Amphiura filiformis: 140162024
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Entry
140162024 CDS
T10871
Name
(RefSeq) phospholipid-transporting ATPase ABCA3-like
KO
K05643
ATP-binding cassette, subfamily A (ABC1), member 3
Organism
afil Amphiura filiformis
Pathway
afil02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
afil00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
140162024
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
afil02000
]
140162024
Transporters [BR:
afil02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
140162024
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
ACT_13
AAA_15
MukB
AAA_29
Motif
Other DBs
NCBI-GeneID:
140162024
NCBI-ProteinID:
XP_072041416
LinkDB
All DBs
Position
1:59664888..59701463
Genome browser
AA seq
1783 aa
AA seq
DB search
MAVLQISSANRIWLFIPVWKLYITLYTAKLQQIYHRDLIKMALGAFKQFILLSWKNWMLQ
KRKVWTTLFELGFPLLFSAILLIIRNFVPFEDYQTPTTYEAFEIDKLPNSLLPPDATSGW
PPYFWKLAYAPNDTIVGEIMEKTVENLQFGPVVRLSDSIGYPTEEELLDYFAAANSSISN
VLGGIVFHNEFSGDSIPSDPTYSIRLSANPKNAPLEFMDDATWLTTELFPFYQFPGPREK
NYTDGGMPGYLREGFLSLQYAIDKAIMELKGGNNNHTTLLQRYPYPPYFYDTYILILQTS
FPDLIMLSLVFVALNIAKSITHEKETKLKESMKMMGLSGWIHWAAWFVKSFVYLLITISV
MTLFFSIKVGKNHAAVVNNSDKSIVFIFLLLYAISTICFSFAISTMFTRANSAAVAAGVL
FLLTYMPYYFILFYYSNLTLAGKLSSALLHNTCMGLGGLLLGLYEGTGEGIQYSNINVPF
SVDDDLTFLHILLMFMVDIVFYSSVCWYVEAVFPGDYGVPQPWYFPFTQSYWCGSPTVTE
VYDAEGFMMESKNAEFFEADPSGVGVGISIRNLKKVFQGHDGVKVAVNGMSLNMYEGQIT
ALLGHNGAGKTTTMSMLTGLFPPTSGTAIVNGCNIKTNLQGVRSSLGLCPQHDVLFGDLT
VEEHLYFFAKLKGLDSKTQVQSEIEHYLSSMGLEDKRNQFSKSLSGGMKRKLSCGIALIA
DSKVVMLDEPTSGMDPDARRSTWDLLQRHREGRTILLTTHHMDEADLLGDRIAIMAEGEL
QCCGSSLFLKKKYGVGYHMVCVKDSHCDVSQVTNLVTSLVPNAGLESNIGAELSYVLPHE
SSANFESLFTNIETNKTNLGISSYGASITTMEEVFIKVGEKSDHTIEAKLHHIDEGKETL
PDSSSASSEDSCLKENTNTAYGALPSRSKVSPITTGNDSNVHMDTFGSTDQIIKSQINAN
HRNTGVALYFQQFYAMLLKHALHSLRNITVALVQLALPLIFVAIAIILVSLFPSSAPQPP
LEMTAAIYRASIAQYSCGENASTPLTESLCDKYAAYFKDTTETTNIDDETAIPHDMMEYL
LKFADDAINSFNSQNLVSATFQDSGEGEIVSTAWFNNQPFHCPPLALNAIHNAYAKHYID
PNFKITTINHPLPPNLQQQVQSESESFGTGSLVAFQMITGLSFLASSFAVFLITENTSKA
KHLQFVSGVQLSNFWLSTYLWDIINFMIPSLLICLMFWAAGVDSYGTDGRVWITLLILFL
TGWAIIPFTYLLSFLFREPATGYIRVLLINQIGTFIFYFLYELLALEGLNLKSVADILQL
IFLLMPLYTMGEAFETFYMQYSLKEVCTSFPPYSQIYCDVAGIPWETDYLAWGNGGIGVY
LVFLGVGGFFYFGLVFLVESQLIGKIKHHYARKRYQKTDNLIYSESGRARGVEEDEDVAA
ERKRITTLPMSQLEQDNMLIVKNLRKVYSLRGMRGNLLAVEDICVGVPQGECFGLLGING
AGKTSTFKMLTGDEAVTAGSAYLKGYSIKSDIKKVQQLIGYCPQFDALIDQMTGRETLTM
YGRLRGLSEKVIPLEVDRLLKALMLEPHADKFTKTYSGGNKRKLSTAIALMGDPPIVFLD
EPTTGLDPVAKRLMWDTICKVRDSGKSIILTSHSMEECEALCTRLAIMVNGQFKCLGSQQ
HLKNRFGAGFTVLAKSKFGQDLSGFKVYMERTFPGCKLKDEHQGMVHYHITDVSLHWAQI
FGSLEKAKTAFDIEDYSVSQTSLEQVFLNFARVQREDVGDGQR
NT seq
5352 nt
NT seq
+upstream
nt +downstream
nt
atggctgtgctccagataagttcggcaaaccgtatctggctgttcattcctgtttggaaa
