Amphiura filiformis: 140164423
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Entry
140164423 CDS
T10871
Name
(RefSeq) LOW QUALITY PROTEIN: transcription elongation factor SPT6-like
KO
K11292
transcription elongation factor SPT6
Organism
afil Amphiura filiformis
Brite
KEGG Orthology (KO) [BR:
afil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
afil03021
]
140164423
03036 Chromosome and associated proteins [BR:
afil03036
]
140164423
Transcription machinery [BR:
afil03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
140164423
Chromosome and associated proteins [BR:
afil03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
140164423
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
SPT6_acidic
HHH_9
S1
Spt6_S1
HHH_3
Tex_YqgF
SH2
Tex_N
MJ1567
S1_RRP5
Motif
Other DBs
NCBI-GeneID:
140164423
NCBI-ProteinID:
XP_072043804
LinkDB
All DBs
Position
11
Genome browser
AA seq
1975 aa
AA seq
DB search
MSDFFESEAEVSEDEEGGKPASSDEEEEEAEDNQDNVADLINDEEEEDGEKSEDDYDSDE
DAVRGKKRSHSYDDDADDRLDDDDLDLIEENLGVRVERKKFRRLRRIEDDDSDDEDNAGP
SAEVEDDRDAIAADLFKPGDDEGEETAEEDEGDHRRHHHHRDQEESQQVDDQFAEIESGE
EESDPDDFIVDDDGQPIARKKKKGHKPRYTDSALQEAQDIFGLDFEFEEFDKYEDQYEDE
EAEEEEYDEYEDEEEDTEEGEQRRKSKRPGRGRKKTSKKSIYEVFEPSELERGHFTDFDN
EVRTADVPERFMLRRVPVTEADNAELEEEADWIYHQAFLTPTISNQEFSDQGDGGYGAAL
YERKPPRTKNKIREALHFMRNQHFEVPFIAFYRKEYVEPELNFNDLYKVYHWDEKWCQLK
NRKENLKKLFEKMQAYQFDQINTDTDEPLPESLRTLTEADLDRLNDVDTMEKLKDVYLHF
LLYYGRDLPKMHNMPKQKPKKIKIVINKKKVMKTIRKTILVKRKKQKKEEDKPEEEKQEE
EKEKEDDEEKKDEEKNDDEKMDEGEKEDDGEKVDKENEDGEKKEEEEDGEKKDEEKNPEE
KMEEGEVEEKEKEDGEIMDEDKDKEDGEIKEKDDEDKEKNDDGKEEGEMEDSEEEVEEEI
EEEVETEEEEELEITDDEEEEGTSHEIKQATRKSLYTICQEAGLDGLAKKFGLTPEQFAE
NLRDNYGRYDPEQYPDEPLEAAKEYISRKFNTPEAVLRAARYMVAXQLAHEPLVRQCVRQ
TFXERAKICVKPTKKGIKEIDEAHPCFGSKYLKNKQVKDLLGDQFLRLLQAESDRLIKVT
ISLDMEEDSSSSFQSTSYFEEIKQLYYRDEFSSNVQAWNKERSAAIEIALNSVLYKEFTK
EIKSKLTQEAKDGISKLCCRKLFEWLKVMPYQADQQMEDDDDDEYLDGGGPVGLRVMGVA
VPSDMELATFCALLDGDGEVSDFLRLPHFLRRRTAHWQRDRELKEADVEAIKNFITNKKP
HVIVVASETRMTLRVIEDIKQCIQDLEQEQQMAPINVQLMDSNCAVIYQNSKQAETEYRE
YPPLLRQAISIARRLQEPLVELSRMCNADDDLMNLQFHPMQDVVNKDDLRDALYQEFIYR
VNEVGVDLNRSITHAHTSSLVQFVCGLGPRKGNAMIRTLKQQNQRLENRNHLVTVCELGP
KVFINCAGFIKIDTASVTDTTDSYIEVLDSTRIHPETYEWAQKMAVDALEYDESAEDANP
AEALEEILENPDKLKDLDLDAFAEELERQGYGNKSITLYDIRAELNSRYKDLRTPYHPPT
