Acidithiobacillus ferridurans: AFERRID_04620
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Entry
AFERRID_04620 CDS
T05847
Name
(GenBank) hypothetical protein
KO
K12990
rhamnosyltransferase [EC:2.4.1.-]
Organism
afj
Acidithiobacillus ferridurans
Pathway
afj02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
afj00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AFERRID_04620
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
afj01005
]
AFERRID_04620
Lipopolysaccharide biosynthesis proteins [BR:
afj01005
]
O-antigen repeat unit
AFERRID_04620
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_2
Glyco_tranf_2_3
Glyco_trans_2_3
Glyco_tranf_2_2
zf-Vps39_C
Motif
Other DBs
NCBI-ProteinID:
BBF64244
UniProt:
A0A2Z6IHF4
LinkDB
All DBs
Position
471258..472199
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AA seq
313 aa
AA seq
DB search
MNTSKVVPVDKSFIVAIIVTFNPDLVILSDVIEATWSQVQSVLVVDNGSGNNMSNWVASL
GKDNIHAISLQENRGIAAAQNVGIHWALQHGSGFVLLMDQDSIPEETMVNKLLLTFHDLK
NNENEKIAAIGPRFKDSKSGHLSKHVCFKRFGTSRIACKPGDRAVPVDFLIASGSLIESK
IFDTVGFMDEGLFIDHVDTEWILRARSKGYYAWGHCDAAMTHSLGESRVRLWIGRWRDIP
IHKPFRYYYVFRNSILIRRRDYPCSDWRRVDMIRLVQLFIFMVVFHPHRIRTLRMMFLGI
MHGLKGIEGPLTR
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgaacacttctaaggttgtcccagtcgacaaatccttcattgttgcaataatagtaaca
tttaatccagaccttgtgatattgtctgacgtgatagaggcgacatggtcacaagtccag
tcggtgctcgttgttgacaacggttccggcaacaatatgtctaactgggtggcatctttg
ggtaaagataatatccatgcaatttccttgcaagagaatcgtggtatcgctgcggcgcag
aatgtgggaattcattgggctttgcaacatggtagtgggtttgtccttctgatggatcaa
gacagtattcctgaggaaactatggttaataagttgctgcttacttttcatgacttgaaa
aataatgaaaatgaaaaaattgcagcaatagggccaagattcaaagatagcaagagtggg
catctttcgaaacatgtttgcttcaaaaggtttggtacgagccgtatagcatgcaagcca
ggagatcgcgcagtgcctgttgactttcttatcgcatccgggtccctaattgagtcgaag
atttttgatacagttggttttatggacgaagggttatttattgatcacgtcgatactgaa
tggatattgcgagctagatcaaaaggatattatgcatggggccattgcgatgctgctatg
acgcattccttaggtgaaagtcgtgtccgtttgtggattggtcgttggcgcgacattcct
attcataaaccctttcgatattattatgtttttcgcaatagtatacttattcggcgccgc
gattatccgtgttccgattggcggcgcgtcgatatgattagactcgtgcaactttttata
tttatggtcgtatttcatccgcaccgtattcggacgttacgcatgatgtttctaggaata
atgcatggcctgaagggaattgaggggccgttgacgagatga
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