Amphiura filiformis: 140171447
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Entry
140171447 CDS
T10871
Name
(RefSeq) LOW QUALITY PROTEIN: chondroitin sulfate proteoglycan 4-like
KO
K08115
chondroitin sulfate proteoglycan 4
Organism
afil Amphiura filiformis
Brite
Proteoglycans [BR:
afil00535
]
Cell surface proteoglycans
Others
140171447
Lectins [BR:
afil04091
]
C-Type lectins
Others
140171447
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
140171447
NCBI-ProteinID:
XP_072050809
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Position
15:complement(27545690..27818942)
Genome browser
AA seq
2434 aa
AA seq
DB search
MGGADERTGKIWCILVVLAIVLAAHTPEVRAASFYGTSYIHSPLEQDTYQETDVQFNFKS
SRTKGLLVLLAGTRDYCIIQLKSGYIQVILELAGVDHTIKSPLKEKLNDQRWHKVHVRIA
DNSLYLGIDDHFEREVSLGNPSRSSAFDHGMFVGGTGTLVMNYIEQAGRYFRGCIENIQF
NSIPIVNGTYLHQDVELFETTLGCTSEFEAAPDAAISFVKETAYVVYPRWQVGESGSFAC
WVKTSAPLGLLLYNGEAGESFVAAEIVNGHVRVLLSHGIDRMDFVSQRVINDAMWHWVKI
TISQEDISISIDYEPEIMTFDPAFGEPINLGGNLYVGGVVQKARSEAYASNLRSITDQST
GGSFSGCIRDVEVNDEKQALADSRVTHGIEIGCVYEFPCFQDEPCSPGEACHETGPGSMD
FLCESDYDYDEEEVDQLTTGAPGTTRMQTRAFASTPLRLNEGQRKVINSDNIHLNLDLRA
LNVRESQVLFRIIKRPRHGTMLNDVLRRDDNALEFTLLDLNGNKISYSHDGSENYQDEVM
LTVELLGIENIPSVFRGSPNVTVAIDVTPVNDPPAVILAPNKVLNMIVNTRRPLPIDFLQ
AVDPDNTTSQLSFLVVNQGRNVGQLEFIDIPGRPIYGFTQDEVDQGRVVYAHKGPLYKSR
IVIKLTDGLLTTNLVSFRVDAVPLQLEVVNNSAARLNPRSMVPITSWNLFVSTNDPDGQF
EVVYTITEFPTMGELQLKSELEGDFSWWNAASRFTQEDITRGDLRYFAAKSTIRKALKRD
WVTLTVSCLDESIEDLEFKIEIVLTTVQVVRNTGLTLDIRRQGIIKSSNLSATIEHPLTP
SPIIIYTIVRKPAKGYILMPSYGQLIEGSNFTQIDIDVGLIGYQVDDQVYSPFNDSFLFQ
ISVPNAQSSILRFNISYKPDTETLIVTNKGFTVQEGSAKVITRQDLYLVAGGITDFVYQV
TKRPEHGELQLLDASESVVARHNIKSFLNFDLESGTLQYQHDDSETESDTFTIYAMASYI
APNGIRRTLNYTSSVDITVQMKNDHKPEPTVNKIFPVVRNGKTPLTDKYLKYTDKDIDFD
DVDINFQRQGIPIGDLVSAQNENISVFQFTQRDLNEGNLLFKHKGNSLESRMVFFVFDTD
RSEYNAGFLTIQASDPFIVLDQNTXLKLTHGGSAMITNYNLSVETNMGVKSKKITYTVTV
TPRHGILTVDGFPSSIFTQEDLLASKVQYNHDNTSNMVDSFNFTVQAKNQVADGYFKIRV
FLEGHQRLPEVDHLLKLTLEEGTFAVIDKSHLKVTHTNHLPVELNYQVTASPMHGHLQLI
KDLDETTNFXIGERILRFTQQDVNRGHLYYVQTNTGFDSDKFTFEVSTGFTRIGNLTLPI
DIAPKVVPVEVQSITVLEGASKSITTKVLHIAHSFYQDQQFDYYILQQPSNGLVESSRDS
GEPLEKFSTQDIANEFIYYVHDGSDTTQDSFVVVANSTDGDKSSLPAVIQITIFPINDMS
PELTSSNSILVYVGSTTTITTESLNARDADTEADNLMYTLTTTPTNGFVALKTKPGIPIR
NFTQANVKNKDVIFVHTGARTGGFRFRVSDGIHVTPLGLFTIIAKQLLITVVNNTGLKAA
PGILQPITSENLKVMPTEETQTVLKEPITYQITDGPHHGLIVRIIDNEETGTATFQTLSE
FTQKDIDDGLLGYQLSIDSSASEDSFTFDVILPLSQNLRGQEFAIDVVTADMIETTNMVT
TKPMQTTPTLSPYKIRNKGVEVREGATITITDDRLSAINLLNDLSDEDIETVTIEYEITD
RPSHGYLLLRQRNLTNKAKFTQTDINDIGIKYVHDHTDDRQDGFNFTVRVLANEGSLVSN
SEINPLVYKGEFKIIIDPVNDRMFVVETTSLHMSVVQGTSKIITPEDLRTVDPDNLPSEI
HYQLYGRPSNGKLALTSDPSISVTQFTQEQIDNGDIQFVHDGGKKSGSFVFKITDGASAH
