Amphiura filiformis: 140161049
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Entry
140161049 CDS
T10871
Name
(RefSeq) LOW QUALITY PROTEIN: extracellular matrix protein 3-like
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
afil Amphiura filiformis
Pathway
afil04512
ECM-receptor interaction
Brite
Lectins [BR:
afil04091
]
C-Type lectins
Lecticans
140161049
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
140161049
NCBI-ProteinID:
XP_072040531
LinkDB
All DBs
Position
9:45121475..45304157
Genome browser
AA seq
3183 aa
AA seq
DB search
MESRTLIVCLLAGVCGLVSSQGGGNVPIDFQGDPRGDGGQGAGHGGQGQGGQFPDFFNFQ
DFDFNLATADIQVDIGLPPDTRGDSTTGGAVAAGGGQRGTTFVHNNQGGAGGLFLTGPYE
PAEVASQVIRRNPGINVPFGREKVIDPISELNLYVREGDRCVVTVLHNDPLSQVPGRVYP
ISFPCDFAPGEVKYVHFGSRSPQRDRVLMQVRYDTETDTYIIPFMMNVNVQSTQLEIVTR
NQPLIVENLMGRSDVIDQRKLEFYYDPNRNLCKVTVLNANSGLPRYGRVLNANEYGQMVD
CEDFLASNIQYEHRALTDSPRADYIPMVVELTDLEGNLIKQEYFQVMVRINAGAENTPPM
PSLTAMMILEVDQFVMTAITPEILAAEDTETNPDALIFNITTPLGPGEGYIVSTDDRSLP
LSSFSQRDVRELKIAYVPPAEDSDVQRYFQIELEVVDAELATSEPFALMVTVKPKNTMAP
VATRNTGISLFEGQSRPLLNFQNLEISDEDNLRDVIIAPINGLRHGQLRVRGFPQKFFTI
DDLLAGVVTYHHDGSDTYSDNIIFRMTGGSNEVEFLFIVTIAPLDDEPPIVDVNTGLLIN
KGDLTLISQFVLSATDIDSDDSTIMFMLEPPFSNQGDFVIRQLDPPVDPQNWRQIGGFYE
QTVTEWLLDDILNNRLYYRHNGVHSTDVVMDRMLFRVADKSDPPNVSAAEEFVVKIMPVD
DQPPYLYPGTTLEMSVDEFQLTEVLKKQLRYTDLDSDDRELVYTITMPPFDIDPQSPLPA
GQIVLTEDPSTPITQFKQSQINHLKIGYQPPSIELGITSRVIQFVYAVSDPAGNIVSGQR
FSIYLRPVDNKPPQVTNPGFSVYERNKVTIDPTILDATDEDTENSDISFVVIQSPAQGTL
DLDGIPMQPGDRFNLDDIATNRIEYVNSGAEMDNDVIELELTDGIHIVPVTIXVDVRPID
DEAPTLDLPPGTLGSFLEVPEDSSSLITSNILSASDPDTEDLRLTFILDRPPSEGVIENN
GFPVQRFTQQDIVNGYIRYRHIGGEIGLVKRDDSFNLTLSDMSDEWIRGGNRITQVEVFV
TILPVDNRAPEVTIGDQYYVDEGEKSTINLNHLSATDLDTNDDDIMCTVIVQPTQGYLEN
ISPAPGSEKSRAGIPITAFSVKDLRLNHLNYVQSIREGVEPEDDQFTVYCSDGINRSPNH
FFPINIIPTNDEPPQMFYREWTVDEGAELNIDTPILNAIDNDIPQDELHFYIITPPKYGT
IIQRRPDGDVPVLNFTLTQIQNGNDIVYKHDDSETTEDSVKILLTDGTHEVTEEIPIYIL
QRDDETPRVTINDGLDLEIGEMEIITNRILKATDLDSPDSNLTFTIRFGPRYGLLQRLDK
FSGNPIENITVGMNFTQWEIDNQRIKYTHTSNEGGRDLIKFDVTDGENPLIDRYFYVTVD
HIDNVYPDVINAGVTLQEHGRVTLTTDTISTSDLNSPDEDLLFTITESPNKGHLELTDNP
GVPITSFTQLQLAGNKIVYVHTSTDEMKMDSFQFQVTDGFNTVVRTFRISLSEVDNKLPA
VTYTSLALKEGANKLITPFELRIDDRDTDDSLLKFTITQLPLHGNILLNKTQLVTMFTMS
DLYNNLISYQHDGTETGDDSFSFIISDGTHNDFIVMPNTDNPTRKPQKMRIEIVPVDNGV
