Amphiura filiformis: 140165835
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Entry
140165835 CDS
T10871
Name
(RefSeq) LOW QUALITY PROTEIN: transcription initiation factor TFIID subunit 2-like
KO
K03128
transcription initiation factor TFIID subunit 2
Organism
afil Amphiura filiformis
Pathway
afil03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
afil00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
140165835
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
afil01002
]
140165835
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
afil03021
]
140165835
03036 Chromosome and associated proteins [BR:
afil03036
]
140165835
Peptidases and inhibitors [BR:
afil01002
]
Metallo peptidases
Family M1
140165835
Transcription machinery [BR:
afil03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
140165835
Coactivators
SAGA/TFTC/STAGA complex
140165835
Chromosome and associated proteins [BR:
afil03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
140165835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_2
Peptidase_M1
Peptidase_M1_N
Motif
Other DBs
NCBI-GeneID:
140165835
NCBI-ProteinID:
XP_072045257
LinkDB
All DBs
Position
12:complement(14569034..14657481)
Genome browser
AA seq
1207 aa
AA seq
DB search
MSRGAKRQDRSFESPRDFRLSHQILCITGVNFSRKSIIGYVELHLLPLRSNVNRIKINSK
QCRIYRACINEVWEASFLYSDPTLAVCQNEAKQHDLNYFSACHYDAVSFVDPDKGNGELN
IKIPQDAMYLVNEQKMLRVSIEFSLERPSGGMHFVVPEMEGSMAERGAHMFTYGIENACR
LWFPCIDSYSEPCTWKLEFTVDAAMIAVSCGDLIETVYTPDMKKKTFHYVLNLPTSAANI
ALAVGPFEVLVDPYMPEVTHFCLPKLMPLLEHTTEYLHQAFDFLEESLGTRYPFSYYKQV
FVDEAFVDAAAYMSVTIFNTNLLHSSRIIDQTFLTRRLMAQALAEQFFGCFINPETWSDA
WLTKGISKYLTGLLLKKTFGVNEYRYHINRELTDLCNYEQEIGGVVLHTDPIQLPGVKEI
IGTGNPTVDEVNTGNNLYFPNKHPHTISWKYMEMREIKAHLVMRLIELKIGQDLILQVFN
KLLSLATQAATQKFLYDTWSNMLISTLGFLKLLSTVSGKDLNAFLDQWLCRGGIVQFQGS
FHFNRKRNVVELELRQDPGRTGIARYVGPLQVTIQELDGSFTHTLQVEDNLTKGEITCHS
KSRRHKKKKIPLINGEEVDMDLSAMDADSPVLWIRVDTEMTLLRQVIFQQPDYQWQYQLR
YERDIVAQIEAIQNLENFASQPSVGTLTETIENDQCFYRVRMTAAHSLTKIANGLVASYS
GHTAMIAIFKRLFGAYSCPDIVRQNKFSNFQSYFLQKTIPVALAKIRNAHGLCPKESLAF
LVELIKYNDNNRNKFSDNYYRAALIDALTGTVTPAVAMVSTSTESLTPETKVVLEEVTRC
LNLEKLLPCYHHTVTVACLKAILTLQKNGHLPSDPTLFQTYAQYGHFMEIRLAALEALVD
YVKVETNADILSWLLDIVEQDPVPTVRHTVLHMLIRNPPFKHKEQSALSTDALVERLWTF
INSGTSHDSRLRCDAVDFYYVLFGKSRPSCLPIPELGMVLNLKERKTTLNPALIPDSESY
EKWYGKGKKNPEFHSSFSSFRQHGLETAGGADEGMMSDLDSSFDRKRHSSSPIISPGSTS
MQSSSYPEREGDVSIDSKIRVLSSPVDDYNESQTLMSPPGQEMLSPSTPSSNIKEEPVDS
LQSDGGTSSRLASDTGDSNRPGLHRNDSKQSLSSDTSKTQKKKKKKEKHKHKKHKHEKGD
KSSSSTH
NT seq
3624 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagaggagctaaaagacaggacaggagtttcgaatctcctcgggatttcagattg
agccaccaaatcctgtgcataactggagtaaacttctcaagaaaatcaatcattggctac
gttgagcttcatcttctaccattgagatctaatgtgaatcgtatcaagataaacagtaag
caatgtcgtatctacagagcttgtatcaatgaagtatgggaggcgtcttttctatacagt
gatccaacattggctgtgtgtcaaaatgaagccaaacaacatgacttgaattacttctca
gcatgtcactatgatgcggtcagctttgtggacccggataaaggcaatggagaactcaac
atcaagatacctcaagatgctatgtatcttgtcaatgaacaaaagatgttgcgtgtgagc
attgagttttccctggagaggccgtctggtggtatgcattttgtggttccagagatggaa
ggaagtatggcagagagaggtgcacacatgtttacctatggaatagagaatgcctgccgc
ctgtggttcccatgtattgattcctactcagagccgtgtacatggaagcttgaattcact
