Amphiura filiformis: 140165853
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Entry
140165853 CDS
T10871
Name
(RefSeq) LOW QUALITY PROTEIN: mRNA export factor-like
KO
K14298
mRNA export factor
Organism
afil Amphiura filiformis
Pathway
afil03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
afil00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
140165853
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afil03019
]
140165853
03036 Chromosome and associated proteins [BR:
afil03036
]
140165853
Messenger RNA biogenesis [BR:
afil03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
140165853
Chromosome and associated proteins [BR:
afil03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
140165853
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR5
WD40
Beta-prop_EML_2
WD40_Prp19
Beta-prop_WDR3_1st
WDR55
WD40_CDC20-Fz
WD40_WDHD1_1st
EIF3I
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
WD40_Gbeta
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_RIG_2nd
Beta-prop_TEP1_C
Beta-prop_Aladin
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_1st
WD40_RFWD3
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
eIF2A
Beta-prop_WDR41
WD40_MABP1-WDR62_2nd
Beta-prop_ACSF4
Beta-prop_RSE1_2nd
Beta-prop_Nup120_160
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
140165853
NCBI-ProteinID:
XP_072045285
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Position
12:complement(16029524..16069594)
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AA seq
376 aa
AA seq
DB search
MSLFPSQTSAFGGGSSGLFGGGNVGQTTTATGSHNPMRDVEVTSPPDDSISSLEFSPSSI
PATFLIGGSWDNNVRCWEVQPSGQTVPKAQQTHTGPVLDVAWHDDGTKVFTASCDKTAKM
WDLNSNQAIQIAQHDAPIKSIHWIKAANYSCCMTGSWDKTLKFWDTRSPNPMMTIQLPER
CYCADVVFPMAVVGTAGKNIIIYQLDNQPTEFKRMESPLKYQHRCVAIFKDKKNMPTGFA
LGSIEGRCAIQFVQAANPKDNFTFKCHRSNGTSSYYQDIFAVNAIAFHPEHGTLSTAGSD
GKFSFWDKDARTKLKTSEQMEQPITACAFDAKGSIFAYAVSYDWSKGHEQYNPQKKNYIF
LRGNATEELRPRNRKR
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgtctctgtttccaagccagacgtcggctttcgggggtggcagcagtggactctttgga
ggaggtaatgtaggtcagacaacaacagcaactggttcacacaatcccatgagagatgtg
gaggtaacgtccccaccagatgatagtattagctctttggagtttagtccaagctctata
ccagcaacattcctcattggagggtcgtgggacaataatgtgagatgttgggaggtacag
cctagtggtcaaaccgttccaaaagctcaacagacacacacaggtccagtgctagatgtg
gcgtggcacgatgatggtacaaaggtgttcacagcatcttgcgacaaaacagccaaaatg
tgggatctcaatagcaaccaagccatacaaatagcacagcatgatgctccaatcaaaagt
attcactggattaaggcagccaactactcatgttgtatgacaggaagctgggataagaca
ctcaagttctgggatacacgatctccaaacccaatgatgaccatacagctacctgaaaga
tgctactgtgccgatgtggtattcccaatggctgtagtaggaacagctggcaagaatatc
atcatatatcaactagacaaccaacccacagaattcaaacgcatggaatcaccgctcaaa
tatcagcaccggtgtgtagcgattttcaaagacaagaagaacatgccaacaggatttgca
ttagggagtatagaagggcgctgtgccatacagtttgtgcaagcagctaatccgaaagac
aactttacattcaagtgccatagatccaacggaacatcaagttactaccaggatatattt
gctgtgaatgccatagcattccatccagagcacggtaccctatctacagcaggctctgat
ggtaaattcagcttctgggacaaagatgccaggaccaagctgaagacatcggaacagatg
gaacaacccatcacagcttgtgcgtttgatgccaagggcagcatatttgcatatgcagtc
agctatgattggtcaaagggtcatgagcaatacaacccacagaaaaagaactacatcttc
ttacgaggtaacgccaccgaggaactcagacccaggaaccgcaagcgataa
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