Amphiura filiformis: 140164359
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Entry
140164359 CDS
T10871
Name
(RefSeq) VPS35 endosomal protein-sorting factor-like isoform X1
KO
K25731
VPS35 endosomal protein-sorting factor-like
Organism
afil Amphiura filiformis
Brite
KEGG Orthology (KO) [BR:
afil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
afil04131
]
140164359
Membrane trafficking [BR:
afil04131
]
Protein recycling
Others
Retriever complex
140164359
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Vps35
UBC_like
Motif
Other DBs
NCBI-GeneID:
140164359
NCBI-ProteinID:
XP_072043734
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Position
11:11951034..11991391
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AA seq
990 aa
AA seq
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MASYEWCSRLHNYETERKELQLTSEVALEHPLKPITVQEAKIKKVGRSSSRDSVDSAKTS
STQKAVDPGALDGSDPLSQFAAQAAVTPKLDPLSAAADPLSGGAGIPRKDSTDGAQALEA
TVIMDDSFEPWSSKKASILSKYTTSEKLSITTSFLSSADREKVNVKSQVAQGTVTDKVKN
RLEQLDDFEEGSVKEMLNLSQQEYVHRIEELNQALVSSWDQDQKVKALKIAIQCSKLLAD
ISVIQFYPSKFVLVTDILDTFGNLVYDRIRRKSTYLPPGSMTPQMLPVNFSPDQVPDSAK
ETCRNWFFKIASIRELIPRLYVEAAILKCYSFLNPGEYSQALLRLTSQMRGIGDPLVGLY
ARAYLCRVGMSVAPEARTHLISNFYDFLSSYKQLQGDTVQNILAMQRVDMTSYLNLFSPA
LDWILQCIAHQAPEETLTEILGKCKKQCNTALLLNSVMSAFKPEYIASRAMGFTELIKEC
EEAGFPKHNLYRSLGLNLMMEDPPQAQRLSVLNEVWKAVMKFKNPADYIECAEVWIEYPC
RHFTKKEVNTIIGDIIKHMTPDRAFEDYYPQLQSVMSKILSHMSDFSVLLSMDKFLPMVD
MFQKDTVKVEVCKGIMEAFVRNQTEATNDPVILNALMFICKTMHDSINALSLEDEKRDIG
NLIGGFIRKISFGRDFEQQLSFYVESRANFSNLDAVLVTLVQCVNQLAGETRSVVKGNHS
RKTSSFVRACAAYCFITIPSIVDIFHRLNLYLASGQVALMNTALTQADAFFKAAISLIPD
VPRMLKIDHKVRSTEPLLHAYINNFLSTLLVVPDNPDQGVLYLIRGLVNVIEDYTWENNT
DAKAKVYISVICLLSAAAQDQYLYHIDQVDSNDTMYGTDKKFINEINTMCSTLIEQVLDH
CKTLSQDDSQKKRQSALALEFFNRLVIHADLSNQSMFGLAQNLWNLSQKHGQGETKLMIR
CLEHVKNKGTLPGGRAYGDLAAKMALQTRT
NT seq
2973 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcttacgagtggtgctcaaggcttcataactatgaaacagaaagaaaagaactg
cagctgacttcagaagtagcactggaacatcctcttaaacccatcactgtacaagaagca
aagatcaagaaggttggtcgctccagcagtcgggactctgtagactctgccaagacttcc
tccactcaaaaggctgtagatcctggtgctctagatgggtcggatccattatctcagttt
gcagcccaagctgccgtgacacccaagttggatccgctgagtgctgcggctgatccattg
tctggtggtgctggcattcctcgcaaggacagtactgatggagctcaagcattagaagct
actgtaatcatggatgattcatttgaaccctggtccagtaagaaagctagtattctgagc
aagtacaccacatcagagaagctgtctattacaacaagttttctttcatctgctgataga
gaaaaagtcaatgtcaagagtcaggtggctcaaggaactgtcactgacaaagttaaaaac
aggctggaacaactggatgactttgaggagggctcagtgaaggagatgttgaacttgagt
