Amphiura filiformis: 140163014
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Entry
140163014 CDS
T10871
Name
(RefSeq) DNA nucleotidylexotransferase-like
KO
K03513
DNA polymerase mu [EC:
2.7.7.7
]
Organism
afil Amphiura filiformis
Pathway
afil03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
afil00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
140163014
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
afil03400
]
140163014
Enzymes [BR:
afil01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
140163014
DNA repair and recombination proteins [BR:
afil03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
140163014
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B_thumb
DNA_pol_lambd_f
DNA_pol_B_palm
HHH_8
NTP_transf_2
BREX_PglY_6th
DUF6932
Motif
Other DBs
NCBI-GeneID:
140163014
NCBI-ProteinID:
XP_072042452
LinkDB
All DBs
Position
10
Genome browser
AA seq
557 aa
AA seq
DB search
MSAPMGKNRKNRGRNEEPTVVKFQDVNIFIVERKIQRVRFEHLKKLARRKGFRVADSIEL
DEDITHIVAELDHREDVLEAISSKLKASKDGQAIAERRLESAEVVCMDWFTACMEEQKPV
EVKDEHRLKAKPKVVAICPSSEQIRNSGYQDARFACQRRTPLKHHNKLLTDALESLEKHA
EFLGGDQNQSRALAFRKASAALKALPKPVRSMRDVQNLYDLRGGKHCKKVIQELIEDGFS
TEIDNIREDKWFQTMEVFTGVFGCGAATSRKWYDKDLRTLKDVLDAPDVSLTKEQRKGVE
FYDDLNTPVNRIEAEVIRDLVVEETERILPGTTVVITGGFIRGKESGHDVDLLMSHPEDG
KEESLLAKLLKNLHKRELLEYTDIQNSSFTKEVLSRPAQARRSHLDHYERCFSIFRLPKH
LIEQKKHTKKQNGSSDAETSAVKDIDDDSPAPKQMKLEQTNVDNRGVGTSESRSWVARRV
DLIIAPASQYAYALMGWTGSRMFNRSIRDYANKEMNMTLTSHGLYDKVNFKSLPADTEED
IFNHLKLEYREPVDRNC
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcgcccatgggtaaaaatagaaagaaccgcgggagaaatgaagagccgactgtc
gtaaaatttcaggatgtcaacatatttattgttgagcgaaagatacagagagttcgtttt
gagcatctgaagaagttagctcgcaggaaaggcttccgagtcgctgattcgatcgaattg
gatgaagacataacacacatagttgctgaattagaccacagagaggatgtgttggaagca
atatcaagtaaactaaaagcatcaaaggatgggcaagccattgctgagagaagacttgag
tctgctgaagtggtgtgcatggattggttcacagcttgtatggaagaacagaaaccagtt
gaagtgaaggatgaacacagactcaaagctaaacctaaggtagttgctatttgtccatca
tcagaacaaatcaggaatagtggctaccaagatgcaaggtttgcatgtcaaagaagaaca
ccactcaagcatcacaacaaactccttacagatgcattggaaagcttggagaagcatgct
gaattcctaggtggagatcagaaccaatccagggcattagcattccgtaaggcttcagct
gcactcaaagctttacccaaaccagtacggagtatgagagatgtgcagaacctctatgat
ttgagagggggcaaacattgcaagaaagtcattcaggagctgattgaagatgggttttct
acagaaatcgataacattagagaagataaatggtttcagaccatggaggtatttactggg
gtgtttggttgtggtgcagctacttctaggaagtggtatgataaagatttacgcactctg
aaagatgtattggatgcgccagatgtgtctctaacaaaggaacaaagaaaaggagttgaa
ttctatgatgacttgaacaccccagtgaatcgtatcgaggctgaagttatcagggactta
gtggtagaagaaacagaacgaatcttacctggtacaactgtagtcatcacaggagggttc
ataaggggtaaggagagtggccatgatgtagatctactaatgtcgcatccagaagatggt
aaagaagaaagcctattagcaaaattactcaagaacctccacaaaagagaattactggaa
tatactgacatacagaacagctcattcactaaggaagttctatccagaccagcacaggca
agaagaagtcatctagaccactatgaaagatgttttagcatttttagacttccaaaacat
ctgattgaacagaagaaacatactaaaaagcaaaatggcagtagtgatgcagagactagt
gccgtaaaagacattgatgatgactcaccagctccaaaacagatgaaactggaacagact
aatgttgataataggggtgttggaaccagtgagagcagatcatgggtagctagacgtgtg
gatttaatcatagcacctgcaagtcagtatgcctatgcattaatgggatggactggatca
aggatgtttaacagatcaattagagactatgctaacaaagaaatgaatatgacactaacc
agtcatgggctctatgataaagtgaattttaagagtctaccagcagatacagaagaggac
atattcaatcatctaaagctggaatacagagaaccagtagacaggaactgttaa
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