Amphiura filiformis: 140170944 Help Entry 140170944         CDS       T10871                                  Name (RefSeq) spatacsin-like   KO K19026   spatacsin Organism afil  Amphiura filiformis Brite DNA repair and recombination proteins [BR:afil03400]  Eukaryotic type   DSBR (double strand breaks repair)    HR (homologous recombination)     Other HR factors      140170944 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Spatacsin_C Beta-prop_ELP1_2nd RRF_GI UxuA Motif Other DBs NCBI-GeneID:  140170944 NCBI-ProteinID:  XP_072050240 LinkDB All DBs Position 15:39413803..39492243 Genome browser AA seq 2652 aa AA seqDB search MSASTQEIFQVSIRKLFDLVSPSNIRQACYSVTEGSILYVLDDGDVVAVKIREEKPKVEA HPLITKVNSIHLCTDEKTDGVHHQNSQLVTLNKDNSLSLYQLSEDGGQVHARCIASCSKD NIQEAVTGVSLEENNIHIINTAGHHVYAVIGQYLLQVILDGTTTSSSPIQQVTKLQWNPS EDKVVYGRTENGLIFLLHSSGNIFTKKQLHNWMWSTHWKCRLTEYFGAIYPSFNRNELKS SGPSHVDITPDLQYLIIIFHKSKYGVLKISLNEYFELFSSHFHHAQGLSSTARQHSISEK DDATLDEDEVDTTHGRRSVNQIGAAGNRSWRNLLASTKELVNRKSRVTEKTESVWKVIEE REKLKNWFHNIHGLQPLSKQQPSAVTKRALQQDGQATTALKKRKISAEESQWSRSTTLNT EEENTSKSSYIFKVPKNFRDKSVGGVCISGSSVLVWYRSNEAAPGVGQKYGGVCIIDVAT NSMNAHSFTECTVLAGSHQFNHPPLLISKSDIEVLACNAHQETLVNQLMIYKSASVAESL CLQNSWDHCSIPIHALEVGLRHRQLDTVAFYLKSRENVFHVRQPTASTASSPTAMQPTSP ARTSDLIQLWLAVDLLMTSIRDNIKEPQSRQYSMQLLHLTLGYQTKLIQNAVEGLAVDLL MTSIRDNIKEPQSRQYSMQLLHLTLGYQTKLIQNAVEALGSRQHGVSLESTGPSEEELNE SLRKLMAYVAELRLYLKECPRWLKADKEAVGEDATDGAVDISLPENLCPQGVTASWGGLT PQDLIKDAILNRTLPVLQAYLHKGDTTGSLPSEMSGLISRGLDVVLDALLVADLDTACGM LQNMGYNVNAELKKICLFTANNSLRDFLINHLSQMGEFNKEEEEAIAFVNQLGRLYACRS FEKAKSIALESDKGAWSEQSVPKIPVNTVAQEFLATSIVTGELVSSEAPNCENFNYADIL LDWVKHWDQETRERILIEKLLSAKNKDTPIQFPISQNSLWNYLTTHSEWVHIEQWIESSL SNQQPSGPVGWNPALPKTLGHQVADQLQYCTTYLRERVLNELARRGVFSSAEFSNLRRLV YRLGANNLLFSKPSAIPVIQQEGGASNVQEFNQQFMEYCVKEKLPSVLYLFLDYYKLCQA ENDVINMQLPFVNGQWLEMMLHFRWVARQIADPALMFQASLSNGRLLLRVAQPSVTALLE ANRPIVALASLMYAPGTLSQAMTTMSSEEDKLWKALPISLKEALRPYPKLQAAIFSPHDS DGSGSPQDITVYQLLQGNVAFEPSKLFHWQSTNNTAPKSGKLTEMQHFSQPDLVCQFAYH EDFKFTYYLYQGRPSFAFVAFLASQLREDCTVSRRRISRAYYKAYTTALRHFTNHSIAVA CVAFIEMLGRDSLPLRVDLQAANTVMKYDAEDMPSIRDKMSLEERLISDLMLSLKGSKSN AELIAEKLSTALTRKLQEDQILPYMWEASDTWVLAILYSRLHKLPLPSAFLEQCALYNQW LHFACFAQAHQYPKDQILELVKKFESATVKEHLQDAFENLQYGSGSDRARKKSQRELTRD VRSQFYLKMGVLRRSQSTGSHGSISESSDVSEDLNVSEDYGSLDESFTQADEPIDLDISK