PQIVVNRWAPTLNLLPSGNQGFVITNKFLRAEDRDSEDSDLVYVITTPPRFGYLMNILNG
NISISNFTQDDVNNMYIQYVLYPGQNATGDTFFFSIRDPGGNEXPNQPYQLNWSWISLDR
EYYEVNETTRHLSILLNRRGYLGETSFVGIRAVDGTAKAGEDFNGKKAQQVQFNPGQTEG
LWRVRILDDTLFEQAETFEVILHDAVMGSLEYPEHAIVRILDGEDESTVFIDVPERYVIE
EDVGELLIPIRRTGDLSEELMMICSTMPDTAIGSNPSPVLSYMDYISRMEEDPENFVRFD
KGEDVAYCRVTIIDDSLYETEEQFQVKLTMPMGGRIGLPASVNVVIAPDADDEPSFYFTE
PEYHVDESDGYLEVQVWRTGTDLSQMASVTVRSRKSTPVSAVSGEDYAGISRNLDFAPGV
TMQTVRVYILDDLGQPLLEGPETFELVLTMAMNAVLGAPAITVVTINDTISDLPKVQFRN
PSYDVCENDLTVSAMVVRSGDLSIQSTVRCYTRQGSAQVMMDYDERPNTEASIITFLPGE
RQKECSVLLMNDNEYEPNNEQFRLVLNHPRTESGFAAMVGELNETTINVCDDGDKPIIKF
PQTKFSIDEPTDIDSVSVMRIPIIRMGDSSQTSVVRVHTKDGSAKSGLDYNPLSREITFG
WNVTEQIVEIEILPDDERNEMREAFTVHITMDENMIAEVQMNRALVYIEQEGQVTGVTFP
STPIVVSLIDYDNIDNAQQYPPRGYPLVCVTPCNPKHPEYSTTGQICDSENVNDTLTQFR
WMVAAPTTENGVTYPLKEINSNTFFTSTHMITLDSIYYGPGSRVSCVARAVSNYGDPGRE
HYSLPITISKEEGMCLPRVADAIGAEPYNARLRYTGPTDPDYPNKIKLTVTMPHVDGMLP
VISTRQLANFELALSPDGLRVGTHRCSNLLDFNELPTQYGFISEETKNPNVIGEVVPYQF
NQDLRGPSTLRFYRNLDLEACLWEFNAYYDMSELLDECGGVVGTDGQVLDLVQSYVNLRV
PLYVSYVFHSPAGIGGWQHFDQRSDLQLTFVYDTSILWQNGIGAQTTDSTLSGSLYPTSM
RIDENGRLVVNFRTDAQFRGLFVPSHPASNMQSSVTSSDQPGLTYSLTLLRSEPTFAQPE
QLWQFVSDHAVSDYSGNYVIRLIPCTTMPNQEYSAQITCNPQEKITFDLPIRFQQVSDPV
PAEYSLNTEFLLLGKEMLWLSDGSMGFGDGADAAFAPGDEIYGRIHVDPVQNLGDGFNLN
IEKVFLCSGRDGYIPKYNPANSEFGCVADTPNLLYAFKILDRGAPDTTTRSFSGVPFNAT
LAIDNPTALPLVQQAGADGFSMGSNALFSVSSGRQWYLHSIYTVESANGNGIGKRSIERH
SLMGAPNSINRRRRQAQEYQQLVSDIGSAAGLGTNIHRVALSNNKNDITNPNLGGKYNKG
GSSAPVVPVVAIITVLALVLLIIIIAVIVIRRRRTTSVKVVAVNGGAQVIAANHMDEGDN
TEV
NT seq
9552 nt
NT seq
+upstream
nt +downstream
nt
atggaatcaagaactctaatagtttgcctgttagcaggcgtatgtgggcttgtatcgagt
caaggaggaggaaatgttcccattgattttcaaggagatccgcgcggagatggtggacaa
ggcgctggacatggtggacaaggccaagggggacaattccccgattttttcaattttcaa
gattttgacttcaatttagctacagcagatattcaagttgatattggactaccccctgac
accagaggtgattcgacaactggaggtgctgtggctgctggtggcggtcaacgtggtacc
acatttgtgcacaacaaccaaggtggtgctggaggactcttcctaactggaccctatgaa
ccagctgaggtggctagccaagttatcagaagaaatccaggaatcaatgtaccatttgga
agggaaaaagttatcgatcctatctcagagcttaatttgtatgtcagggaaggcgatcga
tgtgtagttaccgttcttcataatgatcctctttctcaggtaccaggtcgtgtctatcct
atctcctttccatgtgattttgctccaggtgaggttaagtatgtccacttcggatccaga
tctccacagagagatcgtgtactcatgcaagtcagatacgataccgagacggacacgtat
atcatacccttcatgatgaatgtcaatgttcaatccactcagctcgagatcgttaccaga
