Amphiura filiformis: 140161088
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Entry
140161088 CDS
T10871
Name
(RefSeq) LOW QUALITY PROTEIN: PAN2-PAN3 deadenylation complex subunit pan3-like
KO
K12572
PAB-dependent poly(A)-specific ribonuclease subunit 3
Organism
afil Amphiura filiformis
Pathway
afil03018
RNA degradation
Brite
Messenger RNA biogenesis [BR:
afil03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
140161088
mRNA degradation factors
3'-5' decay
Pan complex
140161088
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
140161088
NCBI-ProteinID:
XP_072040577
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Position
9:48800682..48824291
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AA seq
734 aa
AA seq
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MPPFSQAPPMFDPSNILPGMRGDGGMSSNFGPMKLSPPGENGPNPQAMEFVPGARNTAPP
GGIKEFMPPNIPPPPGPPPPGVPPPDFLPNLATDFPPLRHHAPHSSQPDVSTNDIMPEIP
EFVPRSIAAVLASHNQAQHLRNSTSATTLGPGGLHNSGSLSAGASPLHSPGDTPTASPAS
KRKDRPGSHPPPLDITGGFPYKPTMQENIGGTTYFYTEDQPAPLYDAAPPQSGVVIPNFH
IYPTPPAHVMYMKXKPNAPSFFMGEDLKMDILNKHSVVMAQANPTDDPSIPAEVDTYNSL
LPLEPLPKGPLEKSSTFGYTTTCYKAINKKDGKAYTLRRIHGFRMSNTQWMVLVDKWKKL
QHSNIVALREVFTTKAFGEHSTVFVHDFHAGAQTLMVRHFNHXGSADGFGGGGGGGGSGS
FNKGPKGSYMGSQGVGRGNLLNGPRQHAGLLPESLIWTYIVQLSSALRTIHTAGLACRVM
DPTKILICAKSRLKVNCVGIFDVLTFDQANPLAMISHYQQEDLVSLGKVVLVLACNSVQS
IQRHNIQTSMELVSRNYSSDLKNLIIYLLTNQPRPRSVNDIMPMIXARFYTQLDAAQMRS
DVLEEELAKEVQNGRILRLITKLGIINERPEFHGDPSWSETGDRYLLKLFRDYLFHQVTA
EGTPWIDMAHIVNSLNKLDAGVPEKVCLMSRDAQSVLVVSVADLKRCXETTFEEVVNTMA
EPVVVDDAPPPPVS
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgcctcctttctctcaggcaccacccatgtttgatcccagtaatattctcccaggcatg
aggggtgatggaggcatgtcaagtaactttggaccaatgaaattgtctccgccaggagaa
aatggtcctaatccacaagctatggagtttgttccgggagcacgtaacacggccccaccg
ggtggaattaaagagtttatgcctcctaatatcccccctccaccaggcccacctcctccc
ggtgtgcccccaccagacttcctgcccaaccttgcgactgatttcccgcctctgcgtcac
catgctccgcattcttcgcagccagacgtcagcaccaacgatatcatgccagagatccca
gaatttgtgccacgatcgatagcagcagtattggcaagccacaaccaggcacagcatttg
agaaatagcaccagtgcaacaacgttaggcccaggagggttacataattctggttcttta
tcagcaggagcttcacccttacactcaccgggtgacacccctacagcttccccggcatcc
aaacggaaagataggccaggaagccacccgccaccgttggacattactggaggatttcca
tacaaaccaacgatgcaagagaacattgggggcaccacctacttttatactgaagaccag
cctgcgccgctgtatgatgcagctccaccacaatcaggagtggttatacctaatttccac
atctacccaacgcccccagcccatgttatgtacatgaagncgaaaccaaacgctccttct
ttcttcatgggggaggatctcaaaatggacatcctgaacaagcactcggttgtcatggcg
caagccaatcctaccgatgacccaagcattcctgccgaagtggacacctacaacagctta
ttaccgttggagccgttacccaagggacctctggaaaagtccagtacttttggctacact
accacgtgttacaaggccatcaacaagaaagatggcaaggcatataccctgagaagaata
catggtttccgtatgagcaacacacagtggatggtattagtagataaatggaagaagctt
caacattccaatattgttgctctcagagaggtgtttaccaccaaggcgtttggagaacat
tccactgtttttgtgcatgacttccatgctggtgcccagaccttaatggtccggcatttc
aaccatnggggttcagcagatggctttggaggtggtggtggcggcggcggcagtggctca
ttcaacaaaggacctaaaggaagctacatgggttcacaaggtgttggcagaggaaacctg
ttaaatggtcccagacaacatgctggtttattaccagagagtcttatatggacctacata
gtgcagctgagctctgcgttacggaccattcacacggcgggtttggcgtgcagagttatg
gaccctacaaagatcctgatctgcgccaagtctcgactcaaagtgaattgtgttgggatc
tttgatgtgctcacctttgaccaagctaatccgctggctatgatctcacattaccagcaa
gaagacctggtctcattaggtaaagtggtgctggtccttgcttgcaactctgtacagagt
atacagagacacaatatccaaacatcgatggaactggtttctaggaattactctagtgac
ttgaaaaacctcattatctatttgttgaccaaccagcctaggccaaggtcagtcaacgac
atcatgccaatgatcngagcacgattctacacgcagctggacgcggcacagatgaggagc
gatgtgctggaagaagagttggcgaaagaggtgcagaatggacgtatccttagactcatc
accaaattgggcatcatcaatgaaaggccagaatttcatggagatccatcatggtctgag
actggtgaccgctacctgctgaaattgtttcgtgactacctgtttcaccaagtcacagcg
gagggtaccccatggatagacatggctcacatagtcaactctcttaataagctggatgcc
ggtgttccagagaaggtgtgcctcatgtccagagatgcccaaagcgtcctggtggtatca
gtcgccgatctcaaacgatgcnttgagaccacttttgaagaagtcgtaaacaccatggca
gaacctgtggtggtagatgatgcaccaccaccacccgtgagctaa
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