Amphiura filiformis: 140171500
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Entry
140171500 CDS
T10871
Name
(RefSeq) LOW QUALITY PROTEIN: protein fem-1 homolog C-like
KO
K25805
protein fem-1 homolog A/C
Organism
afil Amphiura filiformis
Brite
KEGG Orthology (KO) [BR:
afil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
afil04121
]
140171500
Ubiquitin system [BR:
afil04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
140171500
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank
Ank_2
Ank_4
Ank_3
Ank_5
Ank_KRIT1
ANK_LRRK2
TPR_NPHP3
TPR_12
TPR_10
Shigella_OspC
Motif
Other DBs
NCBI-GeneID:
140171500
NCBI-ProteinID:
XP_072050870
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All DBs
Position
15:complement(30151739..30154183)
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AA seq
640 aa
AA seq
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MAKPTAIIPPWSSSVKAPEYYKTHVFNAAREGKLPRIKECLSSFSKEEVSWLLSQTVENT
TALIAACRHGHVEIVNYFIEQCKADVEQVGSVTFDGETIDGAPPLWCAAAAGHFMTVQTL
IKHGARVNHTTFSNSTPLXTACFDGHFEIVKYLVNHGADIELANRHGHTCLMISCYKGHY
KIAEYLLQLGADVNRKSIRGNTALHDCAESGSLEIMKLLLKNGAKMDVDAYGMTPLKAAA
VAGHTNIVDYLITQPDIPRFEKIDALELIGATFVDKRRDTHLALKYWTKAMEERYRDPCN
VVRKKRTDDPVAAYEFSTEVENSKDLDNLIGDPDEMRMQALLIRERILGPSHPDTTYYIR
YRGAVYADSGNFDRCILLWMYALDMQQQALEPLNPMTQSSLLSFAELFAYMLSERNGTRV
YDDKVPYSTVSVVYLKGINEIERGLANQVYGPLAEKEVINFNRALLIIMHLMCLIARLEG
GSEEEEDEVKCATYRFLKLKPYGNRGFGPLHLAVDKSTSSVGRYPVCSFPDVHVVQLLLE
CGANVSDKDFDGNTPLHIAAVNTTKTERGDIMKVLLKHGGHIDARNTAGKVPMELVKGEC
DISPINYTTLQCLAARIIVQYQIPYKNTIPRKLEEFLSAH
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagcctacagcaataataccaccatggtcgtcatctgttaaagcgcctgagtat
tacaaaactcatgtttttaacgctgctcgtgaaggtaaattgccccgtataaaagaatgc
ctatcgtctttttcaaaggaggaagtgagttggctactatcacaaacagtagaaaataca
acagcattgatagcagcatgccgtcatggacatgtagaaattgtgaattattttattgag
caatgcaaagctgatgtagaacaggttggttcagtaacttttgatggtgaaacaatagat
ggtgctccgccattgtggtgtgcagcagctgcgggacatttcatgacagtgcagacactt
atcaagcatggggctagagtaaaccataccacattttccaattcaacgccacttnngacg
gcttgttttgatggtcattttgagattgtcaagtatctcgttaaccatggagcggacatt
gaattggccaatcgccatggccacacgtgccttatgatttcgtgttacaaggggcattac
aaaattgcagaatatcttcttcagttaggggcagatgtgaacagaaaaagtatacgagga
aataccgctcttcatgattgtgccgaatcagggagtttagaaataatgaaattactgttg
aaaaatggtgccaaaatggatgttgatgcatatggaatgacccccctgaaagcagcagcg
gttgcaggacacacaaacatagttgactatcttataacacaaccagacatacctaggttt
gagaaaattgatgcattagaattaattggtgcaacctttgtagataagagacgagataca
cacctcgctctaaaatactggacaaaagcaatggaagaacgttatagggatccgtgcaat
gttgtccggaaaaagagaacggatgacccagttgcagcttacgaattttcaacagaagtg
gaaaattccaaggacttagataatttgataggcgatccagacgagatgcgaatgcaagcg
cttctaatacgggagagaatccttgggccgtcacatccagataccacatactacatcaga
tatcgaggagccgtctatgccgattcaggcaattttgatcgttgtatcttgctatggatg
tatgctctggatatgcagcagcaagcattagaacctcttaacccgatgacacagagcagt
ctactgtcctttgcagagttattcgcgtacatgttgtcagagcgcaatggtacacgggtc
tatgatgacaaagtcccatatagtactgtgtctgttgtgtatctgaaagggatcaacgag
attgagcgtggtcttgccaatcaagtgtatggcccattggcagagaaagaggtgattaac
ttcaatagagcattgttgataatcatgcatctcatgtgcctaatagctcgcttggaaggt
gggagtgaagaggaagaagatgaggtcaaatgtgccacttacaggttcctcaaactgaag
ccttacggaaatcggggctttggtccgcttcatcttgctgttgacaaaagcacatcctcg
gtggggcgctatccagtgtgttctttcccagatgtacacgtcgtacaactcctgctggaa
tgtggtgcaaatgtctcggataaagactttgatgggaatacccctcttcacatagcagca
gtgaacacgacaaagactgaaagaggcgacattatgaaagtgttgctcaaacacggaggg
catatagatgctcgtaacactgctggtaaagttccaatggaactagttaaaggagagtgt
gatatatcgccaataaactatacaactttgcagtgtcttgcagccagaataatcgtccag
taccaaatcccgtataagaacacaatacctaggaaactagaagagtttttgtcagcacac
tga
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