ttatatattacattatacacagccaagttacaacagatatatcaccgtgatttaatcaaa
atggcgttaggcgccttcaagcagttcattctgctttcctggaaaaactggatgctacaa
aaacgaaaagtctggacgacactctttgaacttggatttcccctgcttttctcagcaatt
cttcttattatcagaaactttgtaccatttgaagactatcagacaccaactacctatgaa
gcatttgaaatagataagttgccgaattctttgctaccccctgatgccacaagcggatgg
ccgccatatttctggaaattggcatatgcgccgaacgatacaatagtgggagagataatg
gaaaagacagtggagaatcttcagtttggaccagttgtgcgcctgtcagattctattggg
tatccaacagaagaagagttactggactattttgctgctgccaactcatcaatctccaat
gtgttgggcggtattgttttccacaatgagttcagcggtgattccataccatcagatcct
acatatagcatcagattaagtgccaatcctaaaaatgctccgttggagttcatggatgat
gcaacttggcttactacggaattgtttccgttttaccaatttccaggaccaagggagaag
aattacacagatgggggaatgccaggatacttgagagaaggcttcttatcattacaatat
gcgatagataaagccattatggaactcaaaggaggcaacaataaccacactacactacta
cagcgctatccgtatccaccttatttctatgatacatatatcctgatattgcagacaagt
ttccctgatttaattatgttgagtcttgtgtttgttgcattgaacatagcaaagagtatt
acccatgagaaggagaccaaactaaaggagtcaatgaagatgatgggtttatctggttgg
atccattgggcagcgtggtttgtcaaatccttcgtctatcttctcatcactatctctgtt
atgacacttttcttcagtattaaggttggcaaaaatcatgctgcagttgtgaacaacagt
gacaagtccatagtgttcatattcctcctgctctatgctatttccacaatatgcttcagc
tttgctataagtactatgttcacaagagccaactcagcagcggttgcagcaggggtactc
ttcctcctcacctacatgccctactacttcatcttgttctattacagtaatttaactcta
gctggtaaactctcctcagcattactccataatacttgcatggggttaggtggcttgctc
cttgggctctatgaaggcacaggagaaggaattcaatacagcaatatcaatgttcccttc
tcagtagatgatgacttgacatttcttcacatccttctcatgttcatggtagatattgtt
ttctattcatctgtgtgctggtatgtggaggctgttttccctggtgattatggagtgcct
caaccatggtacttcccattcacgcaatcatattggtgtggaagtcctacagtaactgaa
gtctatgatgcagaaggtttcatgatggaatctaaaaatgcagagttctttgaagctgat
cccagtggtgttggtgttggtattagtattaggaatctcaagaaggtttttcaaggtcat
gatggtgtgaaagttgctgtcaatgggatgtctctcaatatgtatgaaggccagatcacc
gctctccttggccataatggagctggtaaaacaaccactatgtcaatgcttactggttta
tttcctcctactagtggcacagcaatagtcaatggatgcaatatcaagacaaacctgcag
ggggtcaggtcaagtttgggactttgccctcagcatgatgttctttttggagacttgact
gtagaggagcatttgtatttctttgccaagctgaagggtctggattccaagactcaggtg
cagtcagaaatagagcactacctgtcatcaatgggtcttgaagataagcgcaatcaattc
tctaaatcattatctggtggaatgaagagaaaactatcatgtggtattgccctcatagct
gattcaaaggttgtgatgttagatgaacctacatcaggtatggatcctgatgcaaggcgt
tccacctgggacctgttacagagacatcgtgaaggacgtacaattctgctgacaacgcat
catatggatgaagctgatctccttggagaccgcatcgctatcatggcagagggagaactg
cagtgttgtggctcatctctatttctcaagaagaaatatggtgttggttatcatatggta
tgtgtcaaagactctcactgtgacgtatcccaagttaccaatttagtcacatccttggta
ccaaatgctggcctagaaagcaacattggagcagaattatcttatgttctcccacatgaa
tcatcagctaactttgagagtctctttacgaatatcgaaactaacaaaaccaatcttggt
atatctagctatggtgcatctattactaccatggaggaggtgtttataaaggttggagag
aaatcagaccacaccattgaagccaagctacaccacatagatgaaggcaaagaaactctt
cctgattcaagctctgcatcatcagaagacagttgtcttaaagagaatacgaatacggca
