Amphiura filiformis: 140171368
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Entry
140171368 CDS
T10871
Name
(RefSeq) probable ATP-dependent RNA helicase DDX49
KO
K14778
ATP-dependent RNA helicase DDX49/DBP8 [EC:
5.6.2.7
]
Organism
afil Amphiura filiformis
Brite
KEGG Orthology (KO) [BR:
afil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
afil03009
]
140171368
Enzymes [BR:
afil01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
140171368
Ribosome biogenesis [BR:
afil03009
]
Eukaryotic type
90S particles
Helicases
140171368
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
Cas3-like_C_2
P-loop_SecA
AAA_22
Motif
Other DBs
NCBI-GeneID:
140171368
NCBI-ProteinID:
XP_072050708
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Position
15:complement(20093223..20128445)
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AA seq
459 aa
AA seq
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MADMDEDVKSSFASLGLQEWLITQCKSVGINRPSAIQHNCIPPILKGQDCIGCAKTGSGK
TAAFALPIIQKLSEDPYGIYCLVITPTRELAFQIADQFRVLGKPLGLKDCVIVGGFDMVK
QGLELSRKPHVVISTPGRLADHLKSSNTFSLSKIKFLVLDEADRLLEGNFGPDLDVIFDA
VPSKRQTLLFSATITDTMKELKKMSMSKPFFWHSKAPVATVEQLDQRYVLVPAQVKDAYL
IHMLKTFQEEEENKSIMIFTSTCKYCHTLSIMLRELGFPCASLHSMVKQRIRLASLAMFK
SNQVKILVATDVASRGLDIPTVQLVINHNVPTSPKDYIHRVGRTARAGRGGMAITMVTQF
DVKLVYAVEQRINTKLTEYSIEESEVLPILNEVALAKSQAEMKLEELDFGERKAINKRKQ
LIMEGKDPEEELAKEKKEKKRKRRKGPSTSGEASTSKER
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atggctgatatggatgaggacgtaaagtcctcttttgcttcattgggcttgcaggaatgg
ttgataacccagtgtaaatctgtaggaatcaatcgtccatcagctatacaacataattgt
atcccaccaatattaaaaggtcaggattgcatcggatgtgccaagacagggagtgggaag
acggcagcgtttgcactacctatcatacaaaaactgagtgaggatccctatgggatatac
tgccttgtcatcacaccaaccagagagcttgcttttcagatagcagaccaattcagggtg
cttggcaaaccactgggccttaaagactgtgtcattgtaggaggatttgatatggtgaag
caaggattggagttatccagaaaaccgcatgtagtaatctcaacacctggacgcctggca
gatcatctcaagagtagtaacacattcagtttaagcaaaatcaaattcttggtgctagat
gaagctgacaggttgttggaaggtaactttggtcctgatctggatgttatctttgatgct
gtgccatccaagaggcagacactactgtttagtgccaccattactgatacaatgaaggaa
ctcaagaagatgtctatgtctaagccatttttttggcattccaaagcaccagtagccact
gtagagcaattagaccagaggtatgtgttggtgccagctcaagtgaaagatgcctatctc
atccacatgttgaagacatttcaggaggaagaggaaaacaagtcaatcatgatctttact
agcacttgcaaatattgtcacacattatctattatgctgagagaactagggtttccatgt
gcttcactacattccatggtcaaacagagaattcgtcttgcatcactagccatgttcaag
tccaaccaagtgaagattctagtagcaacagatgtggccagtcgagggctggacattcct
acagtgcaattagttattaaccataatgtgcctacatcacccaaagattacatccataga
gtgggcagaacggccagggcaggtcgaggaggaatggctatcaccatggtaacacagttt
gatgtgaaattagtgtatgcagtggagcaaagaataaacaccaaactgactgaatacagt
atagaggaaagtgaggtgctacccatactcaatgaagtggccttagctaaaagtcaggct
gaaatgaaacttgaagagttggactttggtgaaaggaaagccattaacaagagaaagcag
cttattatggagggcaaggaccctgaagaagaattagcaaaagaaaagaaagagaagaaa
aggaaaaggaggaaaggacctagtacatcaggagaagcaagcaccagtaaagagcgatga
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