Amphiura filiformis: 140163260
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Entry
140163260 CDS
T10871
Name
(RefSeq) transient receptor potential cation channel subfamily A member 1-like
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
afil Amphiura filiformis
Brite
KEGG Orthology (KO) [BR:
afil00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
afil04040
]
140163260
Ion channels [BR:
afil04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
140163260
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GFIT
Motif
Pfam:
Ank_2
Ank
Ank_3
Ank_4
Ank_5
Ion_trans
ANK_LRRK2
Ank_KRIT1
Motif
Other DBs
NCBI-GeneID:
140163260
NCBI-ProteinID:
XP_072042762
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Position
1:78225607..78289608
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AA seq
1008 aa
AA seq
DB search
MTMVWHQCISLHRVIRLQKIDTLIQKGADVNVKSSVDEATPLHLAARYNCPDAAEVLIHY
GADVTDALTNGQTPLHVCCRRGFLKVVKILVHNGETSYVNSRDKEKTAQLHQDTMAIEGG
IPQDNFLSDKDIEGNTALHLAVGNRHVNVAKYLIERGAPINCRKTSNGFTPLHQAVIIGQ
EPLAQMLIDKGAETEVIDNEQMTPLHRAAMSNTVDSILLLIRQGLCLETKDEDNFTPLLC
AAWKGQTEAGRSLLRYGADITAIDKDMKSCLHWAVEMQHLEFAKMLFEHEHGVEKILNWK
DRVEQTALHYAAEVGNVEMVKLLIENGASIVVKDGEEKAPLHIACQSGHLECVETLLQAS
PIPLNDYDIDDMTPLLLASANGHHSVVKFLIKMGADIASRNNDRRSPLALAARNNELRVL
NALIDNNADVNAMDKDRNTALHLCAQYGHEAPTRLLLNSGADLRLQNVYGKYPLDVAIEN
RHEGVAKAILSCKSWEVAMNNCDATGHSPMRRLIARLPETALLVMNQCVTYSHEDLNHPD
LKITYDYRYIDPGPDDISFDKNKIRYFALETMVEFRRDKLLAHRLSQTSLSKKWKSFARY
FNYFDFLVYLVFVIIVSLHLKLNMAIYNTTDKDEFGCPTYNVTNKTELYDLPYYFDGRHF
YTENENDTVIDNIIRFGDTTFGIQTFILLFIFFRVLVELIRIVRHPIAYFRRLEHYLNWS
MFIPTFFFALPPLCDLQWACGAVAVFVTWMNFIFVLNRFDFFGLYVTMFFTTLKSLLKAM
SVYIFFILGFALAFFICFQSTNPAFKTEWKSIVTTFVMTLGEINKSDILDDIDVDLAPFE
EVANVLMVIFLFVMPMVLINLTIGISVGDIEQILDSSYYKRFSLKTNIILRTEKSFPRWL
QRKVWFPKADYWPNKCKGTLKHKVESILDGSNNRFLRKSREETNRDVTVHDVLMEVRRND
STTAMLSTIIQQQGNLLRRIAKKHDIKVDLEDTAALTTVSHGKGPNKI
NT seq
3027 nt
NT seq
+upstream
nt +downstream
nt
atgacaatggtttggcatcaatgcatatcgctgcacagagtaatcaggttgcaaaaaatt
gatacgcttatacagaagggggcagatgtcaatgttaagtcttctgtggatgaggctaca
ccacttcatttggcagctcgatacaattgtccagatgcggccgaagtactcatccactat
ggtgctgacgtcacagatgcccttaccaatgggcaaacacctctacatgtttgttgtaga
cgtgggtttttgaaagtcgttaagatcttggtacacaacggcgaaacatcctacgttaac
tcgagagataaagagaaaacagcacaactccatcaggatactatggccattgaaggtggt
attcctcaagacaacttcctatctgacaaagacattgaaggaaacacagctctacatctc
gctgttggaaatcgacatgtaaatgtcgcaaaatatctaatagaacgcggggcacctatt
aattgccgaaaaactagcaacggatttacgccgcttcatcaagcggtaattattggtcag
gaaccgttagcgcagatgcttattgataaaggcgcagagacagaagtcattgacaatgaa