AEEVFSMLTKETPETFYKGKMCLARVNSIARRRPPKDELDNANPVRNDKTGLWQCPFCQQ
DDFPELSEVWSHFDAGSCPGQAIGVNVNLENNIQGFIHTRNISDKKVINPEDRVQLGMTL
HCRITKIDIEKFRVDLTCKSSDLQDKNGEWAPPKDTYYDHDSAEKDQKKGEAEKKAHQST
YVKRVIVHPSFHNVTYKQAEKMIADLEQGEVIIRPSSKGTDHLTVTWKVDEGIFSHIDVR
EDGKENVFSLGKSLIIGNEEFEDLDEIVARYVQPMAAYVRDVMTHKYYRNSEGGKREILD
KLLSGEKKKAPSRIPYFMSFTKEYPGKILLSYQPRSKPRHEYVTITPEGYRYRQQVHSSI
NGLLRWFKEHFRDPIPGLTPTIASHHRTPMGAAPESTPMPYYAGTPMMLKSGLATPRQTP
SATPQLPGRYGALIGAAAAGYSGMHAGYATPQTNPMATPLAHATPQYQPNMTPSQNPMRT
PQYQPTPRANWGGTTPQTTQVVRAIQRHVQGASQQQAQQQQQSSSRAAVDWAQQAAQWAK
QRQQTHPGRSPGQHSGMTPRTGGMTPRAGGMTPRAGGHTPHGGHTPHGGHTPHGGHTPHG
GHTPRSGSMTPRASGTPRSSGAPRYTPRMHEPSPMSISPPAHSQQGDATPLFDET
NT seq
5928 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacttctttgagagtgaagccgaggtgtctgaggatgaagaaggaggaaagcca
gccagcagtgatgaggaggaggaagaagcagaggataaccaagataatgtggcggatctg
atcaatgatgaagaggaggaggatggggagaaatctgaggatgactatgattctgatgaa
gatgccgttagagggaagaagcgttcccattcatatgatgatgatgcggatgatagattg
gatgatgatgacctggatctgattgaagagaatctcggtgttcgtgtggaaaggaaaaag
ttccgtcgtttgagacgaattgaggatgatgacagtgatgatgaggataatgcaggccca
tcagcagaggttgaagatgatcgcgatgccatcgccgcggatctcttcaaacccggcgat
gacgagggagaagaaacggcagaggaagacgaaggcgatcatcgtcgtcaccaccaccac
agagaccaagaagaatcgcagcaagtggatgatcagtttgcagagattgaatctggagag
gaagaatcagatcccgatgacttcattgtcgatgatgatggtcaaccaatagctagaaaa
aagaagaaaggacacaaaccgagatacacagactcagcactccaggaggctcaggatatt
tttggtcttgattttgagtttgaggaatttgacaaatacgaagaccaatatgaagatgaa
gaagccgaggaagaagagtacgatgagtatgaagatgaagaggaggacacggaggaaggc
gaacaaaggaggaagagcaagaggccagggcgagggcgtaagaagacatcaaagaagagc
atctatgaggtgtttgaacccagtgagctggagagaggtcacttcactgatttcgacaat
gaagtaagaacagcagatgtgccagaaaggttcatgttacgtcgtgtgccagtcacagaa
gctgacaatgctgaattagaagaagaagcagattggatctatcaccaagcattcctgacg
cctaccatctccaatcaggagttctcagatcaaggagatggtggatatggtgctgctcta
tacgagaggaaaccaccacgcaccaagaacaagattagggaagccctacattttatgcgt
aaccaacattttgaggtgccgttcattgccttttataggaaagaatatgttgaacctgag
ctgaatttcaatgatttgtataaagtctaccattgggatgaaaagtggtgccaactgaaa
aatcgcaaagagaatttgaagaagttatttgagaagatgcaagcgtaccagtttgaccag
atcaacacggataccgatgagcctctaccagaaagcttaagaactctcactgaagctgac
ttggacaggttgaatgatgttgacacgatggagaaactgaaagatgtctacctccacttc
cttctgtactatggccgagacctgcccaagatgcacaacatgcccaaacaaaaacctaaa
