgtgtgtcaaatggaagcagaagactacgacgatggcgtcaatgctcgatta
tcttacggaattcttgatggtaatatctatgatatctttggaatgagaaaaggtggacaa
cttgtaacgtcaagatcgttgaggccacaatgggctggagtccactttctaaatttgcgc
gtgaaagattctggagcttcttccattgaaaccactgctcaattaactgtagtcatagca
gatatgagcttcaacgaatcaattcgagaagatatgttctttcagttatataacatgact
gtaaatactttcttaaaaatggaagcggatacgggacaggctcaaggagctgccagtaag
tggccagttatagctgttatagctctaggttctgtagcatttattcttctaatgatattc
ttaattgttgcaacaaaatgcagagacaaaaacaaaaatcgcgagaaccaatatgcggcg
ccaccagctaatacaacggacgatatgaacacaggtagtaaaccaccatcagagagaaaa
acctctggtacaaactctaccaatatatccctagcaacatcacaatcctctatcccatcc
aaaaacatacaaaaatggaaaaatgctgaaaagaatggctccattgattccagattaggt
aacaagcagatgactacctttggcagtaattcagatgtgcattcagacagcatgcagtct
ttgcattccaactccaatagaagaacacctgatccagatgcagaggtgcagaagttactc
aacaaactgcgacaccaggaaggtggtgacgccgctgatgacttttctcatagtagttgc
gacagtggacatggcgacagcgaccgggacacgcgagagtctaatggcacaaacagtatg
tcacctgatatcaacgagttgcagaatggaagagcacagtcctaccccagattagcacca
ttggcacaaataagtgggagaagtttgatgaacgcaggaggagaacgtgggagctacgcg
gcaagtagtctatgcaccccagaatgtcgtactctaggacattcagacctctgttggagt
caaaataccatcaatggaagaccaaaggcagatagtttctcaggtgcatcatcgagtcaa
tctcgtacccttccatcagcgggacgatcagcagctcgacatcaagatcacgctggtgat
cctagactgcgatcgtctggtgttggtagagagtctccgtcccgtcaatcttctaattca
cgagaatctcccaaccaacttagtgttcctagtgcaagaatgggagcacatacagcagta
gcctctcctaatcacaatcaaaacagcggtcaaagaagcgggcaaagcaccgatcgtaat
gcatctagtccgtccaaaactgacgctggagcagggcgaggaggaggtgcaaacacacct
ggtgcaggacctttgacccctattagtgaacaccccgaagataacccatttgatcatcga
ggtaggactcatagaggggataaatcttcgcggggtcgcggtgggaaacctcgagctcaa
actgatcatgggcgtatcaataataactatcaaccagatgataggcaacaaagaactcca
actaatgttacatttaaagatgacagaacatcaactaatcctaatggatcctattcaacg
aatagatccagtcatagacatgctccttcaccattatcaaacaatatcagaaataatgta
cagcatggtatgatagtggaagccagtggctatggttctcattctagcgtatcaagtgaa
tcgagcagtgaagtgaactctcacggtgggtattcattagacgatttagatggtgtttta
gaaagatgtgatattccaggtatggatgcaacaattactatggacaaatctgaccaggtg
ccttttacagactgggtgtag
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integrated database retrieval system