Amphiura filiformis: 140171825
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Entry
140171825 CDS
T10871
Name
(RefSeq) LOW QUALITY PROTEIN: protein bicaudal C homolog 1-like
KO
K18756
protein bicaudal C
Organism
afil Amphiura filiformis
Brite
Messenger RNA biogenesis [BR:
afil03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
140171825
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NCBI-GeneID:
140171825
NCBI-ProteinID:
XP_072051259
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Position
15:complement(52273717..52407891)
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AA seq
1275 aa
AA seq
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MADLFDTDPELRVLDNNVAGLSNNINNGCSSPGDEEVETLPGSSAGAMQQDEPQEEAGTN
EVMMTVCDPDHTEERFRVDRKKLEQMLQAQGGSETGEEFFQRIMEETETHISWPSKLKIG
AKSKKDPHIKVTGKPGNVASAKDKIMSVLDTKSNRVTLKMDVSYTEHSHVIGKGGNIIKK
VMEDTGCHINFPDSNRGKKKKKSNQVSIAGQVCGVEKARFKIRELLPLVLFFELPITCTP
MPDMNSPTIQQIVQSYNVSVNMKQRSRGYSTTVTVRGASNNAAGLKEGTLRLMEHLTGSL
GVTLPVSTQIEIAPQHHQFMIGRGGLNIKQIMQGTGATIHFPDPNNAQRKSSVFVSGSID
SVIIARHLLMGCLPLVLMFDIKEDVEVESSKLAQMMEQLDVFISVKPKPKQPSKSVIVKS
IERNAPNMYLARQKLLGQECESCAAHHAGNHGRGLNGTTLPLTGLNVGSIGMLGQGGLNI
NTANILRINGHNGLSAVPNASHSPAATSATAQWMGTSSTAAIQQGLQSTVPPVLMQQAAI
NSLLRPPTNPLQVNQTTAGLIPSIPTTLTPTISTSLTPGLTTTSVTPGLPPCTTPSIVPT
PTLATSLSTPLHSTALSPSPAPAQASFASALASTVSRHTATSQIPSVVHVTSALQNLTPL
ASLTSGVAPHLTMMSQQTSPSTQSIRQAPTPVSCISATMPEGVMPPTSKLATRVTPAALP
TTSPPSMPTGFIPTSIPPPLLPPPKSTSVTQLQHMQAAAMSLAQQNTVHKPSPPPGFFPR
PDPAAVSAQLAQLDMGRVNTAALLHNNSNVDSSMRHSAFVRVSRQLKDSGGSHSNTSSSC
SPTSSPSNSPIDLIATSTTSPLNHLCNNNNKMDMMTKTISATTLIELLSRNNSISPNNSG
NFASVFGGNGLIEQISPSNSGNFASRLGQHISPSNSGNFSSLFGSGGGVQQDQNGLNRSG
SRPSSESGGESDSSDKRAPGCERRTREKERERQWEREREIEQHRQQELDGLMQDDAAVTY
EQKKLMANKAMKQKPVVSQPRTPTDTWSGLGFSKSMPESAIREARQKNGFSLFQRSALPT
MHESSITEEEGLVENESSWPPDRTSSDAQPASPTSGEFNPTHRKKKYNPYDPLSRSNYID
STSLPRYTKGLWSNGDMDINNSSKKDDKQDLSELFIKLGLSKYTNVFQQQEIDLATFSTL
TDSDLKELGISTFGARRKMLLAISDLNKNQANSFQLNGTNGSAFGDQTSNNHYNSNQRGR
FMNPARVNETAASCW
NT seq
3828 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccttttcgacacggatccagaattacgggttctcgataataatgtagctgga
ttgagtaacaatatcaacaacggctgttcgagtcctggcgatgaagaagtggaaactttg
ccgggatcgtcagcgggcgcgatgcagcaggacgaaccgcaggaggaagcgggcaccaat
gaggtgatgatgacggtgtgtgaccccgatcacacagaggaaagatttcgagttgatcgt
aaaaaactagagcaaatgttacaagcacaagggggttcagaaacgggggaagaattcttt
caacggattatggaagaaactgaaacacatatttcatggccttccaaattaaaaattggt
gctaaatccaagaaagatccccatattaaagtcacagggaaaccagggaatgtggcatct
gctaaagacaaaatcatgtcagttttagacacaaagagcaatagagtaaccttaaaaatg
gacgtctcctacacagagcactcgcatgtgattggaaaaggaggaaatattattaagaaa
gtaatggaagacaccggatgtcatataaatttcccggattcgaacaggggtaaaaaaaaa
aaaaaaagtaaccaagtatctattgctggacaggtgtgtggggtggagaaagccagattt
aaaataagggaattacttcctctggtgctattctttgagcttcccataacatgcaccccc
atgccagatatgaactctcccaccatccaacaaattgtacaatcatataatgtgtcggtc
aacatgaagcagagatcacgggggtattcaactacggtgacagtgcgaggggctagcaat
aatgctgcagggttgaaggaaggaacgctgaggctaatggaacatttgacagggagttta
ggggtaactctaccagtgagcacacagattgaaatagccccgcaacatcaccaatttatg
