Amphiura filiformis: 140163689
Help
Entry
140163689 CDS
T10871
Name
(RefSeq) probable ATP-dependent RNA helicase DDX5
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
afil Amphiura filiformis
Pathway
afil03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
afil00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
140163689
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
afil03041
]
140163689
03009 Ribosome biogenesis [BR:
afil03009
]
140163689
Enzymes [BR:
afil01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
140163689
Spliceosome [BR:
afil03041
]
Complex A
U1 snRNP components
U1 related factors
140163689
Complex B
140163689
Ribosome biogenesis [BR:
afil03009
]
Eukaryotic type
Pre-60S particles
Helicases
140163689
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
ResIII
Helicase_C
Motif
Other DBs
NCBI-GeneID:
140163689
NCBI-ProteinID:
XP_072043106
LinkDB
All DBs
Position
11:41681371..41682174
Genome browser
AA seq
405 aa
AA seq
DB search
MSRYERDRPYDSSGRSDRRGGGFGRGGGGGRGGGSFGGGGPPRFGGRGGGGRGGGRGGGG
GGGSMNGGIREKYGQPGERLRKPNWDAARLAPFEKNFYKEHPDVTRRPQEEINNYCRSKE
ITVRGKDPPKPVFRFEEASFPDYVLGEVQKQGFTEPTAIQAQGWPVALSGKDLVGIAQTG
SGKTISFMLPAIVHINHQPFLERGDGPICLVLAPTRELAQQVQQVAYQFGSSSRLKSTCV
YGGAPKGPQLRDLERGCEIVIATPGRLIDYLESGKTNLSRCTYCVLDEADRMLDMGFEPQ
IRKIMDQIRPDRQVLMWSATWPKEVRSLAEDFLRDYVMINIGSLTLSANHNILQIIDVCM
DEEKDTKLIRLLEEIMREKENKALVFVETKRRTDELVTQNAEMGM
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgtccagatacgagagagataggccctatgattcttcaggacgctcggataggagaggc
ggcgggtttggccgtggtggtggtggaggacgaggtggaggaagcttcggtggaggaggc
cctccaaggtttggcggccgaggtggtggcggtagaggtggtggtagaggtggtggaggc
ggaggtggttctatgaatggtggcattagagaaaaatacggtcaaccaggagagcgacta
cgcaaacctaactgggatgcggccagactagcaccatttgagaagaatttttacaaagaa
cacccagatgtgacaagaagaccacaggaggaaatcaacaattactgtaggagtaaagaa
atcacagttagaggcaaagatccacctaaaccagtgtttaggtttgaagaagcaagtttc
ccagattatgtattaggagaagtacagaagcagggcttcacagaaccaacagccatccaa
gcacaaggctggccagtagcactaagtggtaaagatctagtcggtatagcacaaacaggg
tcaggaaagacaatatcgtttatgttacctgccatagttcacatcaaccaccaaccattc
ctagaaagaggcgatggcccaatttgtttggtcttggcaccaacaagagagttggctcaa
caagtgcaacaagtagcttaccaatttggatcatcgtcacgactcaagagcacatgtgtc
tatggtggagcaccaaaaggaccacaactcagggatcttgaaaggggttgcgagatagtc
atagccaccccaggtcgtcttatagattaccttgaatctggcaagaccaacctaagccgt
tgcacatattgtgtactagatgaggccgatagaatgttggacatgggttttgaaccacaa
attaggaagattatggaccaaatcaggcctgataggcaagtacttatgtggagtgcaacc
tggcccaaggaagtgaggagtctagcagaagatttcctgagggactatgtaatgatcaat
ataggatctctgacattgtcggctaaccacaacatattgcagatcatcgatgtgtgcatg
gatgaagagaaggacacaaagttgatccgtctgttggaggaaatcatgcgggaaaaggag
aacaaggcgctagtgtttgtagagactaagcggagaacagatgaattggttacgcagaat
gcagagatgggtatgtag
DBGET
integrated database retrieval system
