Amphiura filiformis: 140162538
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Entry
140162538 CDS
T10871
Name
(RefSeq) 3'-5' exoribonuclease 1-like
KO
K18416
3'-5' exoribonuclease 1 [EC:3.1.-.-]
Organism
afil Amphiura filiformis
Brite
KEGG Orthology (KO) [BR:
afil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afil03019
]
140162538
03036 Chromosome and associated proteins [BR:
afil03036
]
140162538
Messenger RNA biogenesis [BR:
afil03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
140162538
Chromosome and associated proteins [BR:
afil03036
]
Eukaryotic type
Gene silencing
RNA interference (RNAi) pathway
Other RNAi proteins
140162538
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
ProQ
YezG-like
Motif
Other DBs
NCBI-GeneID:
140162538
NCBI-ProteinID:
XP_072041889
LinkDB
All DBs
Position
10:complement(14184868..14200114)
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AA seq
369 aa
AA seq
DB search
MTDIILVTVTALVGLGTVIFLILNFSRRRTMASASHELQNVAKRMKCSADSSPDRMKQCS
PPRHLETEELPCSSGDGPSASGLASSKRETHPNAYKEDKDEKKNFKHGVFKKISRKNGEI
NQLSKQKIKVMLSELKLDQRGSGDVVKARLKNHFKNQLLGEAGMETTCTQRRYDYICVID
FEATCDEPSPPDYLQEIIEFPVVLLNTHTLEIEESFTHFCKPVINPKLSDFCKVLTSITQ
AQVDHADTFPVVLNKVKEWMDSKGLGTTHTFAVAADGPWDMNYFLNIQCELSEIPFPEYA
KRWVNLSKAFSNFYKTHRMNLLSMLTTLELSFKGRQHRGIDDAKNIARIAIQLLQDGCDL
QVNESLQQD
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgactgacataatcttagtcacagttacagctttggttggtttagggacagtaattttt
ctgattcttaatttctcgaggcgccgaactatggctagtgcctcacacgaattgcagaac
gttgcaaagcgtatgaagtgttctgctgattctagccctgaccgaatgaagcagtgttcg
ccacctcggcatcttgagacagaagaattgccatgttcaagtggagatggccccagtgca
agtggattggcatcttctaagagagaaacacatcccaatgcttataaagaagacaaggac
gaaaagaagaatttcaagcatggtgtgttcaagaagatttcacgcaagaatggcgaaata
aaccaactcagcaaacagaagataaaagtcatgttatcagaactcaaacttgaccaaaga
ggatcaggtgacgtcgtcaaagcaaggttaaaaaatcacttcaagaaccagttgctagga
gaagccggtatggaaacgacctgcacccagcgtagatacgactacatatgtgtgatagat
tttgaggcgacgtgcgatgagccatcgccacctgattatctccaggagattattgagttc
cctgtggtccttttaaatacgcatacactagaaatagaggaatctttcacccatttttgt
aaaccagtcatcaaccctaaactgtctgacttttgtaaggtgctcacaagtataacacag
gcccaagtagaccatgcagacacatttccagtagtattaaacaaagttaaggagtggatg
gacagtaaaggattggggacgacacacacatttgctgttgcagccgatggcccgtgggac
atgaattacttcctcaacatccagtgtgaactcagcgagattccatttccagagtacgcc
aaacgatgggttaatctatccaaggccttcagtaacttctacaaaacccaccgcatgaac
ttgttaagtatgctgacaacgctagaattatcatttaaaggaagacaacacaggggtatt
gacgatgccaaaaatattgcgagaattgcaattcagttattacaagatggctgtgatctg
caggtcaatgagtcattacaacaagattga
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