Amphiura filiformis: 140171758
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Entry
140171758 CDS
T10871
Name
(RefSeq) DNA polymerase beta-like
KO
K02330
DNA polymerase beta [EC:
2.7.7.7
4.2.99.-]
Organism
afil Amphiura filiformis
Pathway
afil03410
Base excision repair
Brite
Enzymes [BR:
afil01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
140171758
DNA repair and recombination proteins [BR:
afil03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
140171758
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
140171758
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B_palm
DNA_pol_B_thumb
DNA_pol_lambd_f
HHH_8
HHH_5
NTP_transf_2
Cdd1
Motif
Other DBs
NCBI-GeneID:
140171758
NCBI-ProteinID:
XP_072051179
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Position
15:48606134..48618322
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AA seq
337 aa
AA seq
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MSKRKAPQNENPNTGIVDFLTELANYEKNVTRAMHKYNAYRKAASTVAKHPTALKSGAEA
KKLDGVGVQIAKKIDEFLATGKLQKLEKIRGDDTSTAINLLTRVTGIGPAAARKFVEDGI
MTIDDLKKNEDKLNHHQKIGLRYFEDFEKRIPRAEMTQLEEKIKSEINSMDPEYTATICG
SYRRGAASSGDIDILLTHPTFTEKDVKKPELLKYVVTQLEECGLVTDQLSMGDTKFMGVC
RLEKEDDDEPDFLFRRIDIRLIPCDQYHCGTLYFTGSDMFNKNMRGKALEEGYTLNEYCI
KPLGSTGVPGEPLPVSSEEDVFDYIGMDYKKPSERNM
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaacgtaaggcacctcaaaatgaaaatcctaacactggaattgtggatttcttg
acagaactggcaaattatgagaagaatgtaactcgtgcgatgcacaaatataatgcatat
cggaaagctgcaagcacagttgcaaaacatccaacagcattgaaaagtggagctgaagct
aaaaaactggatggtgtaggtgtccagattgccaagaagattgatgaattccttgctacc
ggaaagttgcagaaattagagaagatacgaggagatgataccagcacagctataaatcta
cttactagagtcactggcattggacctgctgctgcaagaaagtttgtagaagatggcata
atgacaattgatgatctcaagaagaatgaagataaactgaaccaccatcaaaagatagga
ttgaggtattttgaagactttgagaagcgaattcccagggctgaaatgacacaacttgag
gaaaaaatcaaaagcgagattaatagcatggaccctgagtacacggccaccatctgtggt
agttacaggagaggtgcagcatctagtggggatattgatatactactcactcatcctaca
tttactgaaaaagatgtgaagaagccagaactgttgaaatatgttgtgacgcagctggaa
gagtgtgggctagtcacagatcaactctctatgggagacacaaagtttatgggtgtgtgc
aggttggaaaaggaagatgacgatgaacccgactttttattcagaaggattgacatccgt
ctcattccgtgtgaccaatatcattgtgggacactgtacttcacaggcagtgatatgttc
aataaaaacatgagaggcaaagctttggaggaagggtatacactcaatgagtactgcatc
aaaccactaggaagcacaggtgtaccaggggaaccactacctgtatcttcagaggaagat
gtttttgactacattggaatggactataagaaaccttcagagagaaatatgtaa
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