VDRDLFAIIFSCNSTAEPWKSLLAHSVLLWQPILALIASCYQDAHIVDCLAIWLLTSMSN QSAASKVTEHMPSLQWHSWTLLELREVITAAVQTGDVTLLVKGFFTFDPECTLNHLLSFC ECFIVKKNFPLARKHLKEFHTDMLKCRRQESLKNIQDPNPGRIQGELEWCQETACQIVEL MFAMCQTNWDIAKLLQLLSDRDFSLIVSRPEPNYNKLHKICQLLEDTTIQLDIMTLLKTK VIHFKKECQKVVEILQKEKMFAKAKEFSELCGLPRDQVVVYQLQCELAETKKSRVWLIVS GRIKFWRSCHSTFKKNQVQGRAAHQFFMSQVSDTATLTLQETVTLLTYAHQWLAKHVAAG SQSYEEEMKELQELEYKMWQWKLKAEVEKVESSNTYSSLFGDVDTSSNSSGKIKDAMFKS KGASEFLYLSSHHLDSSHTPKLTDKKEISALNSILHQLLEHGCIIQAHRLATQFQHPHQD LSIILTCIQLALGKVRPLGLGAEMQVLLRAKSGTPPRMSRRPSQVFETQRRPLMKTMSML SMSSISMDPYDVDEEDEVLKTIQDLCQHCTGNKGCCERILNAYAIAQVLQRSYESIVTSP PFDILKAVFMCGSNERFTLGKTFIKSNGLKDTEVAGFLSGTVIASLQTRTGPRRKESAVA RQALMPEITTDREEFGYMIRLCKDPAILGNRLLEEVNQLAGSENTQNKQVLTMQVELLIR AHDCHTLCCNTEGICNVLRVCRDCSNVLQQAGEFNHLARLLIGVGRYSEMTYIFDTLRTH QQIELLLKRGTKDDKLKVALLDYLKRCDPPDTETYSAVAVKFEMNREIGELVEKTAKENL KSLTKRAMDTNIELQNSLQAVLQDFTKAAEHYAKDNCLRHAERCIKQARLVALQLHLLPM RKKVVNLDTNAVAEFVTQHPKFYEAFIVSNAYRYQTEWSVSIYNNVIDQGDLTYFEEYRA CMPASDSIFREVAMRFKRESSRGSQTTANMKTLLGHCQDVLMAYKIATELDFQDIARGLL EGEAGAYLRDVA NT seq 7959 nt NT seq  +upstreamnt  +downstreamnt atgtcagcctccacacaagaaatttttcaggtttcaatacggaagttgtttgatttagtt tcacccagtaacatcagacaggcatgttacagtgttacggaaggaagtattctgtatgta cttgatgatggtgatgttgttgctgtcaaaataagagaagaaaaaccaaaagttgaagca catccgctgattacaaaagtcaacagtatccacctgtgcactgatgagaagacagatgga gttcatcatcaaaatagccaacttgtaacactcaacaaagataacagcctgagtctctat cagctgtcagaggatggaggacaggttcatgccagatgtattgcatcttgttcaaaagac aacattcaagaagcagtgacaggtgtttccttagaagaaaacaacatccacataatcaat actgctgggcatcatgtgtatgctgtcattggccaatacctgttacaagtcatcttagat ggcacaacaacatcttcgtctccaatacagcaggtgacaaagctacaatggaatccatca gaagacaaagttgtgtatgggaggacagagaatggtttaatattcttgcttcattcatct ggaaatatatttactaagaagcagctccacaactggatgtggtcaacccattggaagtgt agactgacggaatattttggtgcaatatatccttcattcaacagaaatgaactcaagtca tcaggaccttctcacgtagacatcactccagacctacagtacttgataataatattccac aaatcaaagtacggcgtacttaagatatctctcaatgagtactttgagctgttttcatca cattttcatcatgctcaggggctaagttcgactgccaggcaacattctattagtgagaaa gatgatgccaccttagatgaagatgaggttgataccactcacggtagaagatcggtcaat caaatcggagcagctggtaacagatcatggcgaaacttgctcgcatccaccaaggagttg gtcaacagaaagagtagggttaccgaaaagacagagtcagtatggaaagttatcgaagaa cgtgagaaactgaaaaactggttccataatatccatggcctgcaaccactttcaaaacaa caaccaagtgctgttaccaagagagctttacagcaagatggtcaagccacaactgctttg