VQIKQFTIEVVSVQLSLHTQEVELPQGDKVVTITNLNLNVTTNGDRDTVRYNITTFPRSG
QIMVNHMPQLSFTQKEIDDNLVQYVQTVIAMNSDLLGFTMYDKYNTVTDLNVTINVQPLI
YLEKLNATTGMYIPITTNYINASELASKTSSDPTFKIHYPPRRGLILNMTSRLAISKFKY
SDIKAAQVIYAADLLELESNVTLQDRFRFEYAATNAQPVEVTFEIEISPRNADYTTQPTT
PTRLRTRGREQPSWNNPNNTIVLPGNPFDSLPTTASANDLEANSDPKTKNVIPQKLNTIV
IIVPIVIIIVIIFIIILIVLWKLNNGKEKGAKTGRESPYPEPDIGPYPGSQPVPVQVGMM
PPVNITSIRPDHRQNGHIPNRIQSPMVPQVTVTALGRPPSPKIFNPVNSLVSLSSNGTAT
MAYQYDSNCEQCENEYMEQCRTASPTLKKSQYWV
NT seq
7305 nt
NT seq
+upstream
nt +downstream
nt
atgggaggagcagacgaaagaacgggcaagatttggtgtattttagttgtgctagcgatc
gtactggcagctcataccccggaagtacgggcagcttccttctatgggaccagctacatt
cactcaccactagaacaagacacataccaagagacagatgtccaattcaatttcaagtca
agtcgtaccaaaggtctactcgttctgctggctggaaccagagactactgcatcatacaa
ctcaaatccggttacatccaggtcatactggaactagctggagtagaccacaccattaaa
tcaccgctaaaagagaagctaaatgatcagagatggcataaggtccatgtacgcatcgca
gataatagtctatatttgggtatagatgatcattttgagcgtgaggtttctcttgggaat
ccatcaagatcatcagcatttgatcatgggatgtttgtaggtggaactgggactctggtg
atgaattatattgagcaagccggacgatacttccgaggttgcatcgagaatatccagttt
aatagtattcctattgtgaatggtacctatttacatcaagatgttgagttatttgagact
acccttggttgcactagcgaatttgaagctgcacctgatgccgctataagctttgtgaaa
gagactgcttatgtggtgtatccaagatggcaggttggtgagtctggctcctttgcatgc
tgggtcaaaacatctgcaccgttgggtcttctgctgtacaatggcgaagcaggagagtca
tttgtcgctgcagagattgttaatggccatgtgagggtgctattgtcacacggcatagat
cggatggattttgtgtctcaacgggtcattaatgacgcgatgtggcattgggttaaaatc
accatcagtcaagaagatattagcatcagtattgactatgaaccagaaatcatgaccttt
gacccagcttttggagaacccatcaaccttggcggtaatctctatgtgggaggcgttgtc
caaaaagcaagatcagaagcttatgccagcaatttgaggtccatcacagatcaatcaaca
ggagggtcgttcagtggatgtatacgtgatgtagaggtgaacgatgagaagcaggcacta
gctgattcaagagttacgcatggcatagagattgggtgcgtctatgagtttccatgcttc
caagacgaaccttgcagtccaggagaagcttgtcatgagaccggtccaggtagtatggac
ttcctctgcgaatccgattacgattacgatgaagaagaggtcgatcaactcacaacaggt
gcaccaggaacaactcgaatgcagactcgtgcattcgcatcaactcctctcagactcaac
gagggtcaacgaaaagtcatcaactctgataacattcaccttaatctggacttgagagct
ttaaatgtcagagaatcacaggtgctgttcagaataatcaagagacccagacacggaacc
atgttgaatgacgttttacgaagggacgacaatgcgttagagtttacgttactagatctg
aacggaaataaaatctcgtattctcacgatggatccgagaattatcaagatgaagtaatg
ttgacagtagagttacttggtatagaaaacatcccatcagtgttcagaggtagccccaat
gtgactgtggcaattgatgtgacccctgtgaacgacccgcctgctgtgatcctggctcca
aacaaagtcttgaatatgatcgtgaataccagacggccgcttcctatcgacttcttgcag
gctgtcgatcctgataacacgaccagtcaactgtcatttctggttgtcaaccaaggtaga
aatgttggtcagcttgaatttatcgacatacccggcagaccgatatatggtttcacacag
gatgaagtagatcaaggacgagtggtatatgcgcacaaaggtcctctgtataaatcaaga
attgtcataaagctgacagatggattgcttacaaccaatttggtgtcattcagagtcgat
gcagtaccattacaattagaagttgtaaacaacagcgcagctagattgaatccaaggtcc
atggtgccaatcacgtcatggaatctatttgtgtctaccaacgatcctgatggtcaattt
