Amphiura filiformis: 140171209
Help
Entry
140171209 CDS
T10871
Name
(RefSeq) nucleolar protein 6-like
KO
K14544
U3 small nucleolar RNA-associated protein 22
Organism
afil Amphiura filiformis
Pathway
afil03008
Ribosome biogenesis in eukaryotes
Brite
Ribosome biogenesis [BR:
afil03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
140171209
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
140171209
NCBI-ProteinID:
XP_072050523
LinkDB
All DBs
Position
15:8640687..8682491
Genome browser
AA seq
1152 aa
AA seq
DB search
MVKRGSDSGPVSEGETPTSPTQKKPKVSKEKLYKPPTSEELASLKETQTLYQSSLFKFKM
QELISEVQLPEKKKKTLTSLLHSLNDVLTSLPDQKITDLSDTSWLTKHVKVPLQWAKTQL
KGEVCFQKPSSVKVVGSFLLDTCLYSSLNVDVAVEMPMVCFHQKDYLNFRYHHKRALYVA
YLVKHLRKNKLVDDVQYSLANGDKLRPIVVLKLMDKSAKKVLVRLHPCPSAEAFRETRFL
PSKSNIRRQWYTGQGDEDDTTPTPIYNASILADLNLEKHLHHLYNTSLNFQGFKDGLFLL
KVWLHQRQLDMGTGAFSGFIMSMLVSYLLSERKIHKVMSGYQIMRNTLLYLGNSKWTEKG
ITMCTERNRQDPEFMAQFDKHFDVVFVDSSGCLNLCASMTKETYERVRHEAKLSMDHLDN
KAVDAFDVLFMTPAPFVRKFDHIFHIQDLKQLVKSCKQLQCEDRLMETGEDTVKSSLPGL
MALLRKALGKRVYLLGVRLPQSKQWPITSAPPVASSEDKLTFGLLLNTEFSTSILDKGPA
ANSPEAAAFQQFWGDKSELRRFQDTSICEAVVWPGNTVAEKRLVCQHVVRHILHLHAGID
PVTVTYTGGRMDTLISTQSSVDMSSSSTSSVSTKKDKSKKDRKEQTERTESSLQSGEEEN
VAVIQAYTNLSKCLRKLEGLPLAITSVQGVSPVFRYAEVFPPSTCQTKESRHHDDDHFHV
LVPSSEHKCPKWVPALQVLCQMEGSGQWPDKLDAIQRIRAAFLIRIGELLHTQHDLITLA
TTKFVDVLQDGYVFRVQLSHRKEIGLAKESLTPQGLLVLRDNAQSMELERAIIQLPRLTS
MLHGLQQQYNTYSNTVRLAKRWVCAHLLSRHIRQECVELIVAYVYLQPAPYSVPSSPMSG
FLHFLQLLSTYDWNTSPLIVNLNNELTDGDYDEIKDHFNHHRSQLPKMFIATPMDKLTST
WTKDMPTSQILQRLIVLAKESLQVLETQLNENNQNVDTKQIFRPPLDPYDVIIHLRHKLV
PRLQESIDTPEHLQASVSIAGSSKLRHLPVVNFDPVDCFINDLQAAYGEMALFFHDMHGG
DFVAVLWKPTAFKPQPFKVKHAQGKIPKDSSVDGKDRTMIPNLEAIVEDFKILGQGLVKS
VEVRTHNIEKWM
NT seq
3459 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaacgaggaagtgattcaggccctgtgtctgaaggtgaaacacctacatcacct
acccagaagaaaccaaaggtcagcaaggagaaactgtacaaaccaccaacaagtgaagag
cttgcatcactaaaagaaacgcaaacactttaccagtcaagtttgttcaagtttaagatg
caagagttgatctctgaagtgcagctgcctgaaaaaaagaagaaaacattgactagtctc
ttacacagtctcaacgatgtcctgaccagtcttccagatcagaagataacagatctttca
gatacatcatggctaacaaaacatgtcaaagtgccattgcagtgggcaaagactcagctg
aagggtgaagtgtgcttccagaaaccgtcatcagtcaaagtggttggcagttttcttctt
gacacatgtttgtattcaagccttaatgtggatgttgctgttgaaatgccaatggtgtgc
ttccatcagaaagactaccttaactttcgctaccaccacaagagggcgctgtatgtggca
tacctagtcaaacatctacgcaagaacaaattagttgacgacgttcagtactcattggca
aatggtgacaaattaagacccattgtggtcctgaaattgatggataaatcagccaaaaag
gtattagtgaggttacatccctgtccttctgctgaggcgtttagggaaactaggttccta
cccagtaagagtaatatacgcaggcagtggtacacaggacaaggagatgaagatgacact
acaccaacaccaatctacaatgcttcaatactagctgacctgaatctagagaaacacctg
catcatctctataataccagtctcaatttccagggtttcaaagatggtttattcctcctc
