Acidithiobacillus ferridurans: AFERRID_12960
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Entry
AFERRID_12960 CDS
T05847
Name
(GenBank) Ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
afj
Acidithiobacillus ferridurans
Brite
KEGG Orthology (KO) [BR:
afj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
afj03009
]
AFERRID_12960
Enzymes [BR:
afj01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
AFERRID_12960
Ribosome biogenesis [BR:
afj03009
]
Prokaryotic type
ribosomal protein modification factors
AFERRID_12960
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
DUF5666
Motif
Other DBs
NCBI-ProteinID:
BBF65078
UniProt:
A0A2Z6IH91
LinkDB
All DBs
Position
1260412..1261740
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AA seq
442 aa
AA seq
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MKKIPSIGVVSLGCPKATVDSERILTRLRAEGYLLVGDYASADVVVVNTCGFIDAAVEES
LEAIGEALDENGKVVVTGCLGAREGGDFVRGAHPKVLAVTGPNQADAVLDAIHEALPAAH
DPYTDLVPPQGLRLTPPHYAYLKISEGCNQSCSFCIIPSMRGKLVSRAPDDILREAEALV
AGGAKELLVISQDTGAYGVDRKYRTAFHNGRPLKARITDLCAALGELGVWVRLHYVYPYP
HIDELLPLMAAGKILPYLDVPLQHGSPRILKAMRRPAAAEKTLDRILGWRQAVPDLTIRS
TFIVGFPGETDADFAVLLDFLRAAELDRVGCFAYSAVEGAPANAIAGAVPEPVKEERRAA
FMAVQEAISRQRLQRRVGQRQRMLVDAVGRSGKITARSASDAPEIDGVVHLGKAAGLKVG
DWVEVEISRADAHDLYGMVVSA
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaattcctagtataggtgtagtatctctcgggtgcccgaaggccacggtagac
agcgagcgcatccttactcggttgcgcgccgagggctatctgctggtgggggattacgcc
agcgccgatgtggtcgtcgtcaatacctgcggctttatcgacgcggcggtggaggaatcc
ctggaggccatcggcgaggcgctggatgagaacggcaaggtggtggtcaccggttgcctg
ggtgcccgcgagggcggcgactttgtgcgcggcgcccatcccaaggtgcttgccgtcacc
ggccccaaccaggccgatgccgtgctcgacgcgattcacgaggcgctccctgcggcccac
gatccctacaccgatctggtgccgccccagggcctacgcctgacgccgccccactatgcc
tacctcaaaatctccgagggctgcaatcagtcctgtagtttctgcatcattcccagcatg
cgcggcaaactggtcagccgcgcgccggacgatattctgcgcgaggccgaagcgctggtg
gccggtggcgccaaagaactgctggtgatctcccaggataccggggcttacggggtggac
cgcaaataccgcaccgcctttcacaacggccgcccgctcaaggcccgcatcaccgatctc
tgcgcggccctgggggaactcggcgtctgggtgcgtctgcactacgtctacccctacccg
catattgacgaactcctgcccctgatggcggctggcaaaattctgccctatctggatgtg
cccctgcagcacggcagcccgcgcatcctcaaggccatgcgccgccccgccgccgccgaa
aagaccctcgaccggattctcggctggcgccaggcggtgccggacctgaccatccgcagc
accttcatcgtcggcttccccggcgagaccgatgcggactttgcggtattactggatttt
ctgcgtgcggcagagctggatcgtgtcggttgtttcgcctattccgcagtagaaggtgcg
cccgccaacgcgatcgccggagcggtgccggagccggtcaaagaggaacgccgcgccgca
ttcatggccgtgcaggaagccatcagccgccagcggctacaacgccgggtaggccagcgt
cagcgcatgctggtggacgctgtgggccggagcggcaaaatcaccgcccgctccgccagc
gatgccccggagatcgatggtgtggtgcatctgggcaaagccgcggggttgaaggtcggg
gactgggtggaggtggagatcagccgggcggatgcccatgatttgtacgggatggtggtg
tcggcctga
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