gaagttgtttacacgataacagaattccctaccatgggagaacttcaactaaagagtgag
cttgaaggagatttcagctggtggaatgcagccagtcgattcacacaagaggacatcaca
aggggcgatctgcgctattttgccgctaaatccacaatcagaaaagcgcttaagagagat
tgggtaacgttgactgtttcgtgcttggatgaatccatcgaagatctggaattcaagatt
gaaattgtactgactacagttcaagttgttcgcaataccggtcttactttggacattaga
cggcaaggaattatcaaatcttccaatttatcagccaccattgagcatcctctaactcca
tcgcccattattatctataccatagtccgaaaacctgctaagggatatattttgatgcca
tcttacggacagcttatagaaggcagtaattttactcagattgacattgatgtaggacta
atcggctaccaagttgacgaccaagtgtactctcccttcaacgattcctttctctttcaa
atatcagtcccaaacgcacaaagttcaatattgagatttaatatctcctataaaccagac
acagagactttgattgtgacaaataaaggtttcactgtccaagaaggttctgccaaagtg
ataacaaggcaggatctatacttagtcgcaggtggcataacagacttcgtctaccaggtc
accaagagaccagaacatggagagttgcaactgttagatgctagcgaatctgtagtagct
cgtcacaacatcaagtctttcttgaactttgaccttgaaagcgggactttgcagtaccag
catgatgattcggagactgaaagtgacacgttcaccatttacgctatggcgtcgtatatt
gcaccgaacggtattagaagaacattgaactatacaagctcggttgatatcacagtgcaa
atgaagaatgatcacaaaccagaaccaactgtgaataagatcttccctgttgtgagaaat
ggaaagactccgctaacagataaatacctgaaatacacagacaaagacattgattttgac
gatgtggatatcaactttcagcgccaaggaattcccataggagacttagtgtctgctcaa
aatgagaatatcagtgtgttccaatttactcaaagagatttaaatgaaggcaatttgtta
ttcaaacataaaggaaactccctagaatccagaatggtgttttttgtcttcgacactgat
cgcagcgaatacaacgctggtttcttgactatacaagcatctgatccattcatcgtactt
gatcaaaacaccngcctgaaactgactcatggaggatctgctatgattacgaattacaat
cttagtgtagaaactaatatgggagtgaaaagtaagaaaataacgtacacggtgacagta
acaccacgccatggcattctcactgtagatggtttcccatcgtcaatcttcactcaagag
gatctcttagcatctaaggtgcaatataaccatgacaacacatccaatatggtggattct
ttcaattttactgtccaagctaaaaaccaagttgcggacggttatttcaagattcgtgtc
tttttggaaggtcaccaaagacttccggaagttgaccatctgctgaagcttaccctggag
gaaggaacatttgctgttattgataagtctcatctgaaagtgacacacaccaaccatctt
cctgtggagctgaactatcaagtcactgcatcacccatgcatggtcatcttcaactcatc
aaagatcttgatgaaacaaccaactttngaatcggcgaaagaatcttgagattcacccag
caggatgtaaatcgcggacatctgtactacgttcagaccaacaccggctttgattcagat
aaattcacgtttgaagtgtcaacgggattcacaagaataggcaacctgactctaccgata
gacattgcgcctaaagtagtccctgtagaagtgcaaagtattaccgtactagagggcgct
tccaagtccattacgaccaaggtgcttcatattgcacattcattctatcaagatcaacag
tttgactattacatcttgcagcagccgtcaaatgggttggtggagagttcacgtgattca
ggagaaccattagaaaaattcagcacccaagacattgctaacgagttcatctactacgtc
catgatggtagcgacacaacccaagatagctttgttgtggttgctaactccactgatgga
gataaatcaagcttaccagcggtcatccagatcactattttccccatcaacgacatgtct
ccagagttgacgtccagtaacagcattctggtttatgtgggttcaaccacgacaatcaca
acagaatctttgaatgcgagagatgcggacacagaagcagacaacttgatgtatacgtta
acgacaacaccaaccaatggcttcgtggcgttaaagaccaaaccaggcattcctatcaga
aattttacccaggctaacgtgaagaataaagatgttatctttgtacacacaggtgcaaga
