Acidithiobacillus ferridurans: AFERRID_10350
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Entry
AFERRID_10350 CDS
T05847
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
afj
Acidithiobacillus ferridurans
Brite
KEGG Orthology (KO) [BR:
afj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
afj03016
]
AFERRID_10350
Enzymes [BR:
afj01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
AFERRID_10350
Transfer RNA biogenesis [BR:
afj03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AFERRID_10350
Prokaryotic type
AFERRID_10350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
BBF64817
UniProt:
A0A2Z6IJG6
LinkDB
All DBs
Position
complement(1030319..1031407)
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AA seq
362 aa
AA seq
DB search
MSESLPRIYPAESGLLGAEMRQSPEDFQVTELLPFVPSGMGTHHWLVVEKRGLNTQDVAQ
RLARCAGVAVRDVGFAGLKDRQAVTRQSFTVPATAGSNPDWGSLEDDSLHFQQIGRHDRK
LRRGVLRGNHFQLTLRATTGAHSLWDARLQILLKRGFPNYFGAQRFGHRNLQEAARLLSG
QPMRVDRHRRGLLWSAARSALFNLVLAERVRHANWTEILPGEVVQLAGSHSIFLAEEDDL
ADLQARAAEWDLHPTGPLPGRGGLAPTLVAAALETSALGAGPVIAGTTDDGLHWARRLAE
QGLDAARRPLRARPENLSGRWEDVQTLILSFSLPAGVFATSCVEGLLGREMAEAQGLDHC
VD
NT seq
1089 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaagtctgccgcgcatctaccccgcagagagcggtctgctgggcgccgaaatg
aggcagtctccagaagactttcaggtcacggaattgctgccttttgtcccatccggtatg
ggtacccatcactggctggtagtggagaaacgcggcctcaatacgcaggatgtggcccag
cgtctggcgcgttgtgccggggtggcggtccgggatgtgggttttgccggtctcaaggac
cgtcaagctgttacccggcagagttttacggtgccggctacggcgggtagcaacccggat
tggggcagtctggaagacgacagtctgcactttcagcagatcggccgccatgaccgtaaa
ttacgtcggggcgtgttacgtggcaaccactttcaactcactttgcgcgccaccacggga
gcacacagtctctgggacgcccgcctgcaaattctcctgaaacgagggttccccaactat
ttcggtgcccagcgcttcgggcaccgaaatttgcaagaggccgcgcgactgttatccgga
cagccgatgcgggtagaccgccatcggcgcggcctgctctggtccgcggcccgctccgcc
ctgttcaatctggtcctcgccgagcgggtgcggcatgccaactggacggagattctgccg
ggtgaagtcgtgcaactggctggctcgcacagtatttttctggcggaggaggacgatctc
gcggatttgcaggcgcgcgccgctgaatgggacctgcatcccaccggccccttaccaggt
cgtggcgggttggcgccgaccctggttgccgccgcactggagacctcggccctgggcgcg
gggccggtcatcgccggtacaacagacgatggcctccattgggcacgacgtcttgcagaa
caagggctagacgctgcccggcgtcccttgcgcgcgcgtccggagaacctcagcggccgc
tgggaggatgtacaaaccctgattctgagtttttccctccccgcgggcgtattcgcgacg
agttgtgtggaaggccttttggggagggaaatggcggaagcgcaaggccttgaccattgt
gttgactag
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