Amphiura filiformis: 140162879
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Entry
140162879 CDS
T10871
Name
(RefSeq) LOW QUALITY PROTEIN: huntingtin-like
KO
K04533
huntingtin
Organism
afil Amphiura filiformis
Brite
KEGG Orthology (KO) [BR:
afil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afil03019
]
140162879
04131 Membrane trafficking [BR:
afil04131
]
140162879
03029 Mitochondrial biogenesis [BR:
afil03029
]
140162879
Messenger RNA biogenesis [BR:
afil03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
140162879
Membrane trafficking [BR:
afil04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
140162879
Mitochondrial biogenesis [BR:
afil03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
140162879
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Htt_N-HEAT
Htt_C-HEAT
Htt_bridge
Htt_N-HEAT_1
HEAT_GCN1
HEAT_GCN1_C_2
TrkA_N
Motif
Other DBs
NCBI-GeneID:
140162879
NCBI-ProteinID:
XP_072042284
LinkDB
All DBs
Position
10:complement(41722176..41838847)
Genome browser
AA seq
3029 aa
AA seq
DB search
MSKPISMANMEKLARAFEALKTHQQAGTTPKADQSPTPGRKKDNSLTKKDRIGHCTTIAE
GICASNFRTVAEFPKFLGIAMELFFAACDDEESDVRLKADECLNKIVRASMDGNLGRVQL
ELYKEIKKNGSSRSLRAAMWRFAEMAHLIRPQKCRPYVINLLPCIAKVSRRQEDAIQESL
TNFLQKILPILGSFLTDTEVKNLMKVLFPNLKNASAATRRTAANCLTLICQYGRKPNLYF
AWLIQALLMFVVPVKEDRNSQMLLGVMLCLRHAIPHLASQEVKDHSMKGSFGVTKQEAIT
GVTSEQFLQIYEFLLYCTQHADHNVLTATLETLQQLLRTPPPPLLKMLLSPDGLPSKLIF
PAEQDRGKPEEEEDETSVSSSMPGVFGDSNLDEDQDGASSLATAASSISGDTSSQTNLSD
IGIDTASEGTSDAPTLKSFESSLLSGESGYPDSIPDDSDVILNEEEDDEYSNIEIGNVAD
DSIPTVDIERDLIEQTEELHIRVEDEERLSDMQRDSSTEFLRVEDSSEFQDDTTSREDSS
AKSSPTTEVKTRKGDIGDYIEPEVPLTHCTRLLCSSYLLTGYGGGLLPDRHVRISVKALA
IGCVGCIVGMYPKAFYTRLFKPGSADNAEEEEQLVRDILLYITHSDPQLRAQTAVLLGNL
LHSSLMQSRFDFNGWCWDVCQQQLQTDPVSLDYLVSLLTTVLSDESTVTVRAACSAVKIC
YPDLCNSIHGNLALQLTFDLLEHLSNSSYWLVQVELLDLISRIDFKLIYFLEQQQHQLLG
TQRSLHKVSSIQDIILEDIVMESLASEDARVRHAAAEATIRLVPRLFFAVDHPRQEPLSA
LAKENASQYLDPVISDPLPYMQSHTDAMMSVGIFGSMIESKSVTFDSALSRVVNMIILTL
NSSATKFLTYGCCHVLCRLSMNYSVTMHPNSWSCATSLSPLAKDKGSLHRTDSHRSMGST
GGAGSYGSGGSRGHVSIEELCMGSGCGPLPLIVSSITSSILMLDLSAHQDTLLLAGNMLI
GAAYHSLKTQRANTKPHSSPKKGAPEEPTVHWSCLQNRLLVPLVEQLIQHITRLLSICAH
VVDSTQPGPPKAQTSLPSLPSGPSLSPIKRKAKGKDGNPEQGATATPSPTKPNQDKQEGG
EEKKNIKATFGAFYHLPQYMRLYEIMRGAYNNYKVTLELGRVDKFASLLKTALDTFSQLL
