Acidithiobacillus ferridurans: AFERRID_05260
Help
Entry
AFERRID_05260 CDS
T05847
Name
(GenBank) Peptidoglycan D,D-transpeptidase MrdA
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
afj
Acidithiobacillus ferridurans
Pathway
afj00550
Peptidoglycan biosynthesis
afj01100
Metabolic pathways
afj01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
afj00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
AFERRID_05260
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
AFERRID_05260
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
afj01011
]
AFERRID_05260
Enzymes [BR:
afj01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
AFERRID_05260
Peptidoglycan biosynthesis and degradation proteins [BR:
afj01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
AFERRID_05260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PBP_dimer_2
Abhydrolase_4
PQQ_2
Motif
Other DBs
NCBI-ProteinID:
BBF64308
UniProt:
A0A2Z6IF89
LinkDB
All DBs
Position
526474..528282
Genome browser
AA seq
602 aa
AA seq
DB search
MNAVQPAREHRQFTRRLLGAAGLITVLTALLAIQIFRLQVWDHDLYATQSTHNTIVLLPI
APQRGLILDRHGQILADDQTGFALTITPNKTMHPEETIQRLRRILPVSAEDQQRFNRDLL
HARPYQPILLRGNLSPGELAAFAVQRHQFPGVDIQTRIKRHYPYGSLFAHAVGYMGRLTP
AEIREEQMADYAGLDSIGKSGLEAQYETLLKGQPGDQEVEVDARGHTLRTRLRNPPRRGV
TIRTTLDLAVQQAAAKAMMGQQGAVVALDPRNGDVLAAYSAPAFDPNAFVDGLSTAVWSS
LRDDPGMPMANRFLRGSYPPGSTIKPFVALSALHDKAVAADQRLAGGAYYQIPGTKHKYY
DWKPGGHGAQNLREAIRDSNDVYFYQIAMRLGAIQLGNGLAHFGFGQRSGVDLPGESAGV
IPSPLWLRRRYGQTWYQGQTVIMGIGQGYLLSTPLQLARATASIANGGRLVIPHMKQSSG
SATQPLDFSPEDIAVIQGAMRDAVTSGTGKSLANDLHAIAGKTGTAQVHHAQRNDSGRVL
HDTIRLWQDHALFIAYAPADHPRIAVAVVVEHGGHGGSTAGPVARAVIDAYLNTLTTPEV
NS
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcagtacagcccgcccgggaacatcggcaattcacccgccgactgctgggcgcg
gcgggattgatcacggtgcttacggcgctgctggccatacagatattccggctgcaggtc
tgggatcacgatctctatgccacccaatccacccataacaccattgtgctgctgcccatc
gccccccagcgggggctgattcttgaccggcatgggcagatactcgccgatgatcagacc
ggcttcgccctaacgatcacgccgaacaaaaccatgcacccggaggaaaccatccagcgc
ctgcggcggatattgcccgtcagcgcagaggaccagcaacgcttcaaccgcgatctatta
catgcgcgtccctatcagcccattcttctgcgtggcaatctgagtcccggggagttggcc
gcatttgccgtgcagcgccatcaatttccgggggtggacatacaaacccggatcaaacgc
cactatccatatggttcacttttcgcccatgcagtgggctatatgggccgcctgacccca
gcagaaatccgcgaggagcagatggcggactacgcggggctggacagcatcggcaaaagc
ggccttgaggcgcagtatgaaaccctgctgaaagggcagccgggcgaccaggaggtagag
gtcgacgcacgcggacatacattacgcacacgcttgcgcaacccgccccggcggggcgta
accatccgaacgactctggatcttgcggtgcagcaggccgccgccaaggccatgatgggc
cagcagggcgccgtagtggcgctggatccgcggaatggtgacgtactcgccgcttattcg
gcccccgcgttcgatccaaatgctttcgtagatggcctgagcaccgccgtatggagcagc
ctgcgggacgatcccggcatgcccatggccaaccgctttctgcggggcagttatcctccg
ggctccaccatcaaaccttttgtggcactcagcgccctgcatgacaaggccgtcgccgct
gatcagcggctcgctggcggcgcttactaccagattcccggcaccaaacacaaatattac
gactggaaacccggtggtcatggtgcgcaaaatctgcgcgaagccattcgcgattccaat
gatgtgtatttttaccagattgccatgcgtcttggcgcaatccagctcggcaacggtctc
gcgcattttggctttggtcagcgcagtggagtggatttacctggggaatccgcgggtgtg
atcccctctccgctctggctacgtcggcgctacggccagacctggtatcagggacagacc
gtgataatgggaataggacagggttatctgctgagcaccccactccagttggcacgtgcc
acagcgagcatcgccaatggtggcagactggttattccgcatatgaaacaatcatccggc
agtgccacgcaacccctggatttttcaccagaggacattgccgtcattcagggtgcgatg
cgtgacgcggtgacttcggggaccggcaaatcactggccaacgacctccatgccattgcc
ggcaaaaccggcactgcccaggtgcaccatgcgcagcgtaatgattccggtcgggtgttg
cacgatacgattcgactttggcaggatcacgcactcttcatcgcctatgcgccggctgac
catccgcgcatcgccgtggcggtagtggtcgaacatggcggccatggaggcagcactgcc
gggcctgtcgcgagagcggttatcgacgcctacctcaatacattgacgacaccggaggtc
aattcatga
DBGET
integrated database retrieval system