aagaagagaaaaatctcagcagaagaatcccagtggtcacgtagcaccactttgaacaca gaagaagaaaacactagtaaatcgtcatatatcttcaaggttccaaagaatttccgggat aagtctgttggtggtgtgtgcatcagtgggagttcagttttggtctggtatagaagtaac gaagcagcacccggcgtaggacagaaatacgggggagtgtgtatcattgatgtagcaacc aactctatgaacgctcacagcttcaccgaatgcacagtactagcaggaagccatcaattc aaccacccaccactgctgatatcaaagtcggatatagaggtcttagcttgcaatgcacat caagaaaccttggtcaaccagctcatgatatacaagagtgccagtgtagcagaatcacta tgtctacagaatagttgggaccattgctccattcctatccatgctcttgaggttggtctc cgacacagacaacttgatacggtggcattctatttgaagagcagggaaaatgtgttccat gtacgacaacccaccgcctcaacagcttccagccccacagctatgcaacccacatcacct gccaggacctctgacctcatacaactctggttagcagttgacctcttgatgacctctatt agagataatatcaaggaaccacagtccagacaatactcaatgcaattgttgcatctgact ctaggatatcagaccaaactgattcaaaatgctgttgaggggttagcagttgacctcttg atgacctctattagagataatatcaaggaaccacagtcaagacagtactcaatgcagttg ttgcatctcactctaggatatcaaaccaaactgattcaaaatgctgttgaggctttgggc agcagacaacatggagtcagtttggagtctacaggtccctcagaggaggagctgaatgag agtcttaggaaactaatggcttatgtggcagagctcagactgtatctgaaagagtgtcct agatggttgaaggcagacaaagaggcagttggtgaagatgcaactgatggtgcagtggac atatcattgccagagaacctttgtcctcagggagtaacagcatcatggggtggtttgaca ccacaggatctcatcaaagatgctatcttgaatcgcacactgcctgtactacaagcctat ctgcataagggagataccacagggagtttacccagtgagatgagtggcctcatcagcaga ggacttgatgtcgtgttggatgctctactggtagcagatttagacactgcttgtggaatg ctgcaaaacatgggctacaatgtgaatgcagaactgaagaagatatgcttgttcacagca aacaacagtttgagagatttcttgataaaccatctaagccagatgggggaattcaacaag gaagaggaagaagccattgcatttgtgaatcaactaggacgattgtacgcatgccggtca tttgagaaagccaagtcaatagcattggagagtgataaaggggcttggtcagaacaatct gttccaaagattcctgtcaacactgtggctcaagagttcctcgctaccagcattgtgacc ggcgaattagtctcctccgaagcaccaaactgtgagaatttcaactatgcagatatccta ctagactgggtgaaacactgggaccaggagactagggaaaggatactgattgagaaatta ctgtctgccaaaaacaaagatacacccatacaattccctatcagccagaattccctgtgg aattacctgactacacacagtgaatgggtccatatagagcagtggatagaatccagctta tccaatcagcaaccatcaggcccagtaggatggaatccagccctccctaaaacactaggc catcaagtagctgatcaattacagtattgtactacttatctgagggagagagtactgaat gaattagcaaggagaggcgttttcagcagtgcagaattcagcaacctgaggagacttgtg tatcgccttggtgccaacaaccttctgttctccaagccgtctgctatacctgtgatacag caggaaggaggtgcatccaatgtacaagaattcaaccaacaattcatggagtactgtgtc aaggaaaaactaccaagtgttttatacctgttcttggattattacaagttgtgtcaagca gagaatgatgtcatcaatatgcagttgccatttgtgaatggtcaatggttagaaatgatg