EITTMNEIGKHTEELLGYLKTCFLIEPTATILTVEQLLKALFFTNMASHSDLPSASGPRK
PGKATRLTANMKPGLYHDCFIAPYTQYTQSLTSMGPKVGAGVESDNESTGWFGWVKSKID
RRGSISKLGSKEKSSVHGYIRLFEPLVIRALKQYTVTSSIPLQQQVLHLLAQLVQLRVNY
CLLDSDQIFIGFVIKQFEYMEEGQVKDYETLIPHIFHFLVLLSYERYHSKAVIAMPKIIQ
LCDGIMASGQQATTHAVPALRPLVHDLFVLRGSSKSDAVKELDTQREVVVSMLLRLIYYY
EALEMFIPVLHQAHRESEDKWKRLSRQVVDMILPLLARQQINLDSQEALDTLHHLLAAVA
PSALRPVDILLKTMFLVPYDTVDKISMQRWLGMVLSILNVLISQSKEETILSRLQELGLT
NDLFVCPVEDEKARKEDIVNANISPPEEVMARFLLQVIGFTVLAIQKGTGIAVTEKTNHF
IHSQLSHLLLYVTHMFKSGGFRKVCTVMSSMIHSSTQSSCWFTLHQLNAAFMDLVSFDPI
LVLQWSQVLLLLNYNEQEWWGXILHTPKRXPLSKSLSSGSLDNLEDNQDISKSCPSDIVK
KAALVVFCDFVCENQTDVEPLTFLVVNHVNDIIQLSHEPPVQDLISAIHRNSAASGLFLR
AVNLRFSHYHDPCMVKRTLQSLEGIHLSQSGVLLMLLIERFLNTHQQAVSRLCDSIACRR
VEMMLAERLEDTTNHLSLEDLERLEGNMQSHKLDKRHPRLYSLLSRLKAGLTRHEPHNSP
ASKDLKTEDFTVMPNKEWFLSVVQDCCHGNRAVSARECSLLVAQLDPQDIPAIMKHEEFS
CSLLKDSIVVGLERTKYQLQMPSSVDTSQIVPDSQEERPHAIDRPPKPLVLDPLLRTACT
TLLSRIHNIVAALPPQHRVVRTDSRRETDRVYRAKLMEFFQDGGWCNTLYDLAAALVKYL
VSARTLQQNIPADRLEDIGQFAISCLEVTRWLLEESLHGVSSNRLQVCMECMALVLQNNQ
LCNLTSQASHVTWVCAAVSCVHYITNAVCDEKTDNADSARGELGSLSKEPEEFQQVCRQT
AELIELLHLPSTSDSSILSTIPQFLQKPLRNVVVGLARLPLVYGYARTPPFVWKLGWNPS
LRGNSQDMPPLPMEYLKEKEVLREFIVRANTIGWTSRQQFEETWAGLLGVFSSPDIPEEM
AIEEDIEHSQAACLAVCTISSLLVNSLLHPQPGNPTNSIIRHIPRHGNEEMPFLHSPSGR
KLVWLRQVVEREMQAMQSVRCDVTIVNGMPKSSLEVADVMFGANLEREPEYMGFDLSQIS
VHGIWALHNMLPPLVDSSEGGPAPVATSPVRLPGNLDVHSCLMFLLELYGQWLSPTPTPK
TPLMLLCETVKSVLVISDVFTQRGQFEWMFDTLLEVHKNHPVEDELVTQYVIPGICKAAA
VLGLDRDVSEKISKLLEVTLRSTHLPSKIGALYGSLYLLESDAIEDIDFIIPVVSEYIMK
NLKPVSHCSSTVSQRHTLIMVATAFYIIEYFTEDIKATEFTKVTLQNCLIMCTVSDEATN
MMVYHAIMRGLERLLIAKVLNAADTEVLTKLGVDRLCMPSPVHALAALGLLLTSMYTGVL
KTHQPTDAIGQSESNHESHDPEKLVMAMERVSILFDRIRKGYPSEARAVAQILPAFINDF
FSPQDIINKVIGEFLSNQQPHPQLMALVLFKVFGSLHHRGQASGVRDWVMLSLSNFTQRT
PVAMAIWSLTCFFISASTNQWIRALLPHVISRMGKLETLDRKYFLLVARDFFRNQISDDT
SKRSFISTFQSVALAASADHVYAQLLNHI
NT seq
9090 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaccaattagcatggctaatatggagaagttggcacgggcctttgaggctctg
aagactcatcaacaagcgggaacaactcccaaagctgaccaatcaccgacccctggcaga
aagaaagataattccctgactaaaaaagacaggattggacattgcaccaccattgcagaa
gggatatgtgcatccaactttagaactgtagcagaatttcccaagtttttgggcattgct
atggagctgttttttgcagcatgtgatgatgaggaatccgacgtacggcttaaagctgac
