Amphiura filiformis: 140165503
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Entry
140165503 CDS
T10871
Name
(RefSeq) LOW QUALITY PROTEIN: deubiquitinating protein VCPIP1-like
KO
K11861
deubiquitinating protein VCIP135 [EC:
3.4.19.12
]
Organism
afil Amphiura filiformis
Brite
KEGG Orthology (KO) [BR:
afil00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
afil01002
]
140165503
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
afil04121
]
140165503
Enzymes [BR:
afil01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
140165503
Peptidases and inhibitors [BR:
afil01002
]
Cysteine peptidases
Family C64
140165503
Ubiquitin system [BR:
afil04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
OTU
140165503
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VCIP135_N
OTU1_UBXL
OTU
ubiquitin
PB1
Motif
Other DBs
NCBI-GeneID:
140165503
NCBI-ProteinID:
XP_072044894
LinkDB
All DBs
Position
12:complement(18311307..18341404)
Genome browser
AA seq
1331 aa
AA seq
DB search
MCLPLCLGSWCPVSLFSIASQFTDIARPFVVFPSFLGSTTEVCKRDLHVVRLTIRTQDAA
PSKTAERYRILCGICPDESCKTKLYFPSYDTSIECSNCGQRHPRSAMVSVEEVTDPEVAL
HNMIRNLLVGNFVPKKTADSVKVLGLSNYHCKLLSPLLTYYGMDKQDKARPLREVNQKDV
FDCSVLGSRAFLIQPEHIGIMGYGRDQTGSAKYLAETLQMIYNFHDGQEVLVPIHADGDG
HCLVHGISRALVGRELFWHALRTNLKAHFLENLERYKNLFCDFVDAKEWDIIIAESDPEY
LPGPNEAFGLQNIHIFGLANVLHRPIILLDSLSGLQSSGDYTGVFLPGLVPPEECRDKDG
KLNKPLCIAWSSSGRNHFIALVGVKGKRPLPRLPHWMLTKAWGMPHELISSYIEFDKDNM
CIVGGDRSLQDKYIQRLATAMEAVFLEKSGVHPSVVADVHHYIYKRTGVVGVQMDIIIEN
TRRAVQDNQLYRCLMCXSVSQIEPQCIPTERLGPGGDLYDMAKKLYKKLDPTKIYSMPAQ
DITCSYDPVKDVLVATPKPQSAQCAWCQGKQLRLVRADGTVLYQNGDRTSTPAPKTRCNC
GYKHYWDAKEYDNHPAVFPVKMTWKGESVTEEIVWFQNESDQSLNSNAFDIALSLVQKHF
PGEFGSEKLVQQVVDTILQNTAKVEETYEPISLKNMPSPTSSPCTTEAAISSAGSSSESH
ATIKEKAVKDDTNQAIAGKKGKASKGTGLSTPGFGQSASKIILTGHAQKTLHKEELTMSQ
AEKDLRQKIEHKASVRQRQKSAEQAIKFQKSSQVPPLTKQTSEPIMSASTKAKAGSMGVS
SDQEKKAVPARVKKIRVTTSDGRQATISLDNSITFSELQNKIESELQIPAIQQRIRCGFP
PKELRRPEEGQENEPLPLQNGDKVMVEVIPDPSDKPRESPMDTGRSVVKSSSMEASTSSG
ESSLDDVAIAGEIMRNLERLQQGSNTSDELDMQLNALPLLATLTGVDLWTYAQRNPHFFE
RGGMYYRIVQRDLGLVDGKHCTLPNLANKKFYYNGLKDHLELCLEPLGHFPISVGIDDPQ
KLSEIAAGLSSSSSQRSEEAIHVGQGSLSAGGSGVVKQGHHKKDTYVAFGGQAHTLSTDS
GDRERDARPKMSKEDHVVKYNPNEVHDISQVPEHESSSKERDSKESYDIAGDRPSHLDSE
DHDGDERDTAMDTDAVSRLDAQSGPSSPMEVEPSTEFPSVNVDTGLNRQITDGSPREHSS
ASDIPEASQTHQSTSRIVHVQEESSITTTTTTTTSTESMYVSKKLGPGYTVLMKKPASGM
SEEEDGDGGET
NT seq
3996 nt
NT seq
+upstream
nt +downstream
nt
atgtgccttcctctctgtttagggtcttggtgccccgtctccttattttccattgcttca
cagttcacggacatcgctagaccttttgttgtgttcccgtcatttctaggatccactact
gaagtctgcaaaagagacctacatgttgttagactgacaatacgaacacaagatgctgcc
ccttccaaaacagccgagcgttatcgcattctttgcggcatttgcccagacgagtcgtgc
aaaacaaagctctactttccatcatatgacacaagtattgaatgctccaactgtgggcaa
cgccatccacgcagcgccatggtcagtgtagaggaagttaccgacccagaggtggcgctt
cataatatgatacgtaatcttctggttggtaactttgtgcccaagaagacagccgattct
gtcaaagtacttggtctatcgaattatcactgcaaactactgagcccattgttaacgtat
tatggcatggacaaacaggacaaagcccgtcctctgcgagaagtcaaccaaaaggacgtg
tttgactgttccgtgttaggcagtcgcgctttcctaattcaacctgagcatatcgggatc
atgggttatgggcgtgatcaaacaggaagtgcaaagtatctggctgaaacgcttcaaatg
atctacaattttcatgacggacaagaagttcttgtcccaatccatgccgacggggacgga
cattgtctcgtccatgggatatccagagcgcttgtgggtagggaactcttctggcatgca
ctgagaactaatctgaaagcgcacttcctagagaacttggaacgctacaagaatttgttt
