Amphiura filiformis: 140172014
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Entry
140172014 CDS
T10871
Name
(RefSeq) LOW QUALITY PROTEIN: vacuolar protein sorting-associated protein 45-like
KO
K12479
vacuolar protein sorting-associated protein 45
Organism
afil Amphiura filiformis
Pathway
afil04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
afil00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
140172014
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
afil04131
]
140172014
Membrane trafficking [BR:
afil04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
140172014
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec1
4HB_MCP_1
Motif
Other DBs
NCBI-GeneID:
140172014
NCBI-ProteinID:
XP_072051462
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All DBs
Position
15:49591888..49630299
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AA seq
541 aa
AA seq
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MNVILAVKQYIAKMIEESGPGMKVLLMDKDTISYVSMVYAQSEILQKEVYLFELLGSSAR
EVMKHLRCICFIRPTRENIDLLSQELKNPKYGVYFIYFSNVVSKSDVKTLAEADEQEVVR
EVQEFYGDYIAVSPHVFSFNIVGAARGQTWNAGIQNRVCAGLTAVLLSLKKCPMIRYQNS
SEMAKKLAENVKQVISKDAGLFDFRRTDVAPLLLVLDRRGDAVTPLLNQWTYQAMVHEIL
GIRNNRXDLSNVPGXSKDLQEVVLSAEQDEFYANNLYNNFGEIGAKIKDLMEDFQKKSQS
QKKIESIADMKAFVENYPQFKKMSGTVAKHVTVVGELSRLVGQHNLLEVSEVEQELACQS
DHNEALKRIRALLSNTKVQNIDACRLVALYGLRYERHSNNNFVGLMQALAHRGVSDKHRK
LVQAIVDYGGERNRGTDLFGQDNPISKTKKFFKGLKGVENIYTQHRPYLQELIDQLIKGK
LREGSYPYLGSNQLRDRPQDILVFVIGGITYEEAFAVHQINKAMPGVRVTLGGTTVHNFE
S
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtgatattagcggtaaagcagtatatcgctaaaatgatcgaagagagtggacct
ggtatgaaggtcttgctcatggataaagatacgatcagttatgtgagtatggtgtatgcc
caatctgaaattctacagaaagaagtctacctttttgaactcctcggttccagtgcgagg
gaagttatgaagcatctgagatgcatctgtttcatccggcccacaagggaaaacatagat
ttgctgtcacaagagttgaagaaccccaaatatggagtgtattttatttatttcagtaat
gttgtgagcaaaagtgatgtgaaaactttagcggaggcagatgaacaagaagtagtgaga
gaagtacaagaattttatggtgattatattgctgtcagtccacatgtattttcattcaat
atagtcggcgcggctaggggtcaaacatggaatgccggaattcagaacagagtttgtgca
ggcctgacagcagtattactatctctcaagaaatgtccaatgattagatatcaaaactca
tcagaaatggccaagaaactagctgagaatgtcaagcaagtgatctctaaagatgcaggt
ttatttgacttccgaaggacagatgtagcaccattattgctagtattagacagacgaggt
gatgccgtcacaccgttactcaaccagtggacttaccaagcaatggtccatgagatacta
ggcatcagaaacaatcgantagacctgtccaatgttcctggantttccaaagatttacaa
gaagttgtgctgtcagctgaacaagatgaattctacgctaataatttatacaataatttt
ggcgagataggtgccaagattaaggatttgatggaggacttccagaagaaatcacagagt
cagaagaagattgaatccattgcagatatgaaggcgtttgtagagaattacccccaattc
aagaagatgtccggtacagttgctaagcatgtgacagtagtaggggaactctcaagacta
gtaggtcaacataatctgttggaagtatctgaggtggaacaagaacttgcctgtcaatca
gaccacaatgaagcacttaagaggataagagctcttctttccaataccaaagtccagaac
atagatgcatgtcgacttgtggccctctatggcttgagatatgagaggcacagtaacaac
aactttgtaggcttaatgcaggcattggcacatagaggtgtcagcgataaacataggaag
cttgtacaagccattgtagattatggtggtgagagaaacagaggtacagacttatttggg
caggataatcccatctcaaaaaccaagaaattcttcaagggtctcaagggtgttgagaat
atttacacacagcatagaccatacctacaagagcttatagatcaactcatcaagggcaag
ctgagggaaggaagctacccgtatctgggatcaaatcaactcagagatagaccgcaagat
atccttgtatttgtgattggtggtatcacatatgaagaagccttcgctgtacatcagatc
aacaaagcgatgcctggagtcagagtcactctgggtggcacaacggtgcataattttgaa
tcgtaa
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