accggtggtttccgtttccgagtcagcgacggtatccatgttaccccattgggcctcttc
accatcatcgcaaaacaactcctcatcactgtcgtcaacaacaccggcctcaaagcagca
ccaggaatccttcaaccaatcaccagtgaaaatctcaaagtgatgccaacggaagagaca
cagactgtcttgaaagaaccgataacgtaccaaatcaccgatggtcctcatcatggactg
attgttcgaattattgacaatgaagaaacaggaaccgctacattccagacattgtccgaa
tttactcaaaaggatattgacgacggcctgttgggttatcagctgtcaatagatagctct
gcttctgaagatagtttcacttttgacgtcatcttgcctttatctcagaacttacgcggt
caagagttcgccattgatgttgtcacagccgatatgatcgagacaactaatatggtaacg
acaaagccgatgcagacgacgcccacgttgtcaccatataaaattcgcaataagggggtg
gaggttcgtgaaggggcaactatcaccatcactgatgatcgtttaagtgcaataaacctt
ttgaatgatttatcagatgaagacattgaaaccgtcactatcgagtatgaaattacagat
cgaccatcgcatggttacttgttactacggcaacgcaacttaacgaataaagccaagttc
acacaaacagacataaatgatatcggtatcaaatatgtgcatgatcatacagatgatcgt
caggatggctttaattttacagtaagagtcctagccaatgaaggtagtttagtttctaat
agtgagattaatccgctggtttacaaaggagagttcaaaataatcattgacccagtgaat
gatcgcatgtttgtggtagagactacttctcttcatatgagcgttgttcagggtactagc
aagatcataacaccagaagatcttcggacagttgaccccgacaacctgcctagcgaaatt
cattaccaactatatggcagaccgtccaatggcaagctagcgctcactagcgacccctcc
atatctgtcacacagtttacgcaagaacaaatcgataacggcgacatccagtttgttcat
gatggagggaagaaatcgggaagctttgtgtttaaaattactgatggcgcatcggcacac
gtgcaaattaaacaattcacaattgaagtagtttccgtgcaattatctttgcatactcaa
gaagtggagttgccccaaggtgacaaagttgtaaccatcacaaacttaaatttaaatgtt
acaacaaatggtgacagagataccgtccgatacaacatcacaactttcccacgatctggt
cagattatggtaaatcatatgccgcagctttcgttcacacagaaagagatcgatgacaat
ttggtgcaatatgtgcagaccgtaatagccatgaacagtgatttacttgggtttactatg
tacgataagtacaacacggtgactgatttaaatgtaacaattaatgtgcaaccgcttatt
tatcttgaaaagctcaatgctacaacgggcatgtacatacccattacaaccaattatata
aatgccagtgaacttgccagtaaaactagcagcgatcctactttcaaaatacattatcca
ccgcgacgcgggctaatacttaacatgacgtccagactagctatatcaaaatttaagtat
tcagacatcaaggcagcacaggtgatatacgcagcagatttattagagttagaaagcaac
gtaacacttcaagatcgttttcgatttgaatatgccgcaaccaatgcacagccggtggaa
gtgactttcgagatagaaataagtcccagaaatgctgattacaccacgcagcccactact
cctacacgccttagaacaagggggcgggagcagccatcttggaataatccgaacaataca
atagttctacctggtaatcccttcgattcccttccaacgacagcatctgcaaatgattta
gaagctaatagcgatccaaagactaaaaatgttattccgcaaaaactgaatactatagta
attatagtacctattgtgatcattatcgtcattatctttatcattatactaattgtacta
tggaagctgaataacggaaaagaaaagggggcaaaaactggccgtgaatctccgtatcct
gagccggacattggtccgtatcccggctcgcaaccggtgcctgtccaggtcggtatgatg
ccacctgttaacatcacaagtatacggccagatcatcggcagaacggccatattccaaat
cgcattcaaagtccaatggtgccccaagtgactgtaacagccttaggtcgaccaccgtcg
ccaaaaatcttcaatcctgtcaattctcttgttagtttatcatcgaatggaacggctaca
atggcttatcaatatgacagtaattgtgaacaatgtgaaaatgaatatatggaacagtgt
agaactgctagcccaacactgaaaaagagtcagtactgggtatga
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integrated database retrieval system