gtagatgcagccatgatagcagtatcatgtggtgatcttattgagactgtctacacacct
gatatgaagaagaaaacattccattacgtgctcaacctgccaacatctgcggctaatatt
gctttagctgtgggtccatttgaggttctggtggatccatacatgcctgaagtgacacac
ttctgtttacctaagcttatgcctctactggaacatacaacagaatatctacatcaggca
tttgacttcctagaagaaagccttggtacccgctatccatttagctattataagcaagtg
tttgttgatgaggcatttgtggatgctgctgcttacatgtcagttactatcttcaacacc
aacttgcttcactcttcacgcatcatagaccagactttccttaccagacgtctgatggcc
caggcattagcagagcagttctttggatgtttcatcaacccagagacatggtctgatgcc
tggttaactaaaggcatatccaagtatttgacaggtctgctactcaagaagacatttggt
gtcaatgagtatagatatcatatcaacagggaactcacagacttgtgcaattatgaacaa
gagataggcggagtagtcttacacacagaccccatccaactgccaggggtcaaggagatc
atcggtactggaaacccaactgtagatgaggttaacactggtaacaacctgtatttccca
aacaagcatcctcatactatatcatggaagtatatggagatgagagagatcaaggcacat
ctggtgatgaggcttatagagctgaagataggacaagatctgatacttcaggttttcaac
aagttgttatctctagccactcaagcagccacacagaaatttctgtatgacacatggagt
aatatgctcatctcaacactcgggtttttgaagctgttatcaactgtatcaggcaaggat
ttgaatgctttcttggaccagtggctatgcagaggtggtatcgttcaatttcagggtagt
tttcatttcaaccgcaagaggaacgtggttgagttggaattacgacaagatcctggcagg
actgggattgctagatatgtggggccacttcaagtgactattcaagaacttgatggatct
ttcacacatacattacaagtagaagacaacttgaccaaaggagaaatcacatgccattcc
aaaagcagaagacataagaagaagaagattccattaatcaatggggaggaggtggatatg
gaccttagtgcaatggatgctgattcaccagtattatggatccgtgtggatacagagatg
acgctgctacgtcaagtgatattccaacaaccagattatcagtggcaatatcagttacga
tatgaaagggatatagtagctcaaatagaggcaatacagaatttggagaattttgccagc
caaccctctgtaggaaccctcacggaaaccatagaaaatgatcagtgcttctacagggta
cgcatgacagctgctcacagtctcaccaagattgctaatgggttagtagcctcatacagc
ggacacacagccatgattgcaatcttcaagagactatttggtgcttattcttgtcctgat
attgtcaggcaaaacaaattctctaatttccaaagctacttccttcaaaagactatacca
gtagctttggccaagatcaggaatgcacatggtttatgtccaaaggaatcactggcgttc
ttggttgaactaattaagtacaatgacaacaacagaaataagttttcagacaattactac
cgtgcagcacttattgatgctctcacagggacagtgactccagcagtagctatggtcagc
actagcactgaaagtcttacaccagagacaaaggtagtattagaagaagtgacccgatgc
ctcaatctggagaagctactgccctgttatcaccatacagtgactgtggcttgtcttaag
gctatactgacactacaaaagaatggtcacttaccaagtgacccgacactattccaaaca
tacgcccagtatggacactttatggagattagattggccgccctggaggcacttgtggac
tatgtcaaagttgagaccaatgcagacatcctgtcatggctattagacatagtagaacaa
gacccagtccctacagtaagacatactgtactacacatgctaatacgcaatcctcccttc
aaacataaggagcaatcagcacttagtacagatgctttggtggaaagactatggacattt
atcaattctgggacatctcatgattccagattacgttgtgatgcagtggatttctactat
gtgttatttggtaaatcaaggccttcatgtttacctatacctgagcttggtatggtcctg
aatctcaaagaaaggaagaccacactaaacccagccctgattcctgactcagaatcctat
gagaaatggtatgggaaaggtaaaaaaaatccagaatttcatagctctttcagcagtttc
aggcaacatggactggaaacagcaggaggagcggacgaaggcatgatgtcagatttagac
agtagctttgataggaaacggcactcaagcagccccataatatctcctggttccactagt
atgcagtcatctagttatcctgaaagggagggagatgtcagcattgacagtaaaatcaga
gttttgtcatctcctgtggatgattataatgaatcgcagactttgatgagtccaccaggt
caagagatgctgagtccatccacacctagtagtaatatcaaggaggagccagtagattca
ttgcagagtgatggaggtacaagcagtcgtctagcctccgacacaggagactctaatcgc
ccaggattgcacagaaatgactctaaacaatcactatcaagtgacaccagtaaaacacag
aaaaagaagaaaaagaaagagaagcataaacataagaaacataaacatgagaaaggcgat
aaaagcagctcaagtactcactaa
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