Amphiura filiformis: 140168513
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Entry
140168513 CDS
T10871
Name
(RefSeq) pre-rRNA 2'-O-ribose RNA methyltransferase FTSJ3-like isoform X1
KO
K14857
AdoMet-dependent rRNA methyltransferase SPB1 [EC:2.1.1.-]
Organism
afil Amphiura filiformis
Brite
KEGG Orthology (KO) [BR:
afil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
afil03009
]
140168513
Ribosome biogenesis [BR:
afil03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
140168513
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spb1_C
FtsJ
DUF3381
Methyltransf_23
Motif
Other DBs
NCBI-GeneID:
140168513
NCBI-ProteinID:
XP_072048017
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Position
13:complement(53223262..53258239)
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AA seq
873 aa
AA seq
DB search
MGKKSKVGKQRRDKYYHLAKETGYRSRSAFKLIQLNRKFQFLQKSRVLLDLCAAPGGWLQ
VASKNMPISSLIIGVDLFPIRPIPNVVTIQSDITTEKCRQSLRKELQTWKADAVIHDGAP
NVGTTWVLDAFQQAQLTLVSVKLACEFLNKGGWFVTKVFRSKDYQVLLWVFNQLFKKVHA
TKPQASRNESAEIFVVCQGYLAPDKIDTKFFDPKYIFKEVDLDGPKKMTIFQDPSKQKKA
KAIGYAEGDYLQHTVVKATDYLASETPAEVLNDCSEIVIDDDEIAKNPLTTVELKHCIKD
IKVLGKKEIKLLLTWHKKLNKQRKKEEAKLEPKKEVESSDSEDEEAKIERQLEKLKDEET
AAARRKKKDLLKKRRKLRERLNKALDADIHGGPIEDGESMFELRRIKNKKQLQQLDKGEG
DEAEEEVAAESDSEDSDSDLPSELDEDEAEMLRQDKAKYAQVEGGDDEEDDDIGYPHSDE
EEDQNSAEQNPLMVELDDEDQDVKAQRRTNLWFSKAAFSGLDDDMDEDLEVAQMTKSYKA
RGGQVIENKDDSKSKKRSVRFDTSVTSLNMEGEEDVEDLASPSDDEEESDDGLGSSDDEK
GAQNGAKQVSDSDSDDSDSDYDDEVMLEGYAKANEIEEEEEEDDLRTIKTTKELKKKRKD
GKSRQEAKDGFEIVPAEEPAKKMKRLDPEGLAIGTLMATSKKKRREILEHSYHRFTNGEE
DTLPKWFMEDEIQHRRKQMPVTKELVAEYKARLTEINARPIKKVAEAKARKKMRTNRKME
KLKKKAAAITDTVDMSDREKMQNLKNLYKKAGIKKQQKKVTYVVSKKALAGKRMQRPRGL
KGPYKVVDPRLKKDMRAKKRVDAKNSKKRKRKH
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atggggaaaaaatcaaaggttggaaaacagaggcgagataaatattatcatctagccaaa
gaaacaggttacaggtctcgatctgccttcaagctcatccaattaaatcgcaagtttcag
tttctgcaaaagtctcgtgttctgttggatctgtgtgccgcaccaggaggatggctacaa
gtagcttccaagaacatgcccatatcaagtcttattattggtgtagacttgttcccaatc
agaccaataccaaatgttgtcacaatacaaagtgatatcaccacagagaaatgcagacag
tccttaaggaaagaactacaaacatggaaagctgatgccgtcatacatgatggcgccccc
aatgttggtacgacatgggtgctggatgccttccagcaagctcaactcacactagtatcc
gtcaagcttgcctgtgaattccttaacaaaggaggatggtttgttacaaaggtgttccgt
tccaaggactatcaggttctactctgggtgttcaaccagctctttaagaaagtgcatgcc
accaaaccgcaggcctccagaaatgagtcggctgagatattcgtcgtatgtcagggttac
ctggcacctgataaaatagacaccaagttctttgaccccaagtacatctttaaggaagta
gatttagatggtcctaaaaagatgactatcttccaagacccgagtaaacagaagaaagca
aaagccataggctacgcagagggggactacttacaacatacggttgtcaaggcaacagat
tatctggctagcgaaacaccggctgaagtcctgaatgactgtagtgagattgtaatcgat
gatgatgaaatcgctaaaaacccactgaccaccgtggaactcaaacactgcataaaggac
atcaaggtgctggggaagaaggagattaaactgctgctgacgtggcataagaaactcaac
aaacaacgcaagaaagaagaagcaaaactagaaccaaaaaaagaagttgaatccagtgat
agcgaagatgaagaagccaagattgaaagacaactcgaaaagttgaaagacgaggagaca
gctgctgctaggaggaaaaagaaggatctcttgaagaaacgacgcaagctccgtgagcgt
ctgaataaggctcttgatgcagacatacacggtggtccaatcgaggatggagagtctatg
tttgagttgagaaggatcaagaacaaaaagcaacttcaacaactagataaaggtgaagga
gacgaagctgaggaagaggtcgctgcagagtctgattccgaagacagtgacagcgacttg
cctagtgagcttgacgaggacgaggcagagatgctgcgtcaagacaaggccaaatatgcc
caagtggagggtggagacgatgaagaggatgatgatataggatatcctcattctgatgag
gaagaggatcagaattcagcagagcagaacccattgatggttgagctggacgatgaggat
caggacgttaaagcacaaagaagaactaatctatggtttagtaaggctgctttctctgga
ttagatgatgacatggatgaagacctggaagttgcccagatgactaaatcttacaaggcc
agagggggacaagtaatagaaaacaaagacgactcaaaatccaagaagcgcagcgtccgt
ttcgacaccagcgtcaccagcctgaacatggaaggtgaagaggatgtggaagaccttgca
tcaccaagtgacgacgaagaagaatccgacgatggacttggatcatcggatgacgagaaa
ggcgcccagaatggggccaagcaggtgtccgatagcgacagtgatgacagcgatagtgac
tatgatgatgaagtgatgctagaaggttatgccaaggcaaatgagattgaggaagaagaa
gaggaagatgatttaagaactataaaaaccactaaagagttgaagaagaagaggaaagat
gggaaatcacgacaggaggccaaagacgggtttgagattgtaccagcggaggaaccagct
aagaaaatgaagagattagatccagaaggattggcgataggaacactcatggctacatca
aagaagaagagacgagaaatactggaacattcatatcacagatttacaaacggtgaagag
gatacgttacctaaatggtttatggaagatgaaatacaacacagaagaaaacagatgcct
gttaccaaggaactagttgcagaatacaaggcaaggttgacggaaatcaacgcaagacct
atcaagaaggttgcggaggctaaagcgaggaaaaagatgaggacgaataggaagatggag
aaactgaagaagaaggcagctgctatcacagacacagtggatatgtctgatagagagaag
atgcagaaccttaaaaacttatacaagaaagctggcatcaagaaacaacagaagaaggtc
acgtatgtcgtctccaagaaagcgttggcgggtaaacggatgcagaggcccagaggactg
aaaggaccatataaggtggtagatccaagactcaagaaagatatgagagccaagaagcgt
gtcgatgcaaagaattcaaagaaacgaaagaggaaacattga
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