KEGG   Amphiura filiformis: 140168523
Entry
140168523         CDS       T10871                                 
Name
(RefSeq) lissencephaly-1 homolog
  KO
K16794  platelet-activating factor acetylhydrolase IB subunit alpha
Organism
afil  Amphiura filiformis
Pathway
afil00565  Ether lipid metabolism
afil01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:afil00001]
 09100 Metabolism
  09103 Lipid metabolism
   00565 Ether lipid metabolism
    140168523
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:afil03036]
    140168523
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:afil04147]
    140168523
Chromosome and associated proteins [BR:afil03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    140168523
Exosome [BR:afil04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   140168523
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz EIF3I WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 Beta-prop_WDR75_1st WDR55 Beta-prop_TEP1_2nd Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 Beta-prop_EIPR1 Beta-prop_IFT122_1st WD40_MABP1-WDR62_1st Beta-prop_SCAP NBCH_WD40 Beta-prop_EML Beta-prop_Nup120_160 WDR90_beta-prop_4th Beta-prop_DCAF4 WD40_RFWD3 Beta-prop_DCAF12 LisH_PAC1 Beta-prop_Vps41 Beta-prop_SPT8 Beta-prop_IFT140_1st Beta-prop_RIG_2nd eIF2A Ge1_WD40 LisH Beta-prop_WDR11_2nd Beta-prop_WDR35_TULP_N Beta-prop_WDR19_1st PROPPIN Pox_A_type_inc LisH_2 SutA-RBD
Other DBs
NCBI-GeneID: 140168523
NCBI-ProteinID: XP_072048025
LinkDB
Position
13:53532153..53618813
AA seq 408 aa
MVLSQRQRDELNKAIADYLRSNGYENALAEFHKEADLGGDVEKKYNGLLEKKWTSVIRLQ
KKVMDLESKLNEAEREFHSGGPTRDKRSPTEWIPRPPERYSLQGHRSPITRVVLHPVYSV
VVSSSEDATIKVWDYETGDYERSLKGHTDAVQDVAFDHTGKVLASCSADMTIKLWDFTSY
ECVKTMHGHDHNVSSISFMPSGDFVVSSSRDKTIKMWEVATGYCVKTFAGHREWVRMVKV
NPDGSLLASASNDQTVRVWVVATKECKLELREHDHVVECINWAPENAHTTINEAIGAEIK
KGQRSGPFLISGSRDKTIKMWDVSAGVCIMTLVGHDNWVRGVQFHPGGKFIVSASDDKTL
RIWDYKNKRCQKTLAAHDHFVTSFDFHRSAPFVITGSVDLNVKVWECR
NT seq 1227 nt   +upstreamnt  +downstreamnt
atggtactgtcacagaggcaaagagatgaattgaataaagctatagcagattacctgcga
tcaaatggctatgaaaatgcacttgcagaatttcacaaggaagcagatctgggaggcgac
gtagaaaagaaatataatggtctattagaaaagaaatggacatctgtcatcagattacag
aaaaaggtcatggaccttgaatcaaaactcaatgaagcagaacgagaatttcacagcggc
ggtccgacgcgggataaacgatcgccgacggaatggataccgaggccgccggagaggtat
agtctacaagggcatcggagtccaatcaccagggtagttctgcatcctgtttacagtgta
gtcgtgtcatcttcagaggatgctacaattaaggtttgggactatgaaacaggagattat
gaaaggtcgctaaaaggtcacacagatgccgtgcaagatgtagcattcgatcacacagga
aaagttctagcttcgtgttcagcagacatgacaataaagctatgggacttcacatcctac
gaatgtgtaaagacaatgcacggtcatgatcataatgtatcgtcaattagcttcatgccc
tcgggcgattttgtagtgtctagttcaagagataagaccattaaaatgtgggaagtagca
acaggctattgtgtaaagacatttgccggacacagggaatgggtacgcatggtgaaagtc
aacccggacggctcactactggcaagcgcttccaatgatcagactgtacgtgtctgggtg
gtcgctactaaagagtgcaagctagagctacgagaacacgaccatgtagtagaatgtata
aactgggcaccagagaatgcgcacaccactatcaatgaagcaattggtgctgagataaag
aaaggtcaacgttctgggccatttttgatatccggatcacgagacaagactatcaaaatg
tgggacgttagtgcaggagtatgcataatgacattggttggtcacgataactgggtacga
ggcgttcaatttcatcctggcggcaagtttatagtcagcgcatcggacgacaagacactg
agaatatgggactacaagaacaagcgatgccagaaaacactagcagctcatgatcatttt
gtcacgtcattcgatttccacagatcagcaccatttgtcatcacaggcagcgtggatcta
aatgttaaagtctgggagtgccgttga

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