tgcgattttgtggatgcaaaagagtgggacatcatcattgcggagagtgatccggaatat
ctgccaggacctaatgaggcatttggattgcagaacattcacatctttggtttagccaat
gttcttcatagacccatcatcctgttggattcattgagtggattgcagagctctggagat
tacacaggtgtattccttccaggtttggtgccgccagaagaatgccgtgataaagatgga
aaactgaacaaaccactgtgtatcgcatggagtagctcgggtagaaaccacttcattgca
ctagttggcgttaaaggtaagcgtccattaccaagactaccacactggatgttaacaaaa
gcttggggtatgcctcatgagctcatctcatcctacatagagtttgataaagacaacatg
tgtattgtgggaggtgacaggtctctgcaggataaatatattcagcggttggctacagct
atggaggcagtgtttctagaaaagtctggcgtccatccctctgtggttgcggacgtccac
cattacatctacaaacgtacaggtgtagtgggtgtacagatggacattatcatagagaat
accaggcgggctgtgcaagacaaccagctgtatagatgtctcatgtgtnaatcggtatcc
cagatagaaccacagtgtataccaacagagaggctaggacctggtggagatctctacgat
atggctaagaagctctataagaaactggatccaacaaagatatactcaatgccagcacaa
gatatcacctgtagctatgacccagtgaaagatgtgttagttgctactcccaaaccgcag
tcggctcagtgtgcctggtgtcaaggaaagcaattacggcttgtgcgtgctgatggtacc
gtgttgtatcagaatggcgatcgtacttctacacctgctccaaagacaagatgtaattgt
ggctataaacactactgggatgccaaagagtatgacaaccaccctgctgttttcccagtg
aaaatgacatggaagggtgaatcagtaacagaggaaattgtgtggttccagaatgaaagt
gaccagtccctaaacagcaatgcctttgatatagccttgtcactagtacagaaacacttt
ccaggagagtttggcagtgagaagctggtacaacaggtggtggatactatactgcaaaat
actgccaaagtagaagaaacatatgagcctatctctctgaaaaacatgccaagtccaacg
tctagtccctgtaccacagaggcagctatatcgtctgctggctcctcatcagaatcgcat
gctaccatcaaagaaaaggcagtgaaggatgacacaaaccaggccatagctggtaaaaaa
gggaaggcgtctaaagggacaggattatccacaccgggttttggacagtcagcttctaaa
atcattctaactggtcatgctcaaaaaaccttgcataaagaggagctcaccatgagtcaa
gcagaaaaggatctcagacaaaaaattgaacacaaggcttcagtacggcagagacaaaag
tcagcggaacaggccataaagtttcagaaatcttcccaagttccaccattaacaaaacaa
accagtgagccaataatgagtgcatccacaaaggccaaagcagggagtatgggtgtgtct
tcagaccaagagaagaaagctgttcctgctagagttaagaagatacgagtgacaacttct
gatggaagacaggctaccatatcattagataattccataaccttctctgagctacaaaac
aagattgaatctgagctgcagatccctgctatccaacaacgcatccggtgcggcttccct
ccaaaggagctcagacgaccagaggaaggacaagagaatgaaccattaccactgcagaat
ggagataaggttatggtggaggtaataccagatcctagtgacaagcctagagagtcgccc
atggacacaggaagatccgttgttaaaagttcaagtatggaagccagtacatcatcagga
gaaagttctttagatgatgtggcaattgcaggagaaatcatgaggaatttagagcgctta
caacaggggagtaatacaagtgatgaattggacatgcaactcaatgctttaccactgtta
gcaacgctgactggcgtggatctgtggacatacgcacagagaaacccacatttctttgag
agaggtggtatgtattatcgaatcgtgcagagagatctggggttggttgatggcaagcat
tgtacactgccaaatttagctaataagaaattttactacaacggactgaaagatcacttg
gaactttgtttggagccgttaggtcacttcccaattagtgttggcattgatgatcctcag
aaactgtcagaaatagcagctggactatctagtagctcaagtcaaaggtcagaagaggcc
atacatgtaggtcaagggtcactcagtgcagggggtagtggtgtggtcaagcaaggacac
cataagaaagacacgtatgttgcatttggcggacaggctcatacgttatcaacagacagt
ggtgatagagaacgagatgcgagaccaaaaatgagtaaagaggaccatgtcgtgaagtat
aacccaaatgaagtacacgatattagccaggttccagaacatgaatcatctagcaaagaa
agggactcaaaagagagttatgacattgcaggtgatagaccatcccatttagatagtgag
gatcatgatggtgatgaaagagacactgcaatggacacagatgctgtaagtagacttgat
gcacagagtggcccatcttcccctatggaagtggagccatccacagagttcccatctgta
aatgttgacacgggtttgaatcgccaaattacggatggttcaccgagagaacattctagc
gcaagtgatattcctgaagcttcacagactcatcaaagcacatctaggattgttcatgta
caagaagagagctccatcactactactaccactaccaccacctccacagaaagtatgtat
gtatcaaagaaactgggtccagggtatacagtactgatgaaaaaaccagcttccggtatg
tctgaggaggaggatggagatggtggagagacttga
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