attggtaggggtggtctcaacatcaagcagatcatgcaaggcacaggggctaccatacac
ttcccagatccaaataatgcccaaagaaaaagctcagtgtttgtctcgggatccattgat
tccgtgattatcgcaagacatttattgatgggttgtttacctctggtgctcatgtttgat
attaaagaagatgtagaagtggagtcctccaaattggctcagatgatggaacagttggat
gtatttattagtgtaaaaccaaaacctaaacaacctagtaagtctgtaattgtcaaaagc
attgaaagaaatgcgccaaatatgtacctagcgaggcaaaaactacttggacaggagtgt
gagagctgtgctgcacatcatgcagggaaccatggtcgaggacttaatgggacgacactg
ccactcacagggcttaacgttggctcaataggtatgttaggccaaggtggtcttaacata
aacacagctaacatactgagaattaatggacataatggtcttagtgctgtacctaatgct
tcacatagtccagcagcaaccagtgcaacagcacaatggatgggtacatcaagtacagca
gcaattcagcaaggtttacaatccacagttccaccagtattaatgcaacaggcagctatt
aattctctccttcgtccgcccaccaatcctctacaagtaaaccaaactacagctggtctc
ataccatctataccaacaacgctcacccctaccatatcgacatccctcacccctggactc
actacaacatcagtaaccccaggtttgcctccatgcaccaccccaagcatagtacccacc
cctacgttggcaacttcactatcaacaccattgcattcaaccgctttgagtccaagccca
gctcctgctcaggcatcatttgcatcagctttagcgtcaacggtttcaaggcatacagca
acctcacagataccaagtgttgttcatgtgacaagtgctcttcagaacttgacgccactg
gcatctttgaccagcggtgtcgcaccccatctgacaatgatgtcacaacagacatcgcca
tctacacagagtatacgacaggctcctacaccagtatcttgtatcagtgcaacaatgcca
gagggtgttatgccaccaacatcaaaactggcaacaagggtcactccagcagcactgccc
accactagccctccatcaatgccaacaggatttataccaacatcaattcctccgccattg
ttgccgccacccaaatcaacatcagtcacccagcttcaacacatgcaagcagcagcaatg
tcattagcacagcagaacactgtccacaagccgtccccgccacctggattcttcccgaga
ccagacccggctgctgtgtcagcacagttggcacaattggacatggggcgtgttaacact
gctgcattattacataacaatagtaacgtggactcatcaatgagacatagtgcctttgtg
agagtatctagacaattaaaagattcaggaggcagtcatagcaacaccagcagtagttgt
agcccaacttccagtcccagcaacagcccaattgacctcatcgccacatcaacgacctca
cccctcaaccatctatgtaacaataacaacaaaatggacatgatgactaaaacaatctca
gcaactaccttaatagagcttctatcaaggaataacagtatttcacccaataatagcgga
aattttgcctctgtgtttggaggtaatggactcattgagcagatctcgcctagtaatagt
ggaaattttgcatctcggttgggacagcatatttcaccaagcaacagcggtaacttttcg
tcgttgtttggatccggtggaggtgtgcaacaagatcagaatggtttgaatagatctggc
agtagaccttcatcagagtctggaggcgagtcagatagttctgacaaaagagcccctggt
tgcgaaaggagaacacgagaaaaggaacgggaaaggcagtgggaaagggaacgagaaata
gagcaacacaggcagcaagaactggatggcctgatgcaggatgatgctgctgttacctat
gagcagaagaaactgatggcaaataaagctatgaaacaaaagccagtagtgagtcagcca
aggacaccaacagatacttggagtggtctaggtttctctaaatccatgccagagtcagcc
atcagggaagcgagacaaaagaacgggttctcattgtttcagagatctgcactacctaca
atgcatgagtccagtataacagaggaagaaggattagttgagaatgaaagcagctggccc
cctgacaggacgtcctctgatgctcaaccagcctcgccaacatcaggagagtttaaccca
acacacagaaagaaaaaatataatccatacgacccactgagccgtagtaactacatagac
agtacgtcgttaccacggtatactaaaggcctctggtcaaacggggacatggatatcaat
aacagcagtaaaaaggatgataaacaagatttgtccgagttattcatcaaacttggtctc
agcaaatataccaatgtctttcaacagcaagagattgaccttgcgaccttttcaacgctc
acagacagcgatttgaaggagctaggtataagcacttttggagctagaaggaaaatgttg
ttagcaatatcagatttaaacaaaaatcaagcaaattcattccaattgaatggaaccaat
ggctcagcctttggcgatcaaacaagtaacaatcattacaacagtaaccaaagagggcgc
ttcatgaatccagcacgggtcaacgaaactgcggctagctgctggtaa
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