cttcactttagatgggttgctagacaaatagcagatcctgctttgatgttccaagccagt ctatcgaatggcagattgctgttacgtgtagcccaaccaagtgtgactgccttgctggaa gctaataggcctattgttgctctggccagtcttatgtatgcaccagggactttgtcacag gcaatgaccactatgagttcagaagaagacaaactgtggaaggctcttcctatctccttg aaggaagccttgagaccataccctaagctacaagctgctatattctcaccacatgatagt gatggtagtggttctcctcaagatatcactgtatatcagctcctacagggaaatgttgcc tttgagccttccaaattattccactggcaatcaaccaacaacactgctcccaaatcaggt aaactgacagagatgcagcatttctctcagccagatcttgtgtgtcagtttgcttatcac gaggacttcaaatttacctactatctgtatcaaggacgaccttcatttgcttttgtggct ttccttgccagtcagctacgggaagattgcactgtgtcaagaagaaggatatcgcgtgcc tattacaaagcctacactacagctctgcgtcatttcaccaatcatagtatagctgtggct tgtgttgcctttattgagatgttgggcagagactctctcccactgagggttgatctccag gcagccaatactgttatgaagtatgatgcagaagatatgccatcgataagagacaagatg tcactggaagaaagactcatttcagatcttatgttgagcctgaagggatcaaaaagtaat gctgaactgatagcagaaaagctgtctactgccctcacaagaaaactacaagaagatcag attttaccgtatatgtgggaagcatcagacacctgggtgctagccatcttgtacagtcgt ctgcataagctgcctcttcctagcgccttcttggagcagtgtgccttgtataatcaatgg cttcattttgcatgctttgctcaagctcaccagtatccaaaagatcagattcttgagctt gtgaagaagtttgagtctgccaccgtaaaagaacacctccaggatgcctttgagaatctc cagtatgggtctggcagtgacagagctaggaaaaagtctcaaagagaattgacaagagat gtaaggtcacagttctacctcaaaatgggagtgttgaggagaagccagagcactggcagt catgggagtataagtgagagctctgatgtttctgaggatctaaatgtgagtgaggactac ggatcactggatgaaagcttcactcaagcagatgaaccaatagatttagatataagcaaa gtggatcgagatctgtttgctatcatattttcttgcaactcaactgccgagccatggaag tctttattagctcattcagtgctactatggcaacctattctggcactcatagcatcatgc tatcaggatgcccatattgtggactgcctagcaatctggttattaacgtctatgtccaac caatcagcagcaagcaaggtcaccgagcacatgccaagtctgcaatggcattcctggacc ctactagaactcagagaggtcatcactgctgctgtacagactggagatgttactctgctt gtcaaaggtttcttcacatttgacccggagtgtaccctgaaccatctgctgagtttctgt gaatgttttatcgtcaagaaaaactttcctcttgcaagaaaacatctcaaagaattccac acagatatgttgaagtgtcgtcggcaggaatctctaaagaacatccaggatccaaaccca ggaagaatccagggggagttggaatggtgtcaggaaacagcctgtcagatagtagaacta atgtttgccatgtgccaaactaactgggatattgccaaattacttcagctgttatcagat agggatttctcactcattgtatccagaccagaaccaaactacaacaaactacacaaaatc tgtcagcttctagaggacaccaccatacagctagacatcatgaccttactcaaaacaaaa gtaattcacttcaagaaggaatgccagaaagtagttgaaattctccaaaaggaaaagatg tttgcaaaggctaaggaattctctgaattatgtgggttgcctagagaccaggtggttgtt tatcaactccagtgtgaattagctgaaaccaagaaatctcgggtgtggttgattgttagt