Amphiura filiformis: 140168023
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Entry
140168023 CDS
T10871
Name
(RefSeq) LOW QUALITY PROTEIN: protein patched homolog 1-like
KO
K11101
patched 2
Organism
afil Amphiura filiformis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sterol-sensing
Patched
Motif
Other DBs
NCBI-GeneID:
140168023
NCBI-ProteinID:
XP_072047462
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All DBs
Position
1:complement(20908808..20984601)
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AA seq
1394 aa
AA seq
DB search
MERWAGSATPDSEDGRMSPIRPPDQDFIYDELLTRPSWCNAGFAYREIERGRAEPGAQGS
KTALRVRGKIQAVLFSLGCYIQGHSGKFLFLGMLIMAILSVGLKVAKIETDVEKLWVEVG
GRLQRELRYTKQTLGEGEGITHQIIIQTPQNQGTDILTHKALLQHVRSALLATQIEVDMY
GLTWDFRDVCYITPYPSFEDNLLDGIINELMPCTIIXPLDCFWEGPVYWARRIIHIPDYE
EPVRWTNLDPQALLTVFEKYRDYVAPEALEDIFNRTGIGHAYQNKPCLNPFDPECPDSAP
NKESGKIPDIAAAMNGGCAGYASTYMKWPEELILGGVKRNRTGHLQSAEALQTLLLLNGQ
KEMYELWKNDFKVSDILWTPERAKAIIDEWERKFTEAVRNSSYPNSTQDVNAFSAASLED
LLQEFSEMSMVHIAMGYFIMVVYACLTMVKFYNGVQSQGGVGFFGVILVAGAVTASLGVC
AAVGISFNASTTQVLPFLALGVGVDDMFLLAHSSTSIPKEIPLNMRTGEVLRRSGVSVLL
TSVNNLCAFLLAAVIPIPALRSLSIQFAIVIVFNFLAVILVFPAILALDAERREARRVDI
FCCFKSSSANRVIRVEPRPLADTVNNNRRHRHYPSDTNVTVESTVQSVTHAAQQPGGRCT
TVLHPAAKKADSSGAVPPVLETPPSTAGSTSASTRTLIRQNSFERGQSGSWRKRWQEKAK
CWRWSLSGFARGYYAPFLQKLHVKFAVIVLFACLLGASIYGVFLIEDGLDLTDVVPRGTR
EEDFLQVQNEYFSFYSMYAVTEKDYDYPHRQRQLYAFHDEFRNIPEVIRDTDGSLPTFWL
QDFRDWLIDMQKAFDVDKAGYSIQYNKWYSNASDKGVLAYKMMVQSGEAEIPFDLQRFHH
GRLVDDNGIIYAGAFYHYLTVWINYDTLSYAASQGNIHPQPSAWQPGGKTEHDLTIPRAR
AINYTQIPFYLDGLRETEDFVRVIKSVRNLSSYYAQEGLPNFPRGVPFTFWEQYLDLRFY
LGLTLASVLGASFLVITIMLVNPWAALIMVLVLGMITVELFGFMGLIGIKLSAIPAVTLV
ISVGIGVEFTLHMCYAFLTSIGDRDKRMAVAVEHTFSPIVDGALSTLLGVIMLAGSEFDF
IVSYFFHVFSALIVIGLLNGVVLLPVLLSLIGPPGEVKLPNDADRLTTPTPPPTPVMTRG
YDMHGMPPRPPRGRNTPHAWDRESQGSSQSSVRDDAYHQGFASEHIEIHPQVFVETTCHA
PYSREEHKCNRPHRKPTSYTHRPTRAPHRTMHPHIPQSYSSSSPSSSPPHSPHPSPPPRP
HHSPKISRHTTRTTVTATARVSIVHGMACGVESPSSRRDNYRYYSRKNRKNEKQEDKCGL
PELEIKDYNSDSTV
NT seq
4185 nt
NT seq
+upstream
nt +downstream
nt
atggagcgttgggcaggttctgccaccccagattctgaggacgggcgaatgtcgcctatt
cgacctccggaccaggattttatatacgatgaactattaactcgtcctagttggtgcaat
gctggattcgcatatcgtgaaatcgaacggggaagagcagaacctggagcacaagggagc
aaaactgctcttcgtgtacgagggaaaatccaggctgtgttgtttagtttgggatgctat
atccagggacatagcggaaaattcttatttcttggtatgctcatcatggcgatattatca
gttggattgaaagttgccaaaattgagacggacgtggaaaagctgtgggtagaagttggt
ggaagattacaaagagaacttagatataccaaacaaactctcggggaaggggaagggatt
acacatcaaattattatacagacgccgcagaatcagggaaccgatatcctcacgcataaa
gctttattacaacacgtgaggtctgcgttattagcaactcaaatagaagtagatatgtat
gggctgacttgggatttcagggatgtatgttatataactccatatccttcttttgaggat
aatttattagatggtataattaatgaattaatgccttgtactataattnacccgttggat
tgcttctgggagggtcccgtttattgggcccgaagaataatacatattccagattatgag
gaaccagtaaggtggacaaatttagatccgcaagcattgttaacagtttttgaaaaatac
cgtgattatgtagcaccagaagcattagaagatatatttaatagaacgggcataggacat
gcatatcaaaataagccttgtttaaatccatttgatcccgagtgtcccgactcggcccca
aataaagaaagtggaaagattcctgatatagctgcagcaatgaatggaggatgtgctgga
tacgcatctacatacatgaagtggccggaggaattgatcctaggaggggtcaaaagaaac
agaacaggtcacttacagagtgctgaagcccttcaaacgttacttctcctcaatgggcaa
aaagaaatgtatgaactgtggaagaatgacttcaaagtcagcgacatcctctggacaccc
