Acidithiobacillus ferridurans: AFERRID_00370
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Entry
AFERRID_00370 CDS
T05847
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
afj
Acidithiobacillus ferridurans
Brite
KEGG Orthology (KO) [BR:
afj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
afj03032
]
AFERRID_00370
03400 DNA repair and recombination proteins [BR:
afj03400
]
AFERRID_00370
Enzymes [BR:
afj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
AFERRID_00370
DNA replication proteins [BR:
afj03032
]
Prokaryotic type
DNA Topoisomerases
AFERRID_00370
DNA repair and recombination proteins [BR:
afj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AFERRID_00370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Zn_ribbon_IS1595
Zn_ribbon_TFIIB
Zn_ribbon_10
Motif
Other DBs
NCBI-ProteinID:
BBF63819
UniProt:
A0A2Z6IEU6
LinkDB
All DBs
Position
complement(34352..36391)
Genome browser
AA seq
679 aa
AA seq
DB search
MNLLIVESPTKAKHIQHFLGSDWQVKASLGHVRDLEKSGDKSHVRPPDFKMNYAVNDAKH
KDIVAGLKSAARNASAVYLATDPDREGEAISWHLCQVLGIKSAEARRVTYQEVTESAVKK
AIANPRALNMKLVAAQEVRRGLDRMVGWEVSGPLSNLIHTKASAGRVQTPALRLIVERER
AIQAFKPRSYFQVIAHLPGSTPGTTWRALWQDGTKEGKYFQDKALAAALAAAIPSLPLTV
TQADSKPTRKAPAPPFTTSTLQMDGSRALKCGAEDVMKAAQSLFEDGHITYHRTDSPNLS
EEGETLLRNALQSAGLPIIGQPRRWKAKGDAQEAHEAIRPTFDKVPPSAEVAGEDAIQQA
LYALIRKRAMASQMPDAVYQQTSCTLNGGTFQNRPAIFRAVGSILTDPGWRTLYMETEEG
EEEGGAEKEAANPVPVLQVGVRAQAERGEVLNKSTKAPPRFTEATLIKALEDHGVGRPST
YASIIKVLYSREYMQRKGKASALYPTATGESVIDALVGRFAFADLDWTREMEDGLDQITN
GVGNARGLLQQAWDAIQQGLAGMPAGAVAETEQCPVDDCGGQVKRLESTKKPGSFFWACS
NRDKHGLLQDDEGHPGLPFADRPQAESQGTGPQCPKCKQATGQFTTSTSKIYFRCQKCSG
AWWPDKENAQALGTKWKKQ
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgaatttactgatcgtcgaatcacccaccaaagccaagcacatccagcactttctggga
tccgactggcaggttaaagccagtctggggcatgttcgtgatctggagaaatccggcgat
aaaagccatgtccgtccgccggacttcaagatgaactatgccgtgaatgatgccaagcac
aaagatattgtggccgggctgaaatccgcagcacgcaatgccagtgcggtgtacctggcc
accgaccccgaccgtgagggcgaagccattagctggcatctctgtcaggtgctcggcatc
aaatcggccgaagcgcgccgggtgacgtatcaggaggtcacggaaagtgccgtcaaaaag
gccatcgcaaatccccgggcactgaatatgaagctggtcgcggcccaggaagtgcggcgc
ggtctggatcgcatggtcggctgggaagtctccggccccttatcgaacctgatccacacc
aaagccagcgccgggcgtgtccagactccggctttacgcttgatcgtggagcgcgagcgc
gccatccaggccttcaaaccgaggtcttattttcaggtcatagcccatctgccgggaagc
acacctggcacgacttggcgggcactttggcaggacggcaccaaagaaggcaaatatttt
caggacaaggctctcgcagcagcgctggccgctgccataccctctcttccccttacggtc
acccaggcggattccaagccaacccgtaaggcgcctgcaccaccattcaccacaagcacg
ctacagatggacggcagtcgcgctttgaaatgcggcgctgaggacgtcatgaaagccgcc
cagtcgctgtttgaagacggacatattacctaccatcgcaccgattcgccgaatctcagc
gaagaaggcgagacacttttgcgcaatgcactgcaatccgccggcctgcccatcattgga
cagccccggcgctggaaagccaaaggcgacgcgcaggaagcccatgaagccatccgcccg
acctttgacaaggtaccaccgtcagcagaagtggccggtgaggatgccatccagcaggca
ctttatgccttgatccgcaaacgcgccatggccagccagatgcccgatgccgtgtatcag
caaacgtcatgcaccctgaatggcggcacatttcagaaccggcccgctattttccgcgcc
gtcggcagcattctgacggatcccggttggcggacactgtatatggaaacggaagaggga
gaagaggagggcggcgcagaaaaagaggcagccaatcccgttcccgttctgcaagtcggg
gtacgggcacaagccgaacgtggcgaggtgctcaacaaatccaccaaggctccgccacga
ttcaccgaagccaccctgatcaaggcgctggaagatcatggcgtcggccggccaagcacc
tacgcatccatcatcaaggtgctctattcccgggagtacatgcagcgtaagggcaaggcc
tccgccttgtatccaacagcgacgggtgagtcggtcattgatgcgctggtcggacgcttt
gcctttgccgatctggactggacccgagagatggaagacgggctggatcagatcaccaac
ggggtgggtaatgcccgtggcctattgcagcaggcatgggatgcgattcagcaggggctg
gcgggtatgcccgccggtgccgttgcggaaaccgagcagtgcccggtagatgattgcggt
ggacaggtgaagcgtctggagagcacgaaaaagcctggttccttcttctgggcctgttcc
aatagggataagcacgggctgcttcaggatgatgagggtcatcccgggctgccttttgca
gaccggccccaggcggagtcccagggcacaggtccccagtgcccgaagtgcaaacaggct
acagggcaattcaccacgagcaccagcaagatttatttccgttgccagaagtgtagtggt
gcctggtggcccgacaaagaaaacgcgcaggcgttgggcaccaagtggaaaaaacagtga
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