ggtcgcatcaaattttggcgtagctgtcacagtacatttaagaagaaccaggtgcaaggt agagcagcccatcagtttttcatgtcacaagtttctgacacagcaactcttacactacaa gaaactgtgacactcctcacctatgctcaccaatggttagccaaacatgttgcagcaggg agtcaaagttacgaggaagagatgaaggaattacaagagctggaatacaagatgtggcag tggaaactcaaggctgaagtggaaaaggttgaatcatccaatacctactcgtctctcttt ggtgatgtagacacatcaagcaactcatcaggcaagataaaggatgcaatgtttaaatct aaaggtgcatcagagttcctttatctgtcatctcatcacctcgactcaagtcacacacca aagctgacagacaagaaggaaatctctgctttgaatagcattctacatcaactcctagaa catggctgcatcatccaggcccatcgcctagcaacccaattccaacatcctcatcaggat ttatccatcatcttgacttgcatacaattagcgctgggcaaagtgagaccattagggttg ggcgctgagatgcaggtgctgttgagagctaaatcgggtacaccaccacggatgagtagg agaccgtctcaggtgtttgaaacgcagaggaggcctctaatgaaaactatgagtatgtta agcatgagcagtatttcaatggatccatacgatgttgatgaggaggatgaagtgttgaag actatccaggatttatgtcagcactgtacgggcaataaaggctgctgtgagaggattctg aatgcatatgccatagcacaggttttacagcgtagctatgaatccattgtgaccagtcca ccatttgatatcttgaaagcagtgtttatgtgcggcagtaatgaaaggtttactctaggc aagacgttcatcaagtcaaatggattgaaagacacagaggtagcaggcttcttatcgggt acagtcatcgctagtctacaaactagaacagggccaagaaggaaagaatctgctgtagca agacaagcattgatgccagagattacaacagacagggaagaatttggttatatgattaga ctctgcaaagacccagctatcctggggaacaggttattggaagaagtcaatcagctggct gggtcggagaatactcagaataaacaagttctaaccatgcaagttgagctactcatccgt gcccatgattgccatacattgtgctgtaatacagagggtatctgtaatgtactgagggta tgcagagattgtagtaatgtgttgcaacaagctggtgaattcaaccatctggctcgtcta cttattggagttggacgttatagcgagatgacctatatatttgacacactgaggacacat caacagattgagttacttctgaagagagggacaaaagatgacaaactgaaagtagctctt ctagactacctgaagagatgtgaccctccagacacagagacgtacagtgccgtagctgtt aaatttgaaatgaatagagaaataggagaactagtggagaaaactgctaaagaaaatctg aaatccctcaccaagagagccatggacacaaatattgagcttcagaacagtctgcaagct gtgcttcaagacttcaccaaagcagctgaacattatgccaaggataattgtttaagacat gctgagcggtgcataaaacaagctcgtcttgtggctctacaactccatctcttacccatg agaaagaaagttgtcaacctggacactaatgctgtggcggagtttgtcactcaacatcca aagttttatgaggccttcatcgtatctaatgcataccgttaccagactgagtggtctgtc agcatctataacaatgtcattgatcaaggtgatctgacttattttgaggagtatagagca tgcatgcctgctagtgattctatcttcagagaggtagccatgagatttaagagagaaagc agcagaggctcccaaacaacggctaacatgaagactttacttggccactgtcaggatgtg ttaatggcctacaagattgcaacagaacttgatttccaagatatagcaaggggattacta gagggagaggcaggcgcttatctcagagatgtggcatag

DBGET integrated database retrieval system