Amphiura filiformis: 140160964
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Entry
140160964 CDS
T10871
Name
(RefSeq) glycine receptor subunit alpha-4-like isoform X1
KO
K05181
gamma-aminobutyric acid receptor subunit beta
Organism
afil Amphiura filiformis
Pathway
afil04080
Neuroactive ligand-receptor interaction
afil04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
afil00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
140160964
04082 Neuroactive ligand signaling
140160964
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
afil04040
]
140160964
Ion channels [BR:
afil04040
]
Ligand-gated channels
GABA-A
140160964
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
140160964
NCBI-ProteinID:
XP_072040414
LinkDB
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Position
9:38231053..38474524
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AA seq
629 aa
AA seq
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MKKYILSTLVASFLYLSYLPMQSANDSKSCCEGQRETKSTSPNCTKDDGKEVPRRSLGTP
LERNTSRVLTMLLNGYDKRLRPNYGGDPVKVNVSMMVYSIGPINEQKMEYTVDMYFRTEW
HDPRLTYNDIDTSLNLNADMVDRVWIPDAYFVNEKDARFHNVISKNSLIRLTPLGHLLFS
TRITVIASCTMDLAYFPMDKQRCHLILESYAYSDKDIQFKWLLETDTTSPIWVEPKISLP
QFKLLGFNELENTIEYYVGNYSQLYCTFYLGREISYYLIQTYMPATLIVVVSWLSFWIHR
TATPARVALGITTVLTMTTLMGNAGSSLPKLSYVKSIDIYLGMCYFYVFAALLEFSMVCY
FDKPRFKEARARNAMIRRSTTVVERTNVFRGNDGDEIEISFGNNTTTGTVGNKVNGSRYA
PVKTSSPYHRPNRSHVRDQEDIQHGQIDQSGQYGSIREGYGVREVQGVREGYGVRECHGV
REGHHSVREGHQSVREGHHSFREGHHSVRESHGNREGHGVREGQGVREGHGAREGHGARE
GHGAREGHGVREGHVKSEDCFPEDIDCFKCECYVNLKQTGCDPGKIDQNSRILFPFTFLL
LNIIYWTYYIVITDITTEDLIKQDIAALA
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaatatatactatcaacactagtggcttcttttctgtatctttcttatttacca
atgcaaagtgccaatgattccaaaagctgttgtgaaggacaacgtgaaactaagagtaca
agtccaaattgtactaaggacgacggaaaagaagtaccaagaaggtctcttggaacacca
ctagaaaggaatacatctcgggtcctaacaatgctgctgaatggttatgacaagagacta
cggcctaattatggtggagacccagttaaagtcaacgttagtatgatggtgtactccatt
ggaccaattaatgaacaaaaaatggaatacacagttgacatgtattttcggacagaatgg
catgatcccagactaacgtacaacgatattgatacgtcattaaatcttaatgctgacatg
gtggatagagtctggataccggatgcatattttgtcaatgaaaaagatgccagatttcac
aatgtaatatcaaagaattcactcataagactaacgccacttggacacctcttattcagt
acaaggataacagtgattgctagttgtactatggatctggcctactttccgatggacaag
caacgatgtcacctcatcttggaaagttatgcgtatagtgataaagacattcaatttaaa
tggctcctggaaactgatacgacgtcaccaatttgggttgagcctaagatttcattaccc
cagtttaaactcttgggattcaacgaattagaaaacacaattgagtattacgtcggtaac
tattcacaactctactgtacattttacctcggacgggaaatatcatactatctaatccaa
acatatatgccagctacattaattgtcgtcgtatcctggttgtctttctggattcatcgt
acggctacacctgcaagagtcgctttaggcataaccaccgtgcttacaatgactacttta
atgggcaatgctgggtcttcactaccgaaactttcatacgtcaagtcaattgatatatac
ttaggaatgtgttatttttacgtctttgccgctttgttggaattttctatggtgtgttac
tttgacaagccccgatttaaggaggcgagggctaggaatgccatgataaggagatcaaca
acggtggttgagaggacaaatgtgttcagaggaaacgacggggatgaaattgaaatttcg
tttggaaacaatacaacaacgggaacagttgggaataaagttaatggatctcgctatgct
ccagtgaaaacatctagtccataccaccgtccaaacaggtctcatgtacgggaccaagaa
gacattcaacatggtcaaattgaccaatcaggacaatatggtagtatccgtgaagggtat
ggcgtccgggaagtgcaaggcgtccgggaaggttatggcgtcagggaatgtcatggtgtc
cgggaaggtcatcatagcgtccgagaaggtcatcaaagcgtccgggaaggtcatcatagc
ttccgggaaggtcaccatagcgtccgggaaagtcatggcaaccgagaaggtcatggagta
cgggaaggtcaaggcgtacgggaaggtcatggcgcacgggaaggtcatggcgcacgggaa
ggtcatggcgcacgggaaggtcatggtgtccgagagggtcatgtcaaaagtgaagattgt
ttcccggaagatattgactgtttcaaatgtgaatgctatgtaaatctaaagcaaactgga
tgtgatcctggaaaaattgaccaaaactcaagaattctattcccgttcacgttcttattg
cttaacatcatctactggacatactacattgtaatcactgatataactacagaggacctt
ataaagcaggatatagcggccctagcttga
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