aaccaaccacttatcgttgaaaatttgatgggcagaagtgatgttattgatcaaagaaaa
ttggagttctattatgatcctaaccgtaatttatgtaaagttactgttttgaatgccaac
agcggcttgccacgttatggacgtgtattgaacgccaacgagtatggacagatggtcgac
tgcgaagatttcttggcttccaacatccagtacgagcatagagccctgaccgactctcca
agagcagattatattccaatggtcgttgaacttacagatcttgaaggtaatctcatcaag
caagaatacttccaagtaatggttcgcatcaatgctggagcagaaaataccccacctatg
ccatcattgactgccatgatgatactcgaagtcgaccagtttgttatgaccgctattact
ccagaaatcctggctgcagaagataccgagaccaatcctgatgctctgatcttcaacatt
acaactccactgggaccaggagagggttacattgtaagcaccgatgatcgtagcctgccc
ctctcatctttctcgcaacgtgatgtccgtgaactcaagatcgcatatgttcctccagct
gaagattccgatgttcaacgctacttccaaattgagcttgaagttgttgatgccgagcta
gctacatcagaaccatttgctttgatggtcactgtcaagcctaaaaatacaatggctcca
gtggcaacaagaaacaccggtatttcattgtttgaaggacagtcccgcccacttcttaac
ttccaaaacttggagatttcagatgaagacaacttgagagatgtgattattgctccaatc
aatggactgcgtcatggacaattgagagtccgcggattcccacagaaattcttcactatt
gatgatcttttagcaggtgtcgtgacctaccatcatgatggctcagatacatacagtgat
aacatcatcttcaggatgaccggcggcagtaatgaagttgaattcttgttcattgtgaca
atcgctcctctcgatgatgaaccaccaattgttgatgtcaacaccggtcttctgatcaac
aaaggtgacctcactctcatcagccaatttgtcctaagtgccacagacattgattcagat
gattctaccatcatgtttatgctggagcctccgttctcaaaccaaggcgactttgtgatc
cgacaacttgatccacctgtagatccacaaaactggcgtcaaattggtggcttctatgag
caaaccgtcactgaatggcttctggatgacatcttgaacaaccgcttgtactaccgccat
aatggagttcacagcactgatgtcgtaatggataggatgctcttccgagttgctgacaag
tctgacccaccaaacgtctctgctgctgaagaatttgtcgttaagatcatgccagtagat
gaccaaccaccttacctgtacccaggcacaactcttgaaatgtctgttgatgaattccaa
ctcaccgaagtcttgaagaagcaacttcgctacaccgatctggatagtgatgatcgtgaa
ctcgtatacacaatcaccatgccaccttttgacatcgatcctcaatcaccactaccagct
ggtcaaatcgtattgactgaagatccaagcactccaatcacccagttcaaacagtctcag
atcaaccatctgaagatcggctatcagccacccagcattgagcttggcatcacatccaga
gtcatccaatttgtgtatgctgttagtgatccagcaggtaacatcgtatcaggccagagg
ttcagtatctacttgagaccagtcgacaacaaaccaccacaagtaaccaatcccggtttc
tctgtatatgaacgcaacaaggtgaccatagatccaaccatccttgatgcaaccgacgaa
gacaccgaaaattccgatatctcatttgtagttatacaatcacccgcccaaggtacgctc
gatcttgatggaattccaatgcaaccaggcgataggttcaatcttgacgatatcgcaact
aaccgcatcgagtatgttaacagtggtgctgagatggacaatgacgttattgaactagaa
ttgaccgatggcattcatattgtacctgtcaccatcntcgtcgatgtcagaccaattgat
gatgaagcaccaactcttgatctgcctcctggtactcttggatctttcttggaagtccct