aaaataaagatcgtaatcaacaagaaaaaggtcatgaaaactatcagaaagaccatcttg
gtgaagagaaagaagcagaagaaggaagaggacaaaccagaggaagaaaagcaagaggaa
gaaaaggaaaaggaagatgatgaagagaagaaagatgaggagaagaatgacgatgagaag
atggatgaaggggagaaagaggatgatggtgaaaaagtagacaaagaaaatgaagatgga
gagaaaaaggaggaagaagaagatggggaaaagaaagatgaagaaaaaaatcccgaagag
aagatggaggaaggggaggtagaagaaaaggaaaaggaagatggtgaaatcatggatgaa
gacaaggacaaagaagatggggaaatcaaagagaaagacgatgaagacaaagagaaaaat
gacgacggcaaggaggaaggagagatggaggactcggaggaggaagtggaagaagaaatc
gaagaggaagtggaaaccgaggaggaggaagaattggagattacggacgatgaagaggaa
gaagggaccagtcatgagatcaagcaggcaacgagaaagtcactctataccatctgccag
gaagcagggttagatggtttagccaagaagtttggtttgacaccagagcagtttgctgag
aatctgcgtgacaactatgggcgttatgatccagaacagtacccggatgagcctctagag
gcagccaaggaatacatatctagaaaattcaacacacctgaggcagtactgagggcagcg
cggtatatggtggcgnttcaactagctcacgaacctcttgttagacagtgtgtgaggcag
acattcntcgagagagccaagatatgtgtgaaaccaaccaagaaaggaattaaggaaatt
gatgaagctcacccgtgctttggcagcaaatacctgaagaataaacaagtgaaagatcta
cttggagatcagttcctgagattactgcaagctgagagtgatcggctcatcaaggtgaca
atcagcctggatatggaggaagatagcagctccagttttcagagcacaagttactttgag
gaaatcaagcaactgtactatcgtgatgagttcagtagtaatgtgcaagcatggaacaaa
gagagatcagcagctatagagattgcactgaatagtgtgctctataaggagtttaccaag
gagatcaagtcaaagctgacacaagaagccaaagatggtattagcaagttatgctgcagg
aaactgtttgagtggttgaaggtgatgccataccaggctgatcagcagatggaggatgat
gacgatgatgaatacctggatggaggcgggcctgttggcctcagggtcatgggagtagcg
gttccttctgatatggaattggccacattctgtgctctccttgatggagatggagaggtg
tctgatttcctgcgtcttcctcacttcttgagacgacgcaccgcccactggcaaagagat
agagagctgaaggaagcagacgttgaagcaatcaagaatttcatcactaataagaagcct
catgtcatagtagtagcatcagagaccagaatgacgttgagagttatcgaagacatcaaa
caatgcattcaagacttagaacaagagcaacagatggcgccaatcaacgtgcagctgatg
gacagcaactgtgctgtcatttaccagaattcaaaacaagctgagactgaataccgtgag
tatccacccctgttgagacaagccatctccatagcgcgtcgtcttcaggaaccgctggta
gaactttctagaatgtgcaatgccgatgatgacttgatgaatttgcagtttcatcccatg
caggatgtagtgaacaaagatgatcttcgtgatgcattgtatcaggaattcatctacaga
gtgaatgaggtgggagtcgatctcaaccgctccataactcacgctcatacatccagcttg
gtacagtttgtatgtggtttgggaccacgcaaaggaaatgcaatgataaggactttgaag
cagcagaatcagcgtcttgagaatcgcaaccatcttgtgactgtgtgtgagttgggacca
aaggtcttcattaactgtgctggttttatcaagattgacactgcctcagtcactgacact
acggactcgtacattgaagtactagacagtacccgtatccatccagaaacctatgagtgg
gctcagaagatggccgtggatgccttggaatatgatgaatctgcagaagatgctaatcca
