Amphiura filiformis: 140171199
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Entry
140171199 CDS
T10871
Name
(RefSeq) LOW QUALITY PROTEIN: sorting nexin-27-like
KO
K17936
sorting nexin-27
Organism
afil Amphiura filiformis
Brite
KEGG Orthology (KO) [BR:
afil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
afil04131
]
140171199
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
afil04990
]
140171199
Membrane trafficking [BR:
afil04131
]
Protein recycling
Others
Others
140171199
Domain-containing proteins not elsewhere classified [BR:
afil04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
140171199
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PX
PDZ
RA
PDZ_6
SNX17-27-31_F1_FERM
SNX17-31_F2_FERM
RA_2
PDZ_2
SNX17_FERM_C
UBL_UBAC1
WHD
Motif
Other DBs
NCBI-GeneID:
140171199
NCBI-ProteinID:
XP_072050513
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All DBs
Position
15:8123646..8277392
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AA seq
570 aa
AA seq
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MADSGQRTNSDGSPGFEKGNKPRGVTITKSETGFGFNVRGQVSEGGQLKAINGELYAPLQ
HVSAVLEGGAAEKAGIMKGDRILEVNDINVEGATHKFVVDLIKQGGNELTLTVISVPNFK
EDKSDLPSDESSGYSFYDYSERRPMPISIPDYQHVVNHRGDKYVVYNVYMAGRLLCAHRY
SEFSAVHNALKKEYVDFXFPKFPGKWPFNLSEQQLDARRRGLEQYLEKVCSVRVIGDSEA
MRDFLRTEEEEEQAADHGKTTVEMRVLLPDRNTLTVSIRRNNTTPDVYNAVIDKLKMEQE
TAEYFALYEVQEDFERKLAVTEFPHNLYIQNYSTDNNTSCITLRKWVFSPQQELFLNHDE
VAMNFLFWQAIDDVSKGRIQPKDSLYELKMHQEKGNKLQYLKVVRGLDGYGELTFPHCPC
DARKNGHVIPTLTFQQFKLQACTDDGTLEGQVPTFSWEEIRQYETDEEGMAFLFEYAKEG
KKPRWVKIYTKFFEYMHECFQRIEKEIEWTKRNANHNDNQQAQEDEEEEDEDEEEEERAE
AVAAQREKEAASQRAKSKGKVFNTLDDDDL
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atggcggacagtggacagcggacgaactcggatggctcgcctgggtttgagaaagggaat
aaaccccggggagtgacaattaccaaaagtgaaaccggctttggatttaatgtcagagga
caagttagtgaaggaggacagctgaaagctataaatggtgagctgtatgcgccattgcaa
catgtcagtgctgtgttggagggaggggcggctgagaaagccggtatcatgaagggagac
cgtattcttgaagtaaacgacatcaatgtagaaggagcaacacacaaatttgtagtagat
ttgatcaagcaaggaggtaatgaactaacattaacagtcatctcagtgcctaacttcaaa
gaagacaaaagtgatctaccaagtgatgaatcatcaggctactcattttatgattacagt
gagaggcggcctatgcccatatcaatacctgattaccaacatgtagtgaatcatagagga
gataaatatgtagtatacaatgtttatatggcaggtagattactatgtgcacatagatac
tcagaattttcagcagttcacaatgctctgaagaaagaatatgtagatttcnccttcccc
aaattccctggcaaatggcctttcaatttatcagaacaacagctggacgcaaggagaaga
ggattggaacagtatttagaaaaagtttgttctgtgcgagtcataggtgacagtgaggcg
atgagggatttcctccgtacagaggaagaagaggaacaggcagcagatcatggcaaaacc
acagtagaaatgagagtactccttccagatagaaatacattgacagtgagcataagaaga
aataacacaacacctgatgtctacaatgctgtcatagacaagttaaaaatggagcaagaa
actgctgaatactttgccttgtatgaagttcaagaagactttgaaagaaaactagccgtc
acagaattcccgcacaacttgtatatacagaactactcaacagataataacacaagttgc
atcacactacgcaagtgggtcttctcaccgcaacaagaactctttcttaatcacgatgag
gttgcgatgaactttcttttttggcaggcaatagatgatgtaagtaaagggcgtatccaa
cccaaggatagtctatatgaactgaagatgcatcaagagaaaggaaataagctacagtac
ttaaaggtagtacggggtctagacggttacggtgagctgacattcccacattgtccatgc
gatgctagaaagaatggacatgttattcctacattaacatttcaacagttcaaattgcaa
gcatgtacagacgatggcacattagagggacaagtgcccacattctcatgggaagaaatc
agacaatatgagacagacgaggaaggcatggcattcttatttgagtatgccaaggaaggc
aagaaaccaagatgggtgaaaatatacacaaagttttttgaatacatgcatgaatgcttt
cagagaatcgagaaggaaattgagtggaccaagagaaatgccaatcataatgataaccaa
caagctcaagaagatgaagaagaagaagatgaagatgaggaggaagaagaaagagcagaa
gccgtagcagcgcagagggagaaggaggcagccagccaaagagccaaatcaaagggcaaa
gtatttaacacacttgatgatgatgacctgtga
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