gagagggccaaagccatcatcgatgagtgggaaaggaaatttacagaggcagtaagaaac
agctcttacccaaactcaactcaagatgtgaatgcattcagtgcggcatcattagaggat
cttcttcaggagttctctgagatgagcatggtgcatattgcaatgggatatttcattatg
gtggtgtatgcatgcctaaccatggtgaagttctacaatggggtccagtcacagggtggg
gtggggttcttcggggtcatactagtagcaggggcagtgaccgccagtttgggggtctgt
gcggcggtaggcatcagttttaatgcctcaacaactcaggtgcttccatttcttgcttta
ggggtgggcgtggacgacatgttcctattagcacactcatctacctcaattcccaaagaa
attcctctaaatatgcgtacgggtgaagtacttagacggtcgggcgtcagcgtgttgttg
acatcagtcaacaatttatgcgcttttttactggcagctgtaataccaattccagcccta
cgctcattatctatacaatttgcaatagtaatagtattcaactttcttgcggtaatccta
gtcttcccagctatattagcattagatgcagaaaggcgagaagccagacgggtagatatt
ttttgctgttttaaaagttcaagtgcaaatagagttatccgggttgaacccagaccatta
gcggatacagtaaacaataacagaagacacagacattatccatcggatacaaatgtaact
gttgaatctaccgtacaatcggtaactcatgctgcacagcagccaggcggtcgatgcacg
accgtcttacaccccgccgccaagaaagcggactcatccggagctgtgcctccggtttta
gaaacgccaccatccactgcagggtcaacctctgcgtcgacaagaacgcttataagacag
aactcttttgagagaggtcaaagtggaagttggagaaaaaggtggcaggaaaaagcaaag
tgttggagatggagcttgtcagggtttgccagggggtactatgcaccattcctgcaaaag
ttacatgtaaagtttgctgtaatagttttatttgcttgtctacttggagccagcatctat
ggagtattcctcattgaggatggactagacctcacagatgtcgtcccaagagggacgcgt
gaggaagactttctccaagtgcaaaacgagtattttagtttttatagtatgtacgcggtg
acggaaaaggactatgattatccgcaccgacagaggcagctctatgcttttcatgatgag
tttcgcaatataccggaagtaatcagggataccgatggatcgttacccactttttggctg
caggatttcagggattggttgatagatatgcaaaaggcttttgatgttgataaggctggc
tattccatccaatataacaagtggtacagcaatgcatcagacaaaggagtccttgcctac
aagatgatggtgcagtctggagaggcagagatcccattcgatctgcaaaggtttcaccac
ggtagactggttgacgacaacggcatcatttacgccggtgccttctaccactatctaaca
gtgtggattaactacgacaccttgtcatatgctgcatctcaaggaaacatccatcctcag
cccagtgcctggcaacctggtggtaaaactgaacatgatttgactataccaagagccaga
gccatcaactacacccagatacctttctacctggacggtctccgggaaaccgaggacttt
gtccgtgtcatcaaaagcgtgcgcaacctgtcatcttattacgcgcaagaaggcctgcca
aatttccctagaggtgtgcccttcacattctgggagcagtatttggatttgaggttctac
ttgggtcttactctagccagtgttcttggagcgagtttcttggtgataaccatcatgttg
gtgaatccgtgggcagctctgattatggtacttgtgctaggcatgattacagtagaactc
tttggttttatgggtctcattggcatcaagttgagcgctattcctgcagtgactcttgtc
atatccgttggcatcggtgtggaattcacgctccatatgtgctacgcgtttttaacatcc
attggtgatcgtgacaaacgtatggctgtagcggtagaacacacattctcacccattgta
gatggcgctctttcgacgctccttggagtgattatgcttgcagggtcagagtttgacttc
attgttagttatttcttccatgtattttctgcattgattgtgattggtttactgaatgga
gtggtgctacttcctgtcctgctctctctgattggtccacctggagaggtaaaactaccc
aatgatgcagacagactaacaacaccaacaccgccaccaacgccagtcatgacacgtgga
tacgacatgcatggaatgccaccacgaccaccaagagggcgtaatacacctcatgcttgg
gatcgcgagtcacagggatcatctcagtcttctgtacgtgatgacgcatatcatcaaggt
tttgccagtgaacatattgaaattcatccgcaagtgtttgttgaaacgacatgtcatgca
ccgtatagtagggaagagcataaatgtaacagaccacaccggaagccgacatcatacaca
cacagaccgacgagggcgccacacagaacgatgcacccacacattccacagtcatatagc
tcttcatcaccttcatcctctccacctcattctcctcatccgtctccaccaccaaggccg
catcactcaccaaaaatatcgcggcatacgacaagaacgaccgttacggcaacggcgcgt
gtatcaattgtgcatggcatggcttgcggggtagagtcgccgagtagcagaagagacaat
tatagatattatagtagaaagaataggaagaatgagaagcaggaagacaagtgcgggttg
ccagagttggagatcaaagattacaactcggattcaaccgtctaa
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