tatggtgccttaccatcaagatctaaagtgagtcccataacaacaggaaatgatagcaat
gttcacatggatacatttggatccacagatcagattatcaagtcacagataaatgcaaac
catcgtaacactggtgttgcactctacttccaacaattctacgcaatgcttctcaagcac
gccctccatagcctccgtaacatcactgttgctctcgtccaattagcactgccactcata
tttgttgctattgcaatcattttggtctccttgtttccaagcagtgctccacaaccacca
ttagaaatgaccgctgcgatatacagagccagtatagcgcaatattcttgtggtgaaaat
gcatcaacaccacttacagagagcctgtgtgataaatatgcagcatacttcaaagatact
acagagacaaccaacattgacgatgaaacggccataccacacgatatgatggagtacctg
ctgaaatttgcagacgacgctatcaacagtttcaattctcaaaatcttgtgtctgctact
ttccaagattcaggggaaggggaaattgtttcaacagcttggttcaataatcaacccttc
cattgtcctccgttagcattgaatgcaatacacaatgcatatgcaaaacactatattgac
ccaaatttcaaaattacaacaatcaatcatccactaccacccaatcttcagcaacaagtg
caatcggaatcagaaagctttggaacaggaagtctcgttgcttttcaaatgatcactgga
ctctcattcttagcgagtagttttgcagttttcctcatcacagaaaatacatcaaaagca
aaacatctgcaatttgtcagtggagtacaactttcaaacttttggctatccacatatcta
tgggatatcatcaattttatgatcccatctttgcttatttgcttaatgttctgggctgct
ggtgttgattcatatggtactgatggaagagtttggatcaccctgttgattctattccta
acaggctgggctattatcccattcacatacctgttatcattcctattccgagaacctgct
acaggatatatccgtgtgttactcatcaatcagattggaaccttcatcttctatttcctc
tatgaactcttagctttggaagggcttaatttgaagtctgtggcagatattttacaattg
atctttttgctgatgcctttgtatactatgggtgaagcatttgagactttctatatgcaa
tactcactcaaggaggtatgcacgtcattcccaccatacagccaaatatattgtgatgtt
gcaggtattccttgggagactgactacctagcctggggtaatggaggtataggagtgtac
ctggtgttcttaggagtggggggattcttctactttggtctggtattccttgttgaaagt
caactgattgggaaaatcaaacatcattatgcaagaaaacgctatcagaaaacagacaac
ttaatatacagtgagtcaggaagagcaagaggagtagaggaagatgaagacgtagctgca
gaaagaaagcgcataacaactttgccaatgtctcagcttgagcaggataatatgctgata
gtcaagaatctaagaaaggtatattcactgaggggaatgagaggaaacctgctagctgta
gaagatatatgtgtgggtgtgccacagggagagtgctttggccttcttggtatcaatgga
gcagggaagaccagtacattcaagatgttgacaggagatgaagctgtgacagctggctct
gcatatctcaagggttatagtatcaaatcagacatcaaaaaggtgcagcaactcataggc
tattgtccccaatttgatgctctgattgaccagatgactggacgggagacccttaccatg
tatggacgtcttagaggactctcagagaaggttatacctttagaggtagacaggctgctg
aaagctctaatgctggaaccacatgcagataaatttactaagacttacagtggtggtaac
aagagaaagctgagtacagccatagctttgatgggagaccctcctattgtgttcttggat
gagccaacaactggtttagatcctgtagctaagagacttatgtgggatactatatgtaaa
gtcagagacagtggaaagtctattattcttacatctcacagcatggaggaatgtgaagct
ctatgtaccaggttagccatcatggtgaatggacaattcaaatgtcttggaagtcaacag
catctcaagaacagatttggtgctggatttactgtactagcaaaatctaaatttggacag
gatctgtctggcttcaaagtgtacatggaaaggactttccctggatgcaaactaaaggat
gaacatcaaggcatggtgcattatcacattactgatgtatctctacactgggcacagatc
tttggttcactagagaaagctaagacagcctttgatatagaggactattcagtcagtcag
acatcactagaacaagttttcttgaactttgctagagtgcagcgtgaagatgtaggggat
ggtcagagatga
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integrated database retrieval system
