Amphiura filiformis: 140161147
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Entry
140161147 CDS
T10871
Name
(RefSeq) THO complex subunit 2-like
KO
K12879
THO complex subunit 2
Organism
afil Amphiura filiformis
Pathway
afil03013
Nucleocytoplasmic transport
afil03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
afil00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
140161147
09122 Translation
03013 Nucleocytoplasmic transport
140161147
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afil03019
]
140161147
03041 Spliceosome [BR:
afil03041
]
140161147
Messenger RNA biogenesis [BR:
afil03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
140161147
Spliceosome [BR:
afil03041
]
Complex C
Other components
EJC/TREX
140161147
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
140161147
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
TPR_19
Motif
Other DBs
NCBI-GeneID:
140161147
NCBI-ProteinID:
XP_072040680
LinkDB
All DBs
Position
9
Genome browser
AA seq
1378 aa
AA seq
DB search
MYEPITLCHMLGFKFQFYKEEDIATPESLYRVAALLMQHGLLQLDNLYAHLAPDDSEILQ
KAKLEMRAARTYARNMSMVILSDKGADKEDEDKDKIEKPVDNQKLGLCEALLNLGDWDHA
KQVIDRLPSNSAVSNPQIAKALCILVSKLIDPLYRRYGQPNGAKPRRVGSLTSPFALKPP
TRISELGPVFQVGCVLGPYASLDQVLLWKLLRLGKYIMKEKNSTKGGIRTDLEDVYRRLL
SLCEMVLLPSLSMIENNACISEAMWTLIKTFPYHIRYSLYGRWKNRMYNQYAPLIRMKAN
ALDKSKYIMKRLTKENVKQMGRQIGKLSHANPGVLFDYLLSQIQKYDNFILPVVDSLKYL
TSLSYDVMAYCVIEALANPEKERMKHDDTELSMWLQSLASFCGAVFRKYNIELTGLLQYV
ANQLKAGKSYDLLIMREIIQKMSGIEVTELMTADQLEALAGGELLRAEGGYFSQVRNTKK
SSQRLKEALLEDNLAVSLCMLMSQERFNIVFKHGTETHLKLVGKLYDQCQDTLVQLGGFL
ANLLNTDDYAKHLPALDILVLEYQLTADSAFFLHRPMCSHAIMSKYDELRKQDKLDKSSK
SSSSGSSQQKTQRYVEAVEAVIPPIVERVKALQSPKVWDEISPQFYVTFWTLSMYDLKVP
SNSYTKEIAKLDASVAALEDNKEMVSAKKRKEKERFNAIKDKLKDEEKKQQEHCSRVEAR
LKQECNAWFTQRSTKNETITQFLQHCIFPRCCFTASDALYCAKFVLTVHQLKTPNFSTLL
CYDRVFQDITYTVASCTENEASRYGRFLCAMLETVIRWHGDKAIYEKECSNYPGFVTVVR
ATGAGDSSNKADQLDYENFRHVCHKWQYKLTKALVACLESKEYTQIRNTLILLTKILPYF
PLVQNLGNVLEKRVDKIRADEKDKRPDIYALAMGYSGQLKSRKPHMLPEDKFHQKERVKS
ATSEAVFAKPNALAKPTASTLQLGQQQNGTSNSAASKKPAGTATANNSATAAVKENGTTG
VEEGSKTNATKERDPSTPDKTIGKTSTSSSTKRSSGSPAPSKKESKSDGKERSSKEEKAS
KDEKKEESKKEKSSKEGKSHKSHHKDKDVKGHKEDKGHKGEEKLSKGEKVKDHKLGKGHR
KEEKESHKRANTKEDEKVDTMIQGESEIKGHKDRMARSWSVASNSSQDSTASSSWKASPG
TETDRDHKRRKVEHSSSDGASGDVKDGSSKSRSKSRERITVEKDRERDERSRSMEKKGEK
KRDHSEGDRDSMEVKRRKEDESSSRRSSKSPSSKEEKKSKSSKSSGDAVNGERLSKKEKR
EERKEKKEAKEEAKKESREERRESREEGREAKEKKAKRESKEDGRDEDRHHSRKQRSR
NT seq
4137 nt
NT seq
+upstream
nt +downstream
nt
atgtatgaaccaatcacattatgtcatatgctgggatttaaattccagttttataaggaa
gaagatatagccacaccagaatccttgtacagggtagctgccttactgatgcagcatggg
ttactacaactagacaatctctatgctcatttggcacctgatgatagtgagatattacag
aaagccaagttggagatgagagctgctaggacgtatgccaggaatatgagtatggttatt
ctgtcagacaaaggcgctgataaagaagacgaagacaaggacaaaattgaaaagcctgta
gacaatcagaaacttggtttatgtgaagcattactgaaccttggtgattgggaccatgct
aagcaggtgattgacaggctacctagtaatagtgctgtgtccaatccacagattgctaag
gctctatgtatactagtcagtaaactgattgatcctctatacagaaggtatggacagccc
aatggtgctaaaccacgccgtgttgggtccctaactagtccctttgcactgaaaccacct
accagaatcagtgagttgggtccagtgtttcaagtgggctgtgtgttaggcccctatgcc
agcttagatcaagtgttgctatggaaactgcttcgtctgggaaaatacatcatgaaagag
aaaaactcaacaaaaggaggtatcagaactgacttggaggatgtttacagaaggttactc
tcactatgtgaaatggtgctacttccttctctgagcatgattgagaataatgcatgcata
tcagaggctatgtggacactcatcaaaacattcccatatcatataaggtactcactatat
ggtcgttggaagaacaggatgtataatcagtacgcgccacttatacgcatgaaggccaat
