Amphiura filiformis: 140163292
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Entry
140163292 CDS
T10871
Name
(RefSeq) transient receptor potential cation channel subfamily A member 1-like
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
afil Amphiura filiformis
Brite
KEGG Orthology (KO) [BR:
afil00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
afil04040
]
140163292
Ion channels [BR:
afil04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
140163292
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_3
Ank_4
Ank_5
Ion_trans
ANK_LRRK2
Ank_KRIT1
PKD_channel
RVT_1
Motif
Other DBs
NCBI-GeneID:
140163292
NCBI-ProteinID:
XP_072042795
LinkDB
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Position
1:78297870..78325922
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AA seq
1176 aa
AA seq
DB search
MANNRIDDAPVEDQYLLEIPTSPKEVKVAKDIPLKDQGINVSAQKKIGPLGRKRLRSGAS
IRGCDTDVVYLDFSKAFDSVNHSKLIEKLRGGKSQPFHPVAALRKGKQLKGSERIKLKRL
GFGLSRRKRHDEKSSEENSSGKSSETSIRSIFSFTRKFLWTGAQSEINRLDKLDDNGLAS
MHIAAQSNQVAKIDTLIQKGADVNVKSSMDEATPLHLVARYNCPDAAEVLLQYGADVTDT
LTNGQIPLHVCCRRGFLKVVKILIHNGETYYVNSRDKERMTPLHQATINGDIDVCKLLIE
NGADIRAKDINQMTPLMHAAQSGFEECVQILLNMGGIPIGDFLSDRDIEGNTALHLAVGN
RHINVARSLMERGAPVNCRKTTNGFTPLHQAVIIGEEPLAQLLIDKGAETEIIDNEQMTP
LHRAAMFNRVDTILLLIRQGLYLETKDEDNFTPLLCAAWKDQTEAGRTLLRYGADITAID
KEMKSCLHWAVEMQHLEFAKMLFEHGHGGKEILNWKDRAEQTALHYAAEVGNVEMVKLLI
ENGASIVVKDGEEKAPLHIACQSGHLECIETLLQACPIPLNDDDIGGMTPLLLASENGHH
TVVNFLIKMGADMASRYDDRRSPLALAARNNELHVMNILIDNNADVNAMDKDRNTALHLC
AQFGHEAPTRLLLNSGADLRLQNVYGKYPLDVAIENKHEGVAKAILSCRSWEVAMNNCDA
TGHSPMRRLIARLPEAALLVMDQCVTHSHEDTNHPDLKITYDYRYIDPGPDDISFDKNKM
RYFALETMVEFRREKLLAHRLSQTSLSKKWKSFARYFNYFDFLVYLVFVVIVSLYLKLNM
GIYNITGKDEFGCPTISNVTELYDLPYNSIVYYWPNENDTVYHVMLYDTTSIGIRAFILL
FIFFRALVELISIVRHPIAYFRRPEHYLNWSMFIPTFLFVLPSESGPCAWHWAWGTVAVF
VTWMNFIFVLNRFDFFGLYVTMFFTTLKSLLKAMSVYIFFILGFALAFFICFQSTNPAFK
TEWKSIVTTFVMTLGEINKSDILDDTDIDLGPFEEVANVLMVIFLFVMPMVLINLTIGIS
VGDIEQILDSSYYKRFSLQTNIILRTEKGFPRWLQRKVWFPKADYWPNKCKGTLRHKAEA
ILGGSNIRFLRKSREETSRDVTVQDVLMEVRRNEST
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atggctaacaacagaatagatgatgcaccagtggaagaccagtaccttctcgaaattccg
acatctccaaaagaagtaaaggttgcaaaagacattccacttaaagatcagggtatcaat
gtgtcagctcaaaaaaagatcggacctcttggtagaaaaagactaagaagcggagcaagc
ataagggggtgtgacactgatgttgtgtacctggacttctcaaaggcatttgactcagtc
aaccattccaagcttattgagaagctcaggggagggaaatcccagccatttcacccagtt
gcagcactacgtaaaggcaaacaactaaaaggttccgaacgaatcaagttgaaacgtctc
ggatttggattatcgcgaagaaaacgtcatgatgagaaaagtagcgaggagaacagtagt
ggcaaatcgtctgagacttcaatcagatccatattcagctttacccggaagtttttgtgg
acaggagctcagtcagaaattaaccgtttggacaagttagatgacaatggtttggcatca
atgcatatcgctgcacagagtaatcaggttgccaaaattgatacgcttatacagaagggg
gcagatgttaatgttaagtcttctatggatgaggcaacaccgcttcatttggtagctcga
tacaattgtccagatgctgccgaagtactcctccagtatggcgctgacgtcacagatacc
cttaccaatggacaaattcctctacatgtgtgttgtagacgtgggtttttgaaagtcgtt
