Amphiura filiformis: 140162493
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Entry
140162493 CDS
T10871
Name
(RefSeq) vacuolar protein sorting-associated protein 11 homolog
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
afil Amphiura filiformis
Pathway
afil04140
Autophagy - animal
afil04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
afil00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
140162493
04148 Efferocytosis
140162493
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
afil04131
]
140162493
Membrane trafficking [BR:
afil04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
140162493
Hops complex
140162493
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PEP5_VPS11_N
TPR_PEP5_VPS11
VPS11_N
VPS11_C
Clathrin
TPR_Vps41
zf-C3HC4_2
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR3_1st
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3H2C3
WD40_CDC20-Fz
Beta-prop_EML_2
zf-RING_5
Phage_phiTE_072
Beta-prop_WDR3_2nd
WDR55
TPR_11
CENP-Q
Beta-prop_HPS5
Motif
Other DBs
NCBI-GeneID:
140162493
NCBI-ProteinID:
XP_072041834
LinkDB
All DBs
Position
10:complement(11057013..11102820)
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AA seq
1119 aa
AA seq
DB search
MAFLQQWRRFNFFDKEVVKNPQTSEIFNKIQDIDITTCASGRGQIIFGDTRGILYFLDRS
MQLTDFKAYEERVTHLHQLKQHNILVSIGQDESGINPVIKVWNLDKKDKTNNPTCTRYTR
AIPGSNNPSQVSSLTVSENLNMMAIGFMDGSVTLIRGDVTRERHSKSRTIHQDKTPVTGL
AFRHSQRNTFLYVVTETCTLSFNLTGKEPRKEVLDLHGCPFHCSVMSDATQDNQFLIGRS
DAVYFYQPDGRGPCLAFEGQKTILHWFRGYLVVVTKDSKTLPRSVAGEGPPRIMDIVTVY
DIQNKFIAYSAPVPEVLDVIQEWGSIYILGGDRKLYHLQEKDTQTKLEILFKKNLYIPPS
SNLAKSQHYDYDGLIDIFTQYGDHLYSKGDHDGAIAQYIRTIGRLEPSYVIRKFLDAQRI
HNLTAYLQALHKETLANEDHTTLLLNCYTKLKDNSKLDEFIMTKDKEVTFDVETAIKVCR
QAGYYEHALFLAEKHNQHNLYLKIQLEDIKDYQKALTYIAKLDFEEAMDNMKKYGKMLMS
EVPTQTTDLLKLLCTDYKPSDKPLVDPASLSGDVIVPPLVHKAPAEEFIHIFVNNSSQLM
EFLEHMTKVQQDSPSLIYNTLLELYLHDLAHVEIKEKATKKELERKAMDLLQTSDSHYDI
DQALILCQMHNFKKGILFLYEKGKLYQQILHYHMEHDEYDQIIDACKRYGTQDSNLWVQA
LSYFAGREDNCKQYIVEVLSQIDRRNLLPPLIVIETLAHNSTATLSVVKDYIIRRLQQEN
DQIADDERLIKQYREETEKMRTQIEEMKTNAKIFQVSKCSVCNHKLELPSVHFLCQHSYH
QHCFDSYADNDQECPACAPENHKVLDIIKAQEQGRDLHEQFHRQLEKSQDGFSVVAEYFG
RGVFNKVTLLTDSNKSSPARQQSSPASRPVTTPQPISKPPPSTRIPASVQPQITPAQPQP
QRAYTTPGIPTRAAAAPYSAPTQAPARASQPVPRITPPQQRVPQTSMQRPSTPDSSKSSP
RRTPTSTTPQSSLPGTPQRGASPKPDYSDSLNPFAEGGTGKASKPAVGGGTMNPFTGRPY
SPTEAAGKNPFEEAPPAGTNPFGDEAEEEDDGSYNPFFN
NT seq
3360 nt
NT seq
+upstream
nt +downstream
nt
atggcatttttacagcagtggaggcgtttcaatttctttgataaagaagtggtaaagaac
cctcaaacctctgagatcttcaataagatacaggatattgacatcacaacatgtgccagt
gggcgtggtcaaatcatctttggcgataccagaggtattctgtactttctggatcgtagc
atgcaactaacagacttcaaggcgtatgaggagagagttactcatctacatcagctcaaa
caacataatattcttgtgtcaattggacaagatgaatctggaattaacccagttataaaa
gtatggaacctggacaagaaagataagacaaataatcctacatgtacccggtacactaga
gccatccctggtagcaacaacccatcacaggtgtcaagtctgacggtcagcgagaacttg
aatatgatggctattggatttatggacgggagtgtcaccctcatcagaggggatgtaacg
agagagaggcacagcaaatcacgtactattcatcaagacaagacacccgtcacaggcctg
