Amphiura filiformis: 140171325
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Entry
140171325 CDS
T10871
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 39-like
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
afil Amphiura filiformis
Pathway
afil03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
afil00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
140171325
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
afil03041
]
140171325
Spliceosome [BR:
afil03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
140171325
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Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
140171325
NCBI-ProteinID:
XP_072050666
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Position
15
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AA seq
520 aa
AA seq
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MSIKGHVAGVKRESQKRKIKLVDVSSDESDEEEIVPVKKEPKVDKSRSCPYLDTINRTVL
DFDFEKLCSVSLSHLNVYACLVCGKYFQGRGQKSHAYTHSVQVNHHVFLNLHTLKFYCLP
DNYEIIDSSLEDITYVLKPTFTKQLIRRLERSSKLSRAYDGTTYLPGIVGLNNIKANDYC
NVLLHALAHVTPLRNYFLDENNYINIKLPPGDIMYLLAQRFGELMRKMWNPRNFKAHVSP
HEMLQAVVLCSKKKFQITAQGDPVEFLSWFLNAMHASLGGNRKAGSSYLYKTFQGRMKVY
SRKVLPMDISEKEKKELLKTEEFKETVQDTPFLYLSLDIPSAPLFKDEFEQNIIPQIPLS
SLLAKYDGVTEKEYKTYRDSTVKRFVLTKLPPYLIMCMKRFNKNTFFVEKNPTIVNFPVK
NIDLGEYLSTDKAVRDVHPFTNYDLIANIVHEGEPGAGKGTFKAHVLHKGTGKWYEIQDL
HVADILPQLITLSEAYIQIWELRRTKEEPPPQLNLTTPNS
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgtccatcaaaggtcatgtagcaggtgtgaagcgggagagtcagaagcgcaagattaaa
cttgtagacgtctcttctgatgaaagtgatgaggaggagattgttccagtgaaaaaagag
ccaaaagttgacaaaagcagaagttgtccatatctggataccatcaacaggactgtgtta
gattttgattttgagaagctgtgttcagtgtctctctcccatctgaatgtgtacgcatgt
cttgtgtgtggaaagtatttccaaggtcgtggtcagaagtcgcatgcatacacacacagt
gtacaagtcaaccaccatgtgttccttaatcttcacacactcaagttttactgtttacca
gacaactatgaaatcattgattcgtccttggaggacatcacatatgtactgaagcctacc
tttaccaagcagttaatcaggaggttagagaggagtagtaagttatcccgtgcctatgat
gggacaacatacctgccaggaattgtaggtctcaacaacatcaaagctaatgactactgc
aatgtcttactacatgccttggctcatgtgactccactgagaaattacttcctagatgag
aataactacatcaacatcaagcttcctcctggtgatatcatgtatctcttggctcagaga
tttggagaactcatgagaaagatgtggaatccaaggaacttcaaagctcatgtcagtcct
catgaaatgttacaggcagtggtactgtgcagcaagaagaaattccaaatcactgcacaa
ggcgaccctgttgaattcctctcctggtttcttaatgcgatgcatgcatcattgggagga
aacaggaaagcgggaagcagctacctctacaagacattccaaggccgtatgaaggtctac
tcaaggaaggtcttgcctatggatatatctgagaaagagaagaaagaactgctcaaaaca
gaagagttcaaagaaactgtacaagacaccccattcttgtacctctccttggatatccca
tcagcacctttgtttaaggatgaatttgaacagaacatcatccctcagattccactgtct
tcactactggcaaaatatgatggggtcacagaaaaggaatacaagacctacagagactca
acagtaaagagatttgtgttgaccaagctgccaccatatctcatcatgtgtatgaaacgc
ttcaataagaacacattctttgtggagaagaaccctactattgtcaactttcctgtcaag
aacatagaccttggcgagtacctgtcaacagacaaggctgttagggatgtacatccattt
actaactatgatctgattgccaacatagtacatgagggagaaccaggggctggtaaaggg
accttcaaggctcatgtattgcacaagggtacaggaaaatggtatgagattcaagatcta
cacgtggctgacatccttccacagcttatcacactctcagaagcatatatacagatatgg
gagctacggaggaccaaagaggaaccgccaccacagctgaacctaacaacacctaattca
tga
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