Amphiura filiformis: 140164509
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Entry
140164509 CDS
T10871
Name
(RefSeq) DNA repair protein RAD51 homolog 3-like
KO
K10870
RAD51-like protein 2
Organism
afil Amphiura filiformis
Pathway
afil03440
Homologous recombination
afil03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
afil00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
140164509
03460 Fanconi anemia pathway
140164509
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
afil03400
]
140164509
DNA repair and recombination proteins [BR:
afil03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecA family proteins
140164509
FA (Fanconi anemia) pathway
Other FA pathway factors
140164509
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rad51
AAA_25
ATPase
RecA
DnaB_C
HHH_5
AAA_24
nSTAND3
TrwB_AAD_bind
IMS_HHH_1
HTH_10
Motif
Other DBs
NCBI-GeneID:
140164509
NCBI-ProteinID:
XP_072043905
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Position
11:complement(19727798..19747934)
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AA seq
395 aa
AA seq
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MQRDIGSFPFSPTVRVKLKNAGFSTVEDLTGLKPSELSKEVGISKEAALEVLQLVKGELD
PVHSHQSSMPTTSKSTTTSQRLAPSQQSKTGSTLTALDMLRQEKSHQPIVTFCQDLDEML
GGGVQLGKITELCGAPGVGKTQICMQLCVDVQIPQCFGGVGGEAVYIDTEGSFIAHRVAD
MAKAAVQHCTCISASSQSTEEQEALSTFTVNHILSGIHVFRCHNYTELIALVNLLPDFVT
EKNKVHLIVIDSIAFHFRHDFDDMSLRTRLLNGLAQNLIRIATHQNLAVVLTNQMTTKVG
GHNGHSHLVPALGESWGHASTIRLILFWRNSQRYATLYKSPSKQEMTVPYDITLSGVRTV
TQISSKSNISTSDHASEDGDTNPRKRLRVGDDESR
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgagatattgggagtttccccttttctccaacagtgcgggtgaagttgaagaat
gctgggtttagcacagttgaggatttgacaggtctaaagccatcagaacttagcaaagaa
gttggaatttccaaagaagcagccttagaagtgttacaacttgtgaaaggagaattggac
ccagtccatagccaccaatccagcatgcctactacatctaagtctaccactaccagccaa
agactggctcccagtcagcaatcaaagacagggagtacattgactgcactggatatgtta
agacaggagaaatctcatcaaccaattgtgacattttgtcaagacttggatgagatgttg
ggaggtggggtacaacttgggaaaatcacagaactttgtggggcaccaggagttggcaaa
acacaaatttgcatgcaattatgtgtggatgttcaaattccacagtgttttggtggagtt
ggtggtgaagctgtttacatagatactgaagggagctttattgcacatagggtagctgac
atggcaaaagctgctgtacaacactgcacatgtatatctgcctcatcgcaaagtacagaa
gaacaagaggctttatcaacattcacagtgaaccatattctctctggtatccatgtattc
cgttgtcataactacactgaacttatagcactagtcaacttattaccagactttgttaca
gaaaagaataaggtgcatttgatagtaatagacagtattgcattccattttcgtcatgat
tttgatgatatgtctttgaggacaagactactcaatggcttggcacagaatctgatcagg
atagctactcatcagaacttagcggttgtcttgaccaatcaaatgaccaccaaagtagga
ggacataatggacactctcatctagtacctgcattaggagaaagctggggtcatgcaagc
accattaggttaatattgttctggagaaatagtcagcggtatgcaactttatacaaatca
ccaagcaagcaagaaatgactgtaccatatgatatcacactgagtggtgtgagaacagta
actcagatttcaagtaaatccaacatctctacatcagatcatgcctctgaagatggtgat
accaatcccaggaaacggttaagggttggtgacgacgagtcaagatga
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