cagcaggagtatgtccatcgcatagaagagctcaatcaagcccttgtatcttcatgggat
caggaccagaaagtcaaggccttgaaaattgctatacagtgttccaagctactggcagac
atatctgtgattcagttctatcccagcaaatttgttcttgtaactgatatcttggatacg
tttggaaaccttgtctatgatcgcatacgtcgcaagtcaacctaccttccaccgggcagc
atgacaccccagatgttgccggtaaacttctcaccggaccaggtgcccgactcggccaag
gaaacctgcaggaattggttcttcaagatcgcttccatcagagagctcattcctagacta
tatgtggaggcagccattttgaaatgttatagctttttgaacccaggggagtattctcag
gcattactaaggctaaccagtcaaatgagaggtattggtgatccactggtgggtctgtat
gctagagcctacttatgtagggttggtatgtcagttgctcctgaagctagaacccatctc
ataagtaacttctatgacttcctgtcttcttacaaacagctccaaggtgatacagttcag
aatatattagccatgcagagggtagacatgaccagttatctcaacttattttcaccagcg
ttagattggatcttacaatgcatagctcaccaagcaccagaagaaacactcactgaaata
ctaggaaaatgcaagaagcagtgtaatactgccttgctgttgaattcagtaatgtcagca
ttcaaaccagagtacattgccagtcgtgccatgggatttacagagctgattaaagaatgt
gaggaagctggattcccaaagcacaacctgtatagatcattgggattgaatctgatgatg
gaagaccctccacaggctcagagactctcagtcctcaatgaagtttggaaagctgtgatg
aagtttaaaaatcctgcggattatatcgaatgtgctgaggtatggatagagtatccatgc
agacattttacgaaaaaggaagtgaacaccatcataggagatatcatcaagcacatgaca
ccagacagagcctttgaagattactacccacagctccaatctgtgatgtccaaaatttta
tctcacatgagtgacttctcagtactcctgtcaatggacaagttcttaccaatggttgac
atgtttcagaaagacacagtgaaagttgaagtttgtaaaggtataatggaggcttttgtt
agaaaccagacagaagcaactaatgatccagtgatattaaatgcattgatgttcatctgc
aagacaatgcatgactccatcaacgctctttctctagaagatgaaaagagagacataggc
aatctgattggaggttttataagaaagatatcctttggacgtgattttgagcagcagcta
agtttttatgtggaatcaagagctaacttcagcaacctggatgctgtccttgtcacactt
gtacagtgtgtgaatcaattagctggtgaaacaagatctgtagtgaaaggaaaccattct
agaaaaacatcttcatttgtcagggcctgtgctgcttattgttttatcactattccatca
atagtagacatcttccatcgactcaatctgtaccttgcatctggacaggtagcactaatg
aacacagcactaacacaagctgatgcattcttcaaggctgctatcagtctcatcccagat
gtaccaaggatgctgaagattgatcacaaggtgcgatctactgagcccctactccatgca
tacatcaacaacttcctatcaactctactggtcgtgcctgacaacccagaccaaggggtc
ttataccttattcgaggattagtcaatgtcatagaggactatacatgggagaacaacact
gatgccaaagcaaaagtatacatcagtgtgatatgtctactgtcagcagcagcccaggat
caatacttataccatattgatcaagttgactccaacgatactatgtatgggactgacaag
aagttcatcaatgagatcaataccatgtgcagtactttgatagagcaggttctagaccat
tgtaaaaccttgtctcaggatgactctcagaagaagagacaatcagccttagcattagaa
ttcttcaacagacttgtaattcacgctgatctgagtaaccagtctatgtttggtttggct
cagaacctgtggaatctatcacagaaacatgggcaaggagaaactaaactaatgattcgg
tgtttggagcatgtgaagaacaaaggcactctaccaggcggtagagcctatggtgactta
gcagctaaaatggcactacagacgaggacatga
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