gcattcagacactcacagcgcaacacattcctgtatgtcgttacagagacatgcacactg
tctttcaatctaacgggcaaagaaccaagaaaggaggtactagatctgcatgggtgtcca
ttccattgttcagtcatgagtgatgcaacacaagataaccagtttcttattggaagatca
gatgctgtatatttctaccagccagatggtcgaggaccttgcctagcatttgaaggtcag
aagacaattctgcactggttcagaggttacttagtagtagttaccaaagacagcaagaca
ttacctagatctgtggcaggggaaggacctcccagaatcatggatattgtcactgtttat
gacattcagaacaagtttatcgcctactcagcccctgtacctgaagttcttgatgtcatc
caggaatggggatcaatatatatactaggaggagatagaaagctttatcacctacaagaa
aaagacacacagaccaaactggagattctcttcaagaaaaacctgtatataccgccatca
agtaatcttgctaaaagccagcattatgactatgatggtctcatcgatatcttcacacag
tatggtgaccatttatacagtaaaggggatcatgatggggctatagcacaatacatcagg
actataggcaggcttgaaccatcttacgttatcagaaagttcctggatgcccaacgtatc
cataacttgacagcgtatttgcaagcattacacaaagagacccttgccaacgaggatcac
accacactattactgaattgctacacaaaactgaaggacaacagtaaactggatgagttc
atcatgacaaaagacaaggaagtgacttttgatgttgaaactgctattaaagtatgtagg
caagcaggatactatgagcatgcactgttcttggcagagaagcataatcaacacaatctc
tacctgaagatacaactagaggacatcaaagattaccagaaagcactcacatatatcgct
aagctggactttgaagaggccatggataacatgaagaaatatggcaagatgttaatgagt
gaagtgcctacacagacaacagacctgctaaaattgttgtgcacagattacaaacctagc
gacaaaccattagtagacccagcctctctgtcaggtgatgtcatcgtaccaccactagta
cataaagcacctgctgaagaattcattcacatatttgtcaacaactctagccaactcatg
gaattcttggaacatatgacaaaggtacagcaagactcacccagccttatatacaacaca
ttactagagctgtacctccatgatttagcccatgtagaaattaaagagaaagcaacaaag
aaagagttggaacgcaaagccatggacctgctgcagaccagtgattcacattatgacatt
gaccaagcacttatcctctgtcagatgcataacttcaagaaagggattctctttttgtat
gaaaaaggcaaattatatcagcagatccttcactatcacatggagcatgatgaatacgac
caaattattgatgcctgcaaaagatacggaacacaagattctaatctgtgggtgcaagcg
ttatcatactttgccggcagagaagacaactgtaagcagtacattgtagaggtgttatca
cagattgataggcgtaatctgttgccaccgttaatagtcatcgagaccttggcacacaac
tctacagctactctctcagttgttaaggactacatcatcagaaggttacagcaggaaaat
gatcagatagcagacgacgagagacttattaaacagtaccgggaagaaacagagaaaatg
agaacgcaaattgaagaaatgaaaacaaatgccaagatattccaggtttctaagtgtagt
gtgtgcaatcacaagttggagcttccatctgtccacttcctttgtcaacattcctatcat
caacattgttttgatagctatgcagataatgatcaggaatgcccagcctgtgccccggag
aatcacaaagtattagatatcattaaggctcaggaacaaggcagagatctacatgaacaa
ttccatcgacagcttgagaaatctcaagatggtttttccgtagttgctgaatattttggc
aggggagtgtttaataaggtgacattactgacagattccaacaaaagctcaccagcaaga
cagcaatcatcccctgcatcaagaccagtaaccacccctcaaccaatatccaaaccaccc
ccatcaaccagaataccagcgtcagtccaaccacaaatcaccccagcacagccgcaaccc
caacgagcatacactacgccagggatacccacaagagcagctgctgcaccatactcagca
ccaactcaagcaccagcacgagcatcgcaacctgtaccacgtataactccaccacagcag
agagtgccgcaaacttcaatgcagagaccttctacaccagactcgtcaaaatcaagcccg
agacgaactcccacttcgacaactccgcaatcttcccttcccggtaccccacagagagga
gcatccccgaaaccggactatagcgactctttgaatccctttgcagaagggggcactggt
aaggcatctaaaccagctgtgggtggtggcacaatgaatccctttactggcagaccatat
tcaccaacagaggccgctggtaagaatccatttgaagaagcgccccctgctggtaccaat
ccgttcggtgacgaagcagaagaggaggatgatgggagttataatccgtttttcaactaa
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