Amphiura filiformis: 140164671
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Entry
140164671 CDS
T10871
Name
(RefSeq) U3 small nucleolar RNA-associated protein 6 homolog
KO
K14557
U3 small nucleolar RNA-associated protein 6
Organism
afil Amphiura filiformis
Pathway
afil03008
Ribosome biogenesis in eukaryotes
Brite
Ribosome biogenesis [BR:
afil03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
140164671
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTP6_C
U3_assoc_6
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
TPR_14
HAT_PRP39_C
Suf
NRDE-2
TPR_CcmH_CycH
TPR_15
Motif
Other DBs
NCBI-GeneID:
140164671
NCBI-ProteinID:
XP_072044117
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Position
11:28146234..28188892
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AA seq
595 aa
AA seq
DB search
MAEFVQQNIEETIPELEQLERVGLFAKEEIKAIIKRRTHHEYRLVRRQRDKEDFLKYIQY
EVNLLHLIKKRRNRLHYFFKKDEIEMTIITRILRLFRRTCTQNPEDLKLWSSYIEFARTW
HMMQELSRVFTRLLKVHSDKPALWIMAAKFQMEENSSSENARGLMLRALRHHPKSHKLWT
EYFRLELMNADKQRKRYALLKQSQIEPDEDDMNDAVMQGAVAQMVYKQAMQQMSDDIDLH
LAFLPICQRFDFTQHILDEIYSDLEESHADSELVWNALSRRHLSPDSEESEESIVVTEEG
KCHTVFDEAVKSIPTPKMWSMYVEFCIERLERGGSVKTSNQRARQTLNVLDRAHKACDTL
PEELFDRWLTVLLIVGGVDEAISAAQEAVTVHPTSVNLWCRYMQLVIQNITDAEQQKTNV
TKLFEKACSNLKSKNSLPLWKIAMEWCLASDPANLETLLQTGVREHKHVAMVLKEHYLDW
AYLQGGLKTVRRVYSLLAKEKPLTTEFFYKYIAIENAQTDTKMKQIRSCYEDALREFGTT
EPDLWLDFIKLELTHPNGNPSNSPSLHWRAMQALQGDHVETFTIKYTLMQTGHCS
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atggcagaattcgtgcaacagaatatcgaggaaaccattcctgaacttgagcagttagaa
cgtgtaggattgtttgctaaagaagaaatcaaagctataatcaagagaagaacacaccat
gagtacagacttgtaaggagacaacgtgacaaggaggatttcctcaaatacatacaatat
gaagtgaatcttctgcacttgatcaagaaaaggagaaataggctgcactatttcttcaag
aaggatgagattgaaatgaccatcataactcgtattctcaggctctttaggagaacatgt
acacagaacccagaagatctcaagctatggtcatcatacattgagtttgcaaggacttgg
catatgatgcaagaactaagcagagtgtttactagattactgaaagtacattcagataaa
ccagctctgtggatcatggcagcgaaatttcaaatggaagagaacagctcatcagaaaac
gccagaggtcttatgttacgagcattacgacatcatccaaaatcacacaaattatggaca
gagtatttccggcttgaactaatgaatgcagacaagcaaaggaagaggtatgccttgctg
aagcagagtcagatagagcctgatgaggatgatatgaatgatgctgtcatgcagggtgct
gtagctcagatggtgtataaacaagctatgcagcagatgagtgatgatattgatctccac
ctagcattcctaccaatatgtcaaaggtttgacttcacacaacatatattggatgagatc
tattcagatcttgaagaaagtcatgcagacagtgagctggtatggaatgcattgtcaagg
aggcacttgtcacctgactcagaagaatcagaagaatccatagtggtgacagaagagggc
aaatgtcataccgtgtttgatgaggcagtgaagagtatcccaacccctaagatgtggtcc
atgtatgttgaattttgtattgagcgactagagaggggtggctcagtcaagacaagcaac
cagagagcaaggcaaacactgaatgtgttggacagggcacataaagcctgtgacacactt
cctgaagaactctttgatagatggcttacagtactgctcattgtaggaggtgttgatgag
gctatcagtgcagcacaagaggccgtcactgtgcatcctacatcagttaatctgtggtgt
cgctatatgcagctcgtcatacagaatataacagatgcagagcagcaaaaaacaaatgtg
acaaaactatttgagaaggcttgttcaaatttgaagtcaaagaactcactacctctgtgg
aaaattgccatggaatggtgcttggctagtgacccggcaaatctagaaacacttcttcag
actggtgtaagagagcacaagcatgttgccatggtattaaaggagcactacctagattgg
gcatacctgcaagggggtctcaagacagtgagaagagtctattctttacttgctaaagaa
aaacctctaactactgagttcttctataaatacattgccattgaaaatgcacagactgat
accaagatgaaacaaatccgtagctgttatgaggatgctttgagggagtttggaacaact
gaacctgatctatggctagactttatcaagctagagctgacgcatcccaatggcaaccca
tcaaacagcccatcgctacactggagagcaatgcaagccttacagggtgatcatgtagag
acattcaccatcaaatatacattaatgcaaactggtcactgcagctaa
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