Amphiura filiformis: 140165180
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Entry
140165180 CDS
T10871
Name
(RefSeq) replication factor C subunit 2-like
KO
K10755
replication factor C subunit 2/4
Organism
afil Amphiura filiformis
Pathway
afil03030
DNA replication
afil03410
Base excision repair
afil03420
Nucleotide excision repair
afil03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
afil00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
140165180
03410 Base excision repair
140165180
03420 Nucleotide excision repair
140165180
03430 Mismatch repair
140165180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
afil03032
]
140165180
03036 Chromosome and associated proteins [BR:
afil03036
]
140165180
03400 DNA repair and recombination proteins [BR:
afil03400
]
140165180
DNA replication proteins [BR:
afil03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
140165180
DNA Replication Termination Factors
ELG1-RFC complex
140165180
Chromosome and associated proteins [BR:
afil03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
140165180
DNA repair and recombination proteins [BR:
afil03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
140165180
Check point factors
HRAD17(Rad24)-RFC complex
140165180
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_22
nSTAND_NTPase5
Rad17
AAA_14
RCF1-5-like_lid
AAA_lid_RFC1
Viral_helicase1
Mg_chelatase
AAA_16
AAA_11
AAA_5
nSTAND3
ABC_tran
AAA_28
RuvB_N
AAA_19
AAA_assoc_2
AAA_24
Gp44_lid
AAA_18
AAA_25
MeaB
AAA_23
MipZ
NTPase_1
AAA_30
SLFN-g3_helicase
bpMoxR
RNA_helicase
Motif
Other DBs
NCBI-GeneID:
140165180
NCBI-ProteinID:
XP_072044724
LinkDB
All DBs
Position
11:complement(67782842..67817187)
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AA seq
352 aa
AA seq
DB search
MASEKVEAMETESNTKKDAPSKSGKSGSSTYQAPWVEKYRPTLLSDVVGNEETISRLGVF
AKEGNVPNIIIAGPPGTGKTTSILCLARALLGPSYKEAVLEMNASNDRGIDIVRNKIKMF
AQKKVTLPKGRHKIIILDEADSMTSGAQQAMRRTMEIYSKTTRFALACNASDKIIEPIQS
RCAVLRYSKLTDKQLLKRLLEVCEMESVDHTDDGLEAIIYTAQGDMRQAVNNLQSTHSGF
GVVNSENVFKVCDEPHPLLIKDMLGHCLQADIDKAFEVMQHMWRMGYSPEDIIGNMFRVC
KTFQMAEYLKLEFIKEIGFTHMRIAEGVNSLLQLSGLLARLCQKSALPPEEA
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atggcatcagaaaaagttgaggcaatggagaccgagtcgaatacaaagaaagatgctcca
agtaaatctgggaaatcaggatcatcgacgtaccaagctccatgggttgagaagtacaga
ccaactttgctatcagatgttgtcggaaatgaagaaactatcagcaggctgggtgtgttt
gccaaagaaggaaatgtaccaaatatcattattgctggtccaccaggaacaggaaaaaca
acaagtattctctgcctagcgagggcgctcttgggaccatcttataaagaagcagtatta
gaaatgaatgcatcaaatgacaggggtattgatattgtgaggaataagatcaagatgttt
gctcagaagaaagtcacattaccaaaaggacggcataaaatcatcatcttggatgaggca
gacagtatgaccagtggagctcaacaagccatgagaagaacaatggaaatctactccaag
acaaccaggtttgccctggcgtgcaatgcatctgacaaaatcattgaacccatccaatca
cgatgcgctgtcttacgatattccaaactcaccgacaaacagctgctgaagcgattactt
gaagtatgtgagatggagagtgtagatcatactgatgatggtttagaagcaatcatatac
acagcacaaggagatatgagacaggctgtcaacaatctacagtccacacattcaggtttt
ggagtggtcaatagtgaaaatgtattcaaggtttgtgatgagccacatccactattaatc
aaagatatgttaggacattgtctccaggctgacattgataaggctttcgaagtcatgcag
catatgtggcgtatgggatactccccagaagacatcataggaaacatgttcagagtttgc
aagacttttcagatggcagagtaccttaaactagaatttatcaaggagattggattcact
catatgagaattgcagagggagtgaactcacttcttcaactttctggactcttagcaagg
ttatgtcaaaaatcagctcttccacctgaagaagcctaa
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