aagatcttgatacacaacggcgaaacatactacgttaactcgagagataaagagagaatg
acaccacttcatcaagctactatcaatggtgatattgacgtctgtaagttgttgattgaa
aatggcgctgatattcgagccaaagatatcaaccaaatgacaccgttaatgcatgcggct
cagagtggattcgaagagtgtgtgcaaattctcttaaatatgggtggcattcctataggc
gatttcctatctgacagagatattgaaggaaacacagctctacatctcgctgttggaaat
cgacatataaatgtcgcaagatccttaatggagcgcggggcacctgttaattgccgaaaa
actaccaacggatttacgccgcttcatcaagcggtaatcattggcgaggaaccgttggcg
cagttgcttattgataaaggcgcagagacagaaatcatcgacaatgaacaaatgacacca
cttcacagagcggcaatgttcaatagagtagatacaatactacttctcataagacaggga
ctgtaccttgaaacaaaagacgaagacaatttcactcctctattgtgtgccgcatggaaa
gaccaaactgaggccggacgaactttgttacgctacggtgcagacattaccgcaatagac
aaagaaatgaagtcatgcttacactgggctgtagaaatgcagcatctggaatttgctaag
atgttatttgaacatggtcatggcggtaaggaaattttgaactggaaagacagagcggag
caaacggctttacattacgcagcagaagttggcaatgtggagatggtcaagttgctgata
gagaatggtgcgtccatagttgtgaaggatggtgaagaaaaagctccacttcatattgct
tgtcaatccggtcacttggaatgcatagaaacgctgctacaggcatgtccgattcctctc
aatgatgacgacattggtggtatgacgccattgttgctggcgagtgaaaatggtcatcat
acagttgtcaatttcctcatcaagatgggtgcagacatggcgagcagatatgatgaccgg
cggtctcctttagctcttgctgccagaaacaacgaactacatgtcatgaatatcctaatt
gataataacgccgatgtaaatgcaatggacaaagatcggaacactgctttgcatctatgt
gcacaattcggacacgaagcaccaaccaggttattactgaacagtggagctgatctccgc
ctacagaacgtttatggaaagtatccactggatgtagcaatagagaacaaacatgaagga
gttgccaaagcgatattgtcttgcagaagttgggaggttgctatgaataattgcgatgcg
actggacattctccaatgaggagactaatagcgagacttcctgaagcagcacttctagtg
atggatcagtgtgtcacccattcccatgaagacaccaatcatcctgatcttaagataacc
tacgattatcggtatatcgatccaggtccagatgatatttcttttgacaaaaacaagatg
cgttattttgcactcgagaccatggtcgagttccgacgtgaaaagcttctggcgcaccgt
ctctctcaaacaagcttgtcaaagaagtggaaatcgtttgctcggtacttcaactatttt
gattttctcgtctaccttgtttttgttgtcatcgtgagcctatatctcaagctaaacatg
ggaatatacaacataaccggcaaagatgagttcggctgtccgactatctccaatgtgaca
gaactgtacgacttgccgtacaacagcatagtgtattattggccaaatgaaaacgatacc
gtttaccatgttatgctatacgataccacttcaattgggattcgggcattcattcttctg
tttattttctttcgggcattggttgagttgatcagcatcgtgagacacccaatagcgtac
ttcagaagacctgagcactacttgaattggagtatgtttattccaaccttcttgtttgta
ttgccatctgaatctggaccatgcgcttggcactgggcttggggcactgtggctgtgttc
gttacatggatgaactttatatttgttttgaacagattcgatttctttggtctatatgtg
acgatgtttttcaccacactcaaatccttacttaaggcaatgtctgtttacatcttcttc
atcctcggatttgctctggcattcttcatatgttttcaatccacaaatccagcttttaaa
actgaatggaagtcaatcgtcacaacattcgtcatgacactgggtgagatcaataaaagt
gatatactggacgacactgatatagatctaggcccatttgaagaagtcgccaatgtattg
atggttatatttctctttgttatgccaatggtactcatcaatttaacgattggcatatcg
gttggtgatatcgaacaaattctagactcatcctactataagcgtttcagcttacagact
aacatcattcttcgcacagagaaaggttttccacgttggcttcaacggaaggtttggttt
ccaaaagctgactactggccaaacaagtgcaaagggacactcagacataaggctgaagcc
attctgggcggttctaacatcagatttcttcgtaaatcaagagaagagaccagcagagac
gtaacagttcaagacgtattgatggaagttcgacgtaacgaatcaacgtaa
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