KEGG   Amphiura filiformis: 140169851
Entry
140169851         CDS       T10871                                 
Name
(RefSeq) DNA-directed RNA polymerases I, II, and III subunit RPABC3-like isoform X1
  KO
K03016  DNA-directed RNA polymerases I, II, and III subunit RPABC3
Organism
afil  Amphiura filiformis
Pathway
afil03020  RNA polymerase
afil03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:afil00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    140169851
  09124 Replication and repair
   03420 Nucleotide excision repair
    140169851
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:afil03021]
    140169851
   03400 DNA repair and recombination proteins [BR:afil03400]
    140169851
Transcription machinery [BR:afil03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     140169851
  RNA polymerase III system
   RNA polymerase III
     140169851
  RNA polymerase I system
   RNA polymerase I
     140169851
DNA repair and recombination proteins [BR:afil03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      140169851
SSDB
Motif
Pfam: RNA_pol_Rpb8 RNA_pol_RpbG
Other DBs
NCBI-GeneID: 140169851
NCBI-ProteinID: XP_072049263
LinkDB
Position
14:complement(23359936..23447325)
AA seq 151 aa
MSGVLFEDIFEVKDIDPEGKKFDRVSRLHCESESFKMDLILDVNTQLYPVDLGEKFRLVL
ATTLREDGCPDDGEYTPIDDGTPSRADTFEYVMYGKVYRIEGDESLTEAATRLSAYISYG
GLLMRIQGDANNLHGVEQDMHVYLLMKKLAF
NT seq 456 nt   +upstreamnt  +downstreamnt
atgtctggggtactttttgaggatatttttgaagtaaaggacatcgatcctgaaggaaag
aagtttgacagagtgtcccgtctccactgtgagagtgagagttttaaaatggacctcatc
ttggacgtgaacacacagttgtacccagttgacttaggcgaaaaattccgtctggttctc
gcaacgacgctgagagaagatggctgcccggatgacggagaatatacaccgatagacgat
ggtacgccgtctagggcggatacgtttgagtatgtgatgtacgggaaggtttatcggatt
gagggagatgaaagcctgacagaagctgcaacaagattatcagcctatatatcctatggt
ggccttctgatgagaatacaaggtgatgccaataaccttcacggtgtggaacaggatatg
cacgtatacctactcatgaagaagctggccttctga

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