Amphiura filiformis: 140170369
Help
Entry
140170369 CDS
T10871
Name
(RefSeq) transcription factor Sox-2-like
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
afil Amphiura filiformis
Brite
KEGG Orthology (KO) [BR:
afil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
afil03000
]
140170369
Transcription factors [BR:
afil03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
140170369
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
SOXp
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
140170369
NCBI-ProteinID:
XP_072049841
LinkDB
All DBs
Position
14:complement(58656575..58660381)
Genome browser
AA seq
337 aa
AA seq
DB search
MYKMMEQTELKPTSLAMGMTMTSPQMISHGSPGSPTSPGGGGGMGQPGSGSNKNMDPSRV
KRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLTEEQKRPFIDEAKRLRAVH
MKEHPAYKYRPRRKTKTLMKKDKYALPGMITAGGGHVQRGLDGSMQGYPHLNGYMNGYPG
MMQEQLSHIQPHTYGGAPGQMTANAGLHPRYDMTGQIYPPMTSSQASYLNAASYSSSPYS
TSHSPVQMHQPPPAVPKSEHQGSGMSSAERAAAIAHASSGGRMPGDSLREMISMYLPGDA
NDPNRNAHHHAAMQQAAAAAAVYPSVSNGSTVPLTHM
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgtacaaaatgatggaacaaactgaactgaagccaacttccctggctatgggtatgact
atgactagcccacaaatgatttcacatgggtcaccagggagtccgacaagtcctggtggt
ggtggtggtatgggtcaacctggcagtggtagcaacaagaacatggacccatcaagagta
aaacgtcccatgaatgcatttatggtatggtcaagaggacagcgccgaaaaatggcacaa
gaaaatccaaagatgcacaattccgagatcagcaaaagattaggcgccgaatggaaactg
ctaactgaagaacagaagcgaccatttattgatgaagctaagcgtctgagagctgttcac
atgaaagagcatcccgcctacaaatatcgtccacgccgtaagaccaagaccctcatgaaa
aaggacaagtatgctttacccggcatgattaccgctggtggaggacatgtgcaaagaggt
ttggatggtagtatgcaggggtatccccatctgaacggctacatgaatggttatccaggt
atgatgcaagagcagttatcacatattcaaccccatacatatggcggtgcacctggtcaa
atgaccgctaatgctggacttcatcctaggtatgacatgaccggacaaatttacccccct
atgacatcgtcccaagcttcgtatctcaacgctgcaagttactcaagttcaccctactca
acgtcacattcgccagtacagatgcaccaaccgccaccggccgtgcccaaatccgagcac
caaggaagcggcatgtccagcgcagaacgagctgcggccatcgcacatgcaagtagcggc
ggaagaatgcccggtgattcccttagagaaatgatcagtatgtatttacctggtgacgca
aatgatcccaacaggaacgcgcatcatcatgccgccatgcaacaagcagcagcagccgcc
gcagtgtatcctagtgtgtcaaacggatcaacagttccgctaacgcatatgtaa
DBGET
integrated database retrieval system
