Amphiura filiformis: 140164674
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Entry
140164674 CDS
T10871
Name
(RefSeq) serine/arginine-rich splicing factor 1A-like
KO
K12890
serine/arginine-rich splicing factor 1
Organism
afil Amphiura filiformis
Pathway
afil03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
afil00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
140164674
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
afil03041
]
140164674
Spliceosome [BR:
afil03041
]
Common components
Common spliceosomal components
SR proteins
140164674
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_occluded
RRM_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
140164674
NCBI-ProteinID:
XP_072044125
LinkDB
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Position
11:28454148..28481994
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AA seq
273 aa
AA seq
DB search
MAGFGGGGGGGGGGGGGGGGGSGNNDCRVYVGNLPPDIRSKDIEDIFHKYGKIADIDLKI
SRDSDGPRSRRPPFAFVEFQDRRDAADAVYGRDGYDYDGYRLRVEFPRGGRGGGSGGGGG
GGGGGGGPSGGGSGGRRGGAPPMRSDYRCFVTGLPPTGSWQDLKDHMREAGDVCYADVYR
DGSGVVEFRREQDLKYAVRVLDDTKFKSHEGETSYIRVKVDKPYLRSRSRSLSPINRRGR
GSPRYSPARRSFTPSPRRGSRSRSYSRSRSSSS
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atggcaggtttcggtggtggtggcggtggcggtggcggtggcggcggcggcggcggcgga
ggtagtgggaacaatgactgccgtgtttatgtaggcaacctaccaccagacatcagatct
aaagacattgaagacatctttcataagtacggcaaaatcgctgatattgatctgaagatc
agtcgggattcagacgggcctcgatcacgcagaccgccgtttgcttttgttgagtttcaa
gatagaagggatgcagccgatgcagtgtatggcagagatgggtacgattacgacggctac
cggttacgagtggagttcccccgtggagggcgtggtggcgggagtggaggaggaggtggt
ggtggaggtggtggtggtggtccaagtggaggtggtagtggtggaagaagaggaggagcg
cctcctatgaggtccgactacaggtgctttgttacaggtttacctcctacagggagctgg
caggatttaaaggaccacatgagggaagcaggtgatgtatgctatgcagacgtgtacagg
gatgggtctggagttgtagagtttagacgagaacaagatcttaaatatgcagtcagggtg
ctggatgataccaaattcaaatcacacgagggtgaaacatcctacatccgagtgaaagta
gacaaaccatacttgagaagcagatcgagaagcctctcaccaatcaaccgacggggaaga
ggttccccgaggtactcacccgctcgtcgttcatttaccccgtcgccgcgacgaggctcg
aggtctaggtcatactctcgttcgaggtcaagctccagttga
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