gaagattcttccagtcttatcacctccaacatcctgagtgcttccgatccagacactgaa
gatctccgacttacttttatcttggatagaccaccaagtgagggcgttattgagaataat
ggattccctgtgcagcgattcacccaacaagacattgttaatgggtacatccgataccgt
cacatcggaggtgaaattggtttggtgaagagagatgactcgtttaatctgactttgtca
gatatgtctgatgaatggatccgtggtggtaaccgcatcactcaagtcgaagtgtttgta
accatccttccagttgataacagagcaccagaggtcaccattggagaccaatattatgtt
gatgaaggagagaagagtaccatcaacctgaaccacctatcagcaaccgacttggacacc
aatgatgatgacatcatgtgtacagtcattgttcaaccaacgcaaggttacttggaaaac
atttcacctgctccaggctcggaaaaatctcgtgctggaatcccaatcactgctttctcc
gtcaaagatcttcgtctgaaccacctcaactatgtgcagagtatcagagagggtgtagag
ccagaagacgaccagtttaccgtgtactgctctgatggtatcaaccgatcaccaaaccat
ttcttcccaatcaacatcatcccaaccaatgatgaaccaccacagatgttctacagagaa
tggactgttgatgagggagcagaattgaacattgacactccaatcctgaatgctattgac
aatgatattcctcaagatgagcttcatttctacatcatcactccacctaagtatggtact
atcatccaaagacgtccagatggagatgtaccagtccttaacttcactcttacgcagatc
caaaatggcaatgatatcgtgtataagcatgatgactctgagactactgaagattcagtg
aagatcctgcttactgatggtactcatgaagtcactgaagaaatccccatctacattctg
cagagagatgatgagactccacgtgtcactatcaatgatggacttgatcttgaaattggc
gagatggagatcatcaccaaccgcatcttgaaagctactgatctcgattctcctgattcc
aacttgaccttcaccatcaggtttggaccaaggtatggtttgcttcaacgtctcgacaag
ttctctggcaacccaattgagaacataacagtcggcatgaacttcacacaatgggaaatt
gataaccagcgcatcaagtacacacacaccagcaacgaaggtggacgcgatcttatcaaa
tttgatgtgactgatggagagaacccactcatcgatcgctatttctatgtgaccgtcgac
catatcgataatgtgtacccagatgtcatcaatgcaggtgttactcttcaggaacatggc
cgtgtgactctcaccaccgataccatcagcaccagtgatttgaacagtccagatgaagat
cttctcttcaccatcactgaatcaccaaacaaaggacatcttgagcttacagacaaccct
ggcgtaccaatcacatctttcactcaactacaattggctggaaacaaaattgtttacgta
cacaccagtaccgatgagatgaaaatggacagcttccagttccaagtcacagatggtttc
aacactgttgtccgtaccttccgtatttcactcagcgaagttgataacaagcttccagca
gttacctacacaagtctcgcactcaaagagggcgccaacaaactgattactccatttgag
ctccgcattgatgatcgcgatactgatgatagcctcttgaagttcaccatcacccagctt
cctctccacggaaacatccttctcaacaagacccagcttgtcacaatgttcaccatgtct
gatctatacaacaacctcatcagctaccaacacgacggcaccgaaaccggagacgacagt
ttctctttcatcatctccgacggcacccacaacgacttcatcgtcatgcccaacaccgac
aaccccacacgcaaaccccagaaaatgcgcattgaaatcgtcccagtagacaatggtgtt
ccacaaatcgtcgtcaaccgatgggctccaactctgaatttgctgccatctggaaaccaa
ggttttgtgatcaccaacaagttcttgagagctgaggatcgggatagcgaggattcggac