gctctagataagtccaagtacatcatgaagagattgaccaaggaaaatgtaaaacagatg
ggacgacagattggcaaactcagtcatgctaacccaggggtcctctttgattatctctta
tctcagatacagaagtatgacaactttattcttcctgttgtggattcactgaaatatctc
acctctctctcctatgatgtcatggcatattgtgtcatagaagcattagccaatcctgag
aaggagagaatgaagcatgatgacacagagttatccatgtggctacaaagtttagccagt
ttctgtggtgctgtattccgcaagtacaacatagagttgaccgggctgcttcagtacgta
gcaaatcaactcaaagctggtaaaagttatgatctgctcatcatgcgagagattatacag
aagatgtctggcattgaagtgacagaattgatgactgcggatcagttggaagccctagct
ggtggtgaactactcagggcagagggaggctatttctctcaggtgcgtaataccaagaaa
tcctcgcagcgtcttaaagaagctctgctagaagacaacctggctgtgagtctatgtatg
ctgatgtcgcaggagaggttcaatatcgtcttcaaacatggcacagaaacacatctcaaa
ttagttggcaaactctatgaccagtgtcaagatacgttggtgcaacttggtggtttccta
gccaatctactcaacacagatgactatgccaaacacctgccagcacttgatatacttgtg
ttggaatatcaattaactgcagacagtgccttctttctacatagaccaatgtgctcacat
gctatcatgtccaagtatgatgagttacggaaacaagacaagttggacaagagcagcaag
tcatcttcatcagggtccagtcaacagaagacacaacgctacgttgaggcggttgaggca
gttataccacctattgtagagagggtcaaagcattacagtcaccaaaagtctgggatgaa
atcagtcctcagttttatgtgacattctggaccttatcaatgtatgatctgaaggtgcca
agtaatagctacacaaaagagattgcaaagctggatgcctctgttgcagcactggaagat
aacaaagaaatggtgtcggctaagaaacgtaaggaaaaggagcgattcaatgccatcaaa
gacaagctgaaagatgaggagaagaaacaacaggagcattgttccagagtagaagcaagg
cttaagcaggaatgcaacgcatggttcacacaacgctctaccaagaatgagactataacc
cagttcctgcaacattgcatctttcctcgctgctgtttcactgccagtgatgccttatac
tgcgccaagtttgtgctcactgttcaccagctgaaaactccaaacttctcaacacttcta
tgctatgatagggttttccaagatattacctacacggtggctagctgtacagagaatgag
gcgagtcgctatggcaggtttctatgtgcaatgctcgagactgttatcaggtggcatggg
gacaaggcaatctatgaaaaggaatgcagtaactacccaggctttgtgactgtagtgagg
gcaacaggtgctggggattccagtaataaagcagaccagctggattatgagaacttcaga
catgtgtgtcataaatggcaatacaaactcacaaaggctcttgtagcatgtctggaatct
aaagagtacacacagataagaaatacactgattctgttaaccaagattctaccatacttt
cctcttgttcaaaatcttggcaacgtacttgagaagagagtggacaaaatcagggcagac
gagaaagacaagaggccagacatttatgcactggctatgggatattcaggtcagttgaaa
tccaggaaacctcacatgctgcctgaggataagttccaccagaaagagcgtgtaaagtca
gcaacctctgaggctgtttttgccaaaccaaatgccttggccaaaccaacagcatcaaca
cttcaactgggtcagcagcaaaacggaactagtaacagtgctgccagtaagaagcctgca
gggacagctacagcaaacaattcagcaacagcagctgtgaaagagaatggtactacagga
gtagaggaaggaagcaagacaaatgccacaaaagagagggatccatctacaccagacaag
acgatagggaagaccagtacttcatcatctaccaaacggtcatcgggtagtccagctcca
agcaagaaggaatcaaagtctgatgggaaggagcgctctagtaaagaagaaaaggcatca
aaagacgagaagaaagaagaatccaagaaagaaaagagctccaaggagggaaagagtcac
aagagccaccacaaggataaagatgtcaaaggtcacaaggaggataaaggtcataagggt
gaggagaaattgtcaaaaggagaaaaggttaaggaccataaattggggaagggccacagg
aaggaagagaaggaaagtcacaagagggctaacacaaaagaagatgagaaggttgacacc
atgatacagggtgaatcggagattaaaggtcacaaagataggatggcgaggtcgtggagc
gtggcatccaattctagccaggattcgacggcgtcatcctcatggaaggcgtctcctggc
acagagactgatcgagatcacaagaggaggaaagtagagcattcttcatcggatggagct
tcaggtgacgtgaaagacggatcaagtaaatcaaggagtaagagccgagagagaattaca
gtggagaaagacagagagagggacgaaagaagtagaagtatggaaaagaaaggtgaaaag
aagcgggaccattcagaaggagacagagattccatggaagtaaagagacgcaaggaagat
gaatctagttctcgacgttcatccaaatcgccaagttctaaggaagaaaagaaatcaaag
tccagcaaaagttctggtgatgctgttaatggtgaaagactgagcaaaaaggagaagagg
gaagaaaggaaagagaagaaagaagccaaagaagaggccaagaaggagagcagagaagaa
aggagagaatcaagggaagaaggcagagaggctaaagaaaagaaagccaagagggaaagt
aaagaagatggcagggatgaagacagacatcattctaggaagcagagatctcggtaa
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integrated database retrieval system