gagtgtctcaacaaaattgtcagggcctctatggatggcaaccttggtagggtacagctg
gaactctacaaagaaataaaaaagaatggatcctcaagaagtctgcgtgcagccatgtgg
cgatttgcagagatggcacatttgataagaccacaaaagtgccgtccgtatgtgatcaac
ttgctgccttgtatagccaaggtatcacgacgccaagaggatgccatacaggaatccctg
actaactttcttcagaagattctaccaattttaggctcatttctcacagacacagaagtt
aagaacttgatgaaagtgctgtttcccaacctgaagaacgcctcagctgcaactagacgt
actgctgccaactgtctcactctcatatgccagtatgggagaaagccaaacctgtacttt
gcttggctcatacaggcattgctcatgtttgtggtaccggtgaaagaagatcggaattcc
cagatgttattaggagtaatgctttgtctcagacatgctataccgcatcttgcttcacaa
gaggtcaaagaccacagtatgaagggaagttttggagttaccaagcaagaagctattact
ggagtaacctcagaacaatttttacagatctatgaattcctcctgtactgcactcagcat
gcagaccacaatgtcttgacggccacgctggaaacgcttcagcagttgctgcgcacacca
ccgccacccctgctgaagatgctgctctcaccagatggtctgccttccaagttgatcttc
cctgcagaacaggacagagggaaacctgaggaagaggaagatgagacttcagtaagcagc
agtatgccaggtgtttttggtgattccaatctagacgaggaccaagatggcgctagctcc
ttagcaacggcagccagctccatcagtggcgacacctcctcccagaccaacttatctgac
attggcattgacactgcatctgaagggacatctgatgccccaacgctgaaatcctttgag
tcttctctgctctctggggaatcaggttatccggattcgatcccggacgattccgatgtg
atcctcaatgaagaagaggacgatgagtattcaaatatcgagatcggaaatgtggcggat
gattcaataccaacagtggatatcgaaagagacctgatagagcagacggaagaacttcat
atacgagtggaagacgaagaacgattaagcgatatgcagagggacagttccaccgagttt
cttcgagtggaagattcgtcagagtttcaagatgatactacgagtcgggaagattcttcc
gctaagagttcaccaacaacagaagtcaagacaagaaagggtgatataggagactacatt
gaaccagaggtccctctaacccactgcactcgccttctatgctcatcatacctgctcact
ggatacggcggtggcttgctaccagacagacacgtgcgtatcagtgtgaaggcgttggct
atcggttgtgttgggtgcattgttggcatgtaccctaaagcattctacaccagactcttc
aagccagggagtgctgataatgccgaagaagaggagcagctggttcgtgacatccttcta
tacatcacccattcagaccctcaattgagggcacagacggcggtattattaggcaacttg
ctacattcctcattgatgcaatcaagatttgacttcaatggttggtgctgggatgtgtgt
caacaacaactccaaacagatccagtaagcttagactatttggtttcattacttacaact
gtcctatcagatgaatcgacagtaacagtaagagcagcatgctctgcagttaagatttgc
tatccagacttgtgcaatagtatccatggtaacctagcgttgcagctgacatttgacctt
ttggaacatcttagtaacagttcctattggttggttcaagttgaacttttagatcttatt
agcagaatagattttaaattaatatattttttagaacaacagcagcaccagttgttaggg
acacagagaagtctacataaggttagcagtattcaagatattattttagaagatattgtg
atggagtctcttgccagtgaagatgcccgtgtaagacatgcagctgcagaagcaacaatc
aggttggtacccagactattctttgcagtggaccatccaagacaagaaccactctctgct
cttgccaaagaaaacgccagtcagtatctagacccagtgatcagtgatccattaccctat
atgcagtcacacacagatgccatgatgtcagtgggtatatttggcagcatgattgagagt
aagagcgtgacctttgactctgcattgtccagagtggtcaatatgatcatactgacgttg
aacagttccgctactaagttcctgacgtatggttgttgtcacgtgctgtgtcgcctttcc
atgaattactcagtaactatgcatccaaattcgtggagctgtgcaacatcgttatcacct
ctggctaaagataaaggctctcttcatcggactgatagccatcgctctatggggagtaca
ggtggtgctggcagttacggcagtggtggtagtcgtggtcatgtcagtatagaggaactg
tgcatgggttcagggtgcgggccattacccctcatagtgtcatccattacatcatcaata
cttatgttagatctgtctgcacatcaagacactctgctgctagcaggcaatatgctaata
ggtgctgcctaccattcactgaaaacacagcgtgctaataccaagccacatagtagccca
aagaagggtgctccagaggaacctacagtccattggtcatgtctacaaaacaggctattg
gtaccgctagtagaacaactaatacaacatatcactaggctactcagtatatgtgcacat
gtggtggattcaacacagcctggtccccctaaggcacagacttcgttgccatcactccca
tctggcccatcactaagtcctatcaagaggaaagccaaaggtaaagatggcaatcctgag
caaggagctactgctacaccaagccctaccaagcctaatcaagacaagcaagaaggaggc
gaagaaaagaagaacatcaaagccacatttggagccttttatcacctcccacagtacatg
agactatatgagattatgagaggagcttacaataattacaaggtaacccttgagttaggc
cgagtagacaagtttgccagtttactcaagacagcattggatacattcagtcaactactg
gagataacaacaatgaatgaaataggcaagcacacagaggagttgcttggatatctcaaa
acatgtttcctgatagaacctacagctactattctgactgttgaacagctgttgaaagct
ctgttcttcaccaacatggccagtcactcagacctaccatcagcctcagggcccaggaaa
ccaggcaaagctaccagactaacagccaacatgaagccagggttatatcatgactgtttc
atagcgccatatacacagtacacacagtctctgactagtatggggcctaaagtaggggct
ggggtggaatcagataatgagagtacaggatggttcggctgggtgaaatccaagattgac
aggagaggttcgatatcaaaactgggtagtaaagagaagtcatccgtgcatgggtacatc
cgtctatttgagcctcttgtcataagagcattaaagcaatatacagtaactagctccata
cctctacaacaacaagttttgcacctgctggcacaactagtacaactcagagtcaactac
tgtctcttagattcagatcagattttcattgggtttgtgatcaagcagtttgagtacatg
gaagaaggccaagtcaaggactatgagaccctgataccacatatctttcatttcctggta
ttactttcatatgagagataccacagtaaggccgtcatagcgatgccaaagatcatccaa
ctctgtgatgggattatggctagtggtcagcaagccactacacatgctgttccagcattg
cgtccactagtccatgatttatttgtgttgaggggttcaagtaaatcagacgctgtcaaa
gagcttgatactcagagagaggtggtcgtatctatgctactgagactcatctattactat
gaggcactagagatgttcattccagtactacatcaagctcaccgtgagagtgaagacaag
tggaagagactgtctagacaagtggtggatatgattctaccattgctagctaggcaacag
atcaaccttgatagccaggaggcattggacacactgcatcatctactagctgctgtagct
ccgagtgctctgagaccagtagatatcttactgaagactatgttccttgtgccatatgat
actgtggacaagatcagcatgcagcgttggctaggtatggtgctatccatactcaatgta
ctcatatcacaatccaaggaagaaaccatactatcacgcctgcaagagttgggtcttact
aatgacctgtttgtgtgccctgtagaagacgagaaggccaggaaggaggacatagtcaat
gcaaatatatcaccacctgaagaagttatggcaaggtttctactgcaggtgatagggttc
actgtgttagcaatacagaaaggcacaggaatagcagttactgagaagactaatcacttc
atacatagtcaactctcacatctactgttgtatgtaacacacatgtttaaatcaggtggt
tttcgtaaggtgtgtacagtcatgtccagcatgatacatagcagtactcagtcttcatgt
tggttcacattacatcaactcaatgcagctttcatggatttggtgtcatttgaccccata
ctagtcctacagtggagccaggtgttactgctactgaattacaatgagcaagagtggtgg
ggtngcatcctgcatacaccaaagcgcnctccattgtccaagtcattgtcgtctgggagt
ctagacaacctagaagataaccaggatatcagcaaaagctgccctagtgatattgtcaaa
aaggcagccttggttgtcttctgtgattttgtgtgtgaaaaccaaacagatgttgagccg
ttaacattcctagttgtgaatcatgtcaatgatatcattcagctatcccatgagcctcca
gtacaagatcttatcagtgcaatccatagaaactcggctgcaagcggtctcttcctccgt
gccgtcaacttgcgcttcagccactaccacgacccatgcatggtgaagcgcactctacaa
tcccttgaaggcatccacctcagccaatcaggtgtcctactcatgctgcttatagaacgg
ttcctgaacacgcaccagcaggcggtgtcgcggttgtgcgattccattgcgtgtcgtagg
gtggagatgatgcttgcagagaggctggaggatacgacaaaccacttgtcattggaggat
ctggagaggctggaaggcaatatgcaaagtcataaactggataaaagacatcctaggtta
tactcactactgagtagattaaaagcagggttaactcgtcatgagcctcacaactcaccg
gcttccaaagatctcaagacagaagacttcactgtcatgccaaacaaggaatggttctta
tctgtggtacaagactgttgtcatggcaacagagcagtatctgctcgtgagtgttcctta
ctggttgctcaactggatcctcaggacataccagcaataatgaaacatgaggaatttagc
tgttcacttctcaaagactctattgttgtaggcctggaaaggaccaaataccaattacaa
atgccttcttccgtagacacatcgcaaattgtgcccgattctcaggaagagcgccctcat
gccattgatagaccacctaaacctcttgtactagaccctctgctacggactgcatgcacc
acgctgctatctagaatacacaatatagtagcggcattaccgccgcagcacagagtggtc
aggactgattcacggagagagactgatcgtgtgtatcgtgctaaactgatggagttcttc
caggatggcggttggtgcaatacgctgtatgatttggcagcggctttagtgaaatatttg
gtgtcggcacggacgctacaacagaatataccagctgataggctggaggatataggacaa
tttgcaatatcatgtttagaggttactaggtggttactagaagagagccttcatggtgtg
tcatctaataggctgcaagtatgcatggagtgtatggcattagtactacagaacaaccag
ttatgtaatctgacaagtcaagccagtcatgtgacatgggtgtgtgcagcggtgagctgt
gtacattacatcacaaatgcagtgtgtgatgagaaaacggataatgctgattcagcaaga
ggggaacttggtagtctgtcaaaagaaccagaagagttccaacaagtctgccgccagacc
gccgagctcattgaactcctacatcttccatctacctcagacagcagtatactctcaaca
atcccacaattccttcagaaaccactcaggaatgtggtagtaggtctggccaggctgcca
ttggtttacggctatgccaggactcctccatttgtgtggaaattgggatggaatccaagt
ttgaggggaaatagtcaggatatgccgccattgccgatggaatatctgaaggaaaaggaa
gtgctgagggagtttatagtcagggcaaatactataggctggacatctaggcagcaattt
gaagagacttgggcaggtctactgggtgtgtttagtagccctgatataccagaagaaatg
gcaatagaggaggacattgagcatagtcaggcagcctgtctagcagtgtgtaccatatca
tcactgcttgtgaacagtttactacatccccaaccaggtaacccaaccaatagcatcatc
aggcatataccaagacatggcaatgaggaaatgccattcctacactcgcctagtggacgc
aaactggtctggttgaggcaggtggtggaaagagaaatgcaagctatgcagtctgttaga
tgtgatgtcactatagtgaatggtatgcctaagtcttcattggaagtagcagatgtgatg
tttggtgcaaacttggaaagagaaccagaatacatgggatttgatctaagccagatttct
gtacatggcatctgggcattacacaacatgctccctccattagttgacagttcagaggga
ggaccggcacctgtggcaacatctccagtacggttgccaggcaacctggatgtccattca
tgtctcatgtttctcctggagttgtacggacagtggttgtcaccgacgccgacgccaaaa
acaccgctcatgctgctctgtgaaacagtgaaatctgttctagtaatatcggatgtgttc
actcagcgtggtcagtttgaatggatgtttgataccttacttgaagtacataagaatcac
cctgtagaagatgaattggtcacacagtatgtcattcctggtatatgcaaagcagctgct
gtattgggcttggatcgagatgtatctgagaagatttccaaactgttagaagtgacacta
cgcagtacccacctaccatccaagattggtgccctgtatgggtcattgtatctattagaa
tcagatgctatagaggatattgatttcattataccggttgtgtcggagtacatcatgaag
aatctgaaaccagtctcacattgtagcagtacagtaagtcagcgccatactctcatcatg
gtggccactgcattctatatcattgaatacttcacagaggacatcaaagccacagaattc
accaaagtgactttgcagaattgtctcatcatgtgcactgtgagtgatgaagctactaac
atgatggtataccacgctatcatgagaggtttagagagattactcatagcaaaggtactc
aatgcagcagacacagaggtgctcactaaactcggtgttgataggttatgtatgccatct
cccgtccacgccttggcagcacttggtctccttctcaccagcatgtataccggggttctc
aaaacgcaccaaccaaccgatgctatcggccaatcagagagcaatcatgagtcacatgat
ccagagaaacttgtcatggcaatggagagagtgtctatcttatttgacaggatacgtaaa
ggctatccatcagaagccagagctgtcgcccaaatcttgccagccttcatcaatgacttc
ttctctcctcaagacatcatcaataaagtgataggagaatttctgtcgaatcaacaacct
catccgcaactcatggcattggtgctattcaaggtatttggcagtttgcaccatcgtggc
caggcatcaggagtcagagactgggtcatgttatcattgtctaattttacccagcgtaca
cctgttgctatggcgatatggagtctgacctgcttcttcatcagcgcatcaacaaatcaa
tggattagagcactccttccccatgtgataagcagaatgggaaaactagaaacactagat
aggaagtacttcctcctcgtagccagggatttcttcagaaaccagattagcgatgacacc
agcaagaggtctttcatctcaacgttccaatcagttgctctagctgcttcagcggatcat
gtgtatgcccaactgctaaaccatatttga
DBGET
integrated database retrieval system