gctgaagctttggaagaaatcttggagaatcctgacaaactcaaagatcttgatttggat
gcttttgctgaagaacttgaaagacagggctatggtaataaaagcatcacattgtatgac
atccgtgccgaattaaacagccgctacaaggatctgcgtacaccatatcatccaccaacg
gccgaggaagtcttcagtatgctgaccaaagaaactccggaaacattctacaaaggcaaa
atgtgtttggccagagtaaatagcatagctagacgtcggccacccaaggatgagttagac
aatgccaatccagtgaggaatgacaagacagggttatggcaatgtccgttctgtcaacaa
gatgacttccctgaacttagtgaagtgtggagtcattttgatgctggtagttgtccaggt
caagctattggtgtcaatgtcaacctagagaataacattcagggttttattcacaccagg
aacatcagtgataagaaggtcatcaacccggaggatagagtgcagcttggaatgactttg
cattgccgtatcaccaagattgacatagagaaattccgagttgacctgacatgcaagagc
tcagatctacaggataagaatggtgaatgggcgccacccaaagacacctactatgaccat
gactcagcagagaaggatcagaagaagggagaagctgagaagaaagctcaccagtcaaca
tatgtgaagcgtgtaattgttcacccatcattccataatgtgacctacaaacaagctgag
aagatgattgctgatttggaacaaggtgaagtcatcatcagaccaagcagcaagggcaca
gatcatttgacggttacatggaaggttgacgagggaattttctctcatattgatgtcagg
gaagatggcaaggaaaacgtcttcagtcttggcaaatcccttattattggcaatgaggaa
tttgaagatttagatgaaattgtggcacgctatgtccagcctatggcggcgtacgtccgt
gacgtcatgacccacaagtactaccgtaacagcgagggcggcaaacgtgaaatcctggac
aagttgctatcaggggaaaagaagaaagcgccctcccgtatcccgtacttcatgagtttt
accaaggagtaccctggcaagatattgctgtcgtatcagccgaggagtaaaccgcgacat
gagtatgtgacaataacgccagaggggtacagatacagacagcaggtgcacagctctatc
aatgggctgcttaggtggttcaaggagcacttcagggaccctattccaggtcttacccct
acaatagcctctcatcacaggacaccaatgggagccgcgccagagagtacacctatgcca
tattatgcaggtacaccgatgatgctcaaaagtggtcttgccactcctagacaaaccccc
agtgctacaccacagctccctggaagatacggtgccctcattggtgctgctgctgcaggc
tattcgggcatgcatgctgggtatgcaactccgcagaccaatccaatggcgacaccgtta
gcacatgcaacacctcagtaccagccaaacatgaccccatcacaaaatccaatgaggaca
ccgcagtatcagccaacaccaagggctaattggggtggcacgacaccccagacgacacag
gtggtgagggcgatacagagacatgtccagggggctagtcagcaacaggcacagcaacaa
cagcaatcatcatcaagagcagctgtggactgggcacaacaggcagctcaatgggccaaa
caacgacaacaaacacatccagggagaagtcctggccagcacagcggcatgacgcctcgt
actggcggcatgacaccacgcgccggtggtatgacgccacgtgccggcggccacacacca
cacggtggccacacaccacacggtggccacacaccacacggtggccacacaccacatggt
ggccacacaccccgttcgggctctatgacaccgcgagcatcgggtacccctcgtagttct
ggagctccgcgctacacaccccgcatgcatgaaccaagtccgatgtctatttcaccaccg
gctcatagccaacaaggcgatgcaacaccattgtttgacgaaacatga
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