ttggtgtacgtcatcacgaccccacccagatttggatacctgatgaacatcctcaatgga
aacatcagcatctctaactttactcaagatgatgtaaacaacatgtacatccagtatgta
ctctacccaggacagaacgctaccggtgataccttcttctttagcatccgtgatccaggt
ggtaatgaanctcccaaccaaccctaccaactcaactggtcttggatctcattggataga
gaatactacgaagtcaacgagaccacaagacacctgtctattctactcaacagacgtgga
tatttgggagagacatcttttgttggtatcagagcagttgatggaacagccaaagcagga
gaagacttcaatggcaagaaagcgcaacaggttcaattcaacccaggacagaccgaagga
ttatggagggtgcgaatcctggacgacacactctttgaacaggccgagacatttgaagta
atccttcatgatgccgtcatgggatccttggagtaccctgaacatgctatcgtcaggatc
ttggatggagaagatgagtccaccgtgttcatcgatgttcctgagagatacgtaattgaa
gaagatgttggagagctgttgattccaatccgccgtaccggagatctatctgaagagttg
atgatgatctgttctacaatgccagataccgctatcggatccaacccctcacctgtgcta
tcgtacatggactacatcagccgcatggaagaagatccagaaaactttgtccgtttcgac
aagggtgaagatgtcgcgtactgccgtgtgacgatcattgacgattctctgtacgaaacc
gaagaacaattccaggttaaactgaccatgcccatgggaggacgcattggattacccgca
tcggttaatgttgtcatcgcacctgatgcagatgatgagccttcattctacttcacggag
cccgaataccatgtggatgagagcgatggctacttggaggttcaagtatggcgtactgga
accgatctttcacagatggcgtctgtcaccgtgcgatctcgcaagtctacccccgtctct
gctgtgtctggtgaagattatgctggaatcagccgtaacttggactttgctcctggagtc
accatgcagactgtccgtgtatacatcctagatgatttaggccaaccactcttggaaggt
ccagagacatttgaattggtcctcaccatggctatgaatgctgtcctcggtgcacctgct
attaccgttgtcaccattaatgataccatctctgacttgccaaaggtacagttccgtaac
ccaagctatgatgtctgcgagaatgacttgacagtaagcgccatggtggtacgaagcgga
gatctgtccatccagagcacagtgcgttgctacaccagacaaggatcagcccaggtcatg
atggattacgatgagagacctaacacagaggcttccattattactttcttgcctggtgag
cgtcagaaggaatgcagtgtcctgctgatgaacgacaacgaatacgaacccaacaatgaa
cagttccgtctggtcttgaaccatccaagaacagagagtggattcgccgctatggttgga
gaactcaatgagactaccatcaatgtgtgtgatgatggagataagccaatcatcaagttc
ccacagaccaaattcagcatcgatgagccaaccgatatcgatagtgtatccgttatgcgc
atccctatcatccgtatgggagactcatctcagacctctgttgtcagggtacacaccaag
gatggatctgctaagagtggattggattataacccattgtcaagggaaatcacttttggc
tggaatgtaaccgaacagattgtagagattgagattctgcccgatgatgagaggaatgaa
atgagggaagctttcaccgtacacatcacaatggatgagaacatgattgctgaagtacag
atgaaccgtgctcttgtatacatcgagcaagaaggtcaagtgactggcgtaactttccca
tcaacccccattgttgtatctcttattgattacgacaacattgataatgcccaacagtac
ccaccacgtggatacccacttgtctgtgttacaccatgtaaccccaaacatccagaatac
tccaccactggccagatctgcgattctgaaaatgtaaatgataccttgactcaattccgc
tggatggttgccgctcctaccacagagaatggcgtcacctaccctctgaaggagatcaat
agtaacacattcttcacaagcacacatatgatcacccttgatagcatctactacggtcca
ggatcaagagtctcttgcgttgcccgtgccgtcagtaactacggtgacccaggtcgtgaa
cattacagtttgccaattaccatcagtaaagaagaaggaatgtgtctacccagagttgct
gatgccatcggtgctgagccatacaatgccagactgagatataccggacctaccgatcct
gattaccccaacaagattaagctcactgtcactatgcctcatgttgatggtatgctccca
gtcatctccaccagacaactcgccaactttgaacttgcccttagcccagatggtctcaga
gtaggtacccaccgatgctccaacttgctggacttcaacgagctaccaacccaatatggc
ttcatctccgaggagaccaagaaccccaacgtgatcggcgaggtcgttccataccagttc
aaccaggaccttcgtggaccaagcactttgagattctacaggaatttggatttggaagct
tgtttgtgggagttcaacgcctactatgatatgtctgagttgttggatgaatgcggtggt
gttgtcggcactgatggacaggttcttgatttggtccaatcctatgtgaatctgcgtgtt
ccgttgtatgtctcatacgtattccactccccagctggtattggtggatggcaacatttt
gaccagagatcagatcttcagttgacttttgtctacgatacatccatcttgtggcagaat
ggaattggcgcccagaccaccgactcaacactatcaggttccctgtacccaaccagtatg
cgtattgatgagaatggtagacttgttgtcaacttcagaactgatgctcaattcagaggt
ctctttgtcccatctcatccagcctctaatatgcagtccagtgtcacctcatcagatcaa
ccaggtttgacttacagtctaactctactcagatcagaaccaacatttgctcaaccagaa
cagctatggcagtttgtttccgatcatgccgtatctgactacagcggtaactacgtcatt
cgtctcatcccatgtaccaccatgccaaaccaggaatacagcgcacaaatcacatgtaac
ccacaagagaagataacctttgaccttccaatcagattccaacaggtcagcgatccagta
ccagcagaatatagtctcaacaccgagttcttgttgcttggcaaagagatgctgtggttg
tctgatggtagcatgggattcggagacggtgctgatgctgcattcgcaccaggtgatgag
atctatggccgtattcatgtggatccagtccagaacctaggtgatggattcaaccttaac
atcgagaaagtattcttgtgctcaggccgtgatggttacattcccaaatacaaccctgcc
aacagcgagtttggatgtgtagcagatacccctaacctcctctatgctttcaagattttg
gatcgtggagcaccagatacaactaccagatctttcagtggtgtaccttttaatgctacc
ctggctattgacaaccctactgctctgccacttgtacaacaagcaggtgctgatggcttc
agtatgggcagcaatgctctcttctcggtgagctctggtcgtcagtggtacctacactct
atatacacagtagaatcagccaatggcaatggaattgggaagcgaagtatcgagaggcac
agcctgatgggagcacccaactcaataaacagacgccgaagacaggcacaggaataccaa
cagcttgtcagcgatataggcagtgcagcaggcttaggaaccaacattcatcgtgtagca
ctttcaaataacaaaaatgatataacaaaccccaatcttggtggtaaatacaataagggt
ggtagctcagcgccagtggtgcctgttgtagccattataactgttctagccctagttttg
ttaataattattatagctgtaattgtaattcgcagacgacgtacgacgtctgtaaaagta
gtggccgttaacggtggtgctcaagtaatcgccgcaaatcatatggacgaaggtgacaac
acagaggtctga
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integrated database retrieval system