aaggtctggttgcaccagaggcaattggacatgggtacaggtgctttcagtggtttcatc
atgtctatgctggtttcatatttgctgtctgagaggaaaattcacaaggtgatgagcgga
tatcaaattatgcgcaatacattactttatcttgggaatagcaagtggactgagaaaggc
atcaccatgtgtacagagaggaatagacaagatccagagttcatggcgcaatttgataag
cattttgatgttgtatttgttgattcatctggatgtctgaatttatgtgctagtatgacc
aaagaaacatatgaaagggtacgtcatgaagccaagctttccatggatcacctggataac
aaagcagtagatgcttttgatgtattgtttatgacaccagcaccttttgtgaggaaattt
gatcacatttttcacatccaggatctcaaacaacttgtcaagtcttgcaagcagttacaa
tgtgaagacagactaatggaaacaggagaggatacagtgaagtctagtctgccaggtctg
atggcactcttacgcaaagctcttgggaagagagtgtacctcttaggtgttaggttacct
cagagtaagcaatggcccatcacatcggctccaccagtcgcatccagtgaagataaactc
acctttggtctactactcaacacagagttttccaccagcatcttagacaaagggcccgca
gcaaatagtccggaagcagctgcctttcaacagttctggggtgataaatctgagttgcga
cgttttcaggacacatcaatttgtgaggcagtggtatggccaggaaacactgttgcagag
aagcgattagtgtgtcaacatgttgtcagacatatactacacttacatgctggtatagac
ccagtaacagtaacatacacaggtggtcgtatggatactcttatatcaacgcaatcttca
gttgatatgtcatcatcatctaccagctctgtatcaaccaagaaggataagtctaaaaaa
gacagaaaagagcagaccgaaagaacagaatcatctctccaatcgggggaagaagagaat
gttgctgtgatacaagcctacactaatctaagcaagtgcctcaggaaacttgaaggattg
cctttggcaattacatcagtacagggagtctctccagtatttagatatgcagaggttttc
ccgccaagtacatgtcaaaccaaagagtctcgccatcatgatgatgatcattttcatgta
cttgtaccatcatcagaacataaatgtcccaaatgggttcctgcattacaagtgctatgt
cagatggaaggcagtggccaatggccagacaagttggatgctatccaacgcatcagggct
gctttccttataaggataggggaattgctccatacacaacatgatcttatcacattggca
actaccaaatttgtggatgtcctacaggatggctatgtgttccgtgtacaactatcacac
agaaaagagataggattagctaaagagagcttaacaccacagggtctcctagtactgaga
gataatgcccaatcaatggagctagaaagagccatcatccagttaccaagacttactagt
atgctacatggccttcagcagcagtacaatacatacagtaatacagtgaggctagccaag
agatgggtgtgtgctcatctattatcaagacatatcagacaggaatgtgtagaactcatt
gtagcttatgtatatctacaaccagcaccatactcagtaccaagttctcccatgtcaggt
ttcctgcatttcctacagctactcagtacatatgattggaatacttcacctctgattgtc
aatctgaacaatgaactcacagatggagattatgatgaaatcaaggatcatttcaatcat
caccgatcacagctaccaaagatgttcatagctacaccaatggataagctgacttccaca
tggactaaagatatgcctacatcacagatattgcagcgactgattgtccttgctaaagaa
tcactgcaagttttggagacacaactcaatgagaacaatcagaatgtagacaccaagcaa
atattccgtcctccactcgacccctatgatgtcatcatacaccttcgacacaagctggta
cctagattacaggagtctatagatacaccagaacacctccaagcaagtgtgtctatagct
ggtagctctaagctcagacatctaccagtggtgaactttgacccagtggactgcttcatc
aatgatttgcaggcagcatatggggaaatggctctattctttcatgacatgcatggtgga
gattttgtggctgttttgtggaaacctacagctttcaagccacaacccttcaaggtgaaa
catgcacagggtaaaattcccaaggattcttctgtagatgggaaagaccgtaccatgata
ccaaacctggaagccattgtggaagatttcaagattctggggcaaggtctagtgaaatcg
gtagaagtgagaactcacaacatagagaagtggatgtga
DBGET
integrated database retrieval system