caaatgacaccactacacagagcggcgatgtctaatacggtagattctatactgcttctt
ataagacagggactgtgccttgaaacaaaagatgaagacaatttcactcctctattgtgt
gctgcatggaaaggccaaactgaggccggacgatctttgttacgttacggtgcagacatt
accgcaatagacaaagacatgaagtcgtgtttacactgggctgtagaaatgcagcatctg
gaatttgcaaagatgttattcgaacatgaacatggcgttgagaaaattttgaactggaag
gacagagtggaacaaacagctttacattacgctgcagaagttggcaatgtggagatggtc
aagttgctgatagagaatggtgcgtcaatagttgtgaaggatggtgaagaaaaagctcct
cttcatattgcttgtcaatccggtcatttagaatgtgtggaaacgctgctacaggcaagt
ccgattcctctcaacgattacgacattgatgatatgactccattattgctggccagtgca
aatggtcatcatagtgtagtcaaattcctcatcaagatgggtgcagatatagcaagcaga
aataatgaccgtcggtctccattagctcttgctgccagaaacaatgaactacgtgtccta
aatgccctaattgacaacaacgccgatgtaaatgcaatggacaaagatcggaacactgct
ctgcatttatgtgcccaatatggacacgaagcaccaaccaggttattactgaacagtgga
gctgatctccgcctacagaacgtctacggaaagtatccactggatgtagctatagagaac
agacatgaaggagttgccaaagcgatattgtcttgtaaaagttgggaggttgctatgaac
aattgcgatgcaactgggcattctccaatgaggagactgatagcaagacttcctgaaaca
gcacttctagtgatgaatcaatgtgtcacctactcccatgaagacctcaatcatcctgat
cttaagatcacctacgattaccggtatatcgatccaggtccggatgatatctcctttgac
aaaaacaagatacgttattttgcactcgagaccatggtcgagttccgacgggataagctt
ctggcgcaccgtctctctcaaacaagcttatcaaagaagtggaaatcgtttgctcggtac
ttcaactattttgattttctcgtctaccttgtttttgttatcatcgtgagcctgcatctc
aagttaaacatggcaatatacaacacaaccgacaaagatgaattcggctgtccgacttac
aatgttaccaataaaacagagctgtatgacttgccgtattattttgacggtaggcacttt
tatacggaaaatgaaaacgatacagttatagataatattatccgattcggtgacactaca
tttgggattcagacgttcattcttctgtttattttctttcgggtattggttgagttgatc
aggattgtgagacacccaatcgcgtacttcagaagacttgagcactacttaaattggagt
atgttcatcccaacgttcttttttgcattgccacctctatgcgatttgcagtgggcttgt
ggagctgtggctgtattcgttacatggatgaactttatatttgttttgaacagattcgat
ttctttggtctatatgtgacaatgtttttcaccacgctcaaatcgttacttaaggcaatg
tctgtttacattttcttcatcctcggatttgctctagcattcttcatatgttttcaatcc
acaaatccagcttttaaaactgaatggaagtcaatcgtcacaacattcgtcatgacattg
ggtgagatcaacaagagtgatatactggacgacattgatgtagatctagctccatttgaa
gaagtcgccaatgtattgatggttatatttctctttgttatgccaatggtactcatcaat
ttaacgattggcatatcggttggtgatattgaacaaattctagactcatcctactataag
cgtttcagcttaaagactaacatcattcttcgcactgagaaaagttttccacgttggctt
caacggaaggtttggtttcctaaagctgactactggccaaacaagtgcaaagggacactc
aaacataaggttgaatccattctggacggttctaacaacagatttcttcgtaaatcaaga
gaagaaactaacagagacgtaacagttcacgacgtattgatggaagttcgacgtaatgat
tcaacaactgccatgctgtcgaccattatccagcaacaaggcaacctactacgacgaatc
gcaaagaaacatgacatcaaagttgatttagaagatacggcggcactgacaactgtttca